| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g06388 | 5:239,621-241,653 | - | C2H5g28590 | CX5g037105 | LOC_Os05g01460 | Os05g0104900 | - | Detail |
| C1H5g26578 | 5:241,669-241,863 | - | C2H5g05719 | - | LOC_Os05g01460 | Os05g0104900 | - | Detail |
| C1H5g15502 | 5:244,724-251,452 | - | C2H5g19730 | CX5g039500 | LOC_Os05g01470 | Os05g0105000 | - | Detail |
| C1H5g16617 | 5:254,952-255,242 | - | C2H5g26084 | CX5g039500 | LOC_Os05g01470 | Os05g0105050 | - | Detail |
| C1H5g16600 | 5:260,462-262,434 | + | C2H5g10354 | CX5g038808 | LOC_Os05g01480 | Os05g0105100 | - | Detail |
| C1H5g21241 | 5:262,996-265,882 | - | C2H5g19903 | CX5g039969 | LOC_Os05g01490 | Os05g0105200 | - | Detail |
| C1H5g18202 | 5:266,776-272,585 | + | C2H5g06326 | CX5g037023 | LOC_Os05g01500 | Os05g0105300 | - | Detail |
| C1H5g18772 | 5:276,848-278,912 | + | C2H5g11579 | CX5g037590 | LOC_Os05g01510 | Os05g0105500 | - | Detail |
| C1H5g25622 | 5:279,491-286,472 | - | C2H5g20280 | CX5g039765 | LOC_Os05g01520 | Os05g0105600 | - | Detail |
| C1H5g19196 | 5:287,940-288,826 | + | C2H5g02633 | - | LOC_Os05g01530 | Os05g0105800 | - | Detail |
| C1H5g01452 | 5:292,101-295,754 | + | C2H5g03024 | CX5g037960 | LOC_Os05g01540 | Os05g0105900 | OsSR45a | Detail |
| C1H5g05022 | 5:296,100-299,352 | - | C2H5g12749 | CX5g040576 | LOC_Os05g01550 | Os05g0106000 | - | Detail |
| C1H5g03893 | 5:300,774-304,253 | - | C2H11g21238 | CX5g037087 | LOC_Os05g01560 | Os05g0106100 | - | Detail |
| C1H5g16852 | 5:323,052-324,718 | + | C2H5g26492 | CX5g036731 | LOC_Os05g01570 | Os05g0106200 | - | Detail |
| C1H5g10447 | 5:329,510-331,487 | + | C2H5g17692 | CX5g039978 | LOC_Os05g01580 | Os05g0106300 | - | Detail |
| C1H5g13600 | 5:334,944-337,066 | + | C2H5g25349 | CX5g037306 | LOC_Os05g01590 | Os05g0106500 | - | Detail |
| C1H5g15826 | 5:337,507-339,933 | - | C2H5g17036 | CX5g038738 | LOC_Os05g01600 | Os05g0106600 | - | Detail |
| C1H5g29092 | 5:344,265-349,406 | + | C2H5g10782 | CX5g040890 | LOC_Os05g01610 | Os05g0106700 | - | Detail |
| C1H5g02832 | 5:350,175-351,892 | - | C2H5g23625 | CX5g037947 | LOC_Os05g01620 | Os05g0106800 | - | Detail |
| C1H5g31140 | 5:352,958-354,755 | - | C2H5g06027 | CX5g038077 | LOC_Os05g01635 | Os05g0107000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g01836 | 3:30,924,677-30,926,561 | - | C1H3g13091 | CX3g028432 | LOC_Os03g59360 | Os03g0808300 | - | Detail |
| C2H3g03811 | 3:30,930,428-30,931,159 | - | C1H3g25091 | CX3g025805 | LOC_Os03g59370 | Os03g0808400 | - | Detail |
| C2H3g04526 | 3:30,939,184-30,943,566 | + | C1H3g20305 | CX3g024996 | LOC_Os03g59390 | Os03g0808600 | OsCPK8 | Detail |
| C2H3g07709 | 3:30,948,608-30,953,298 | + | C1H3g10123 | CX3g029969 | LOC_Os03g59430 | Os03g0808900 | - | Detail |
| C2H3g29438 | 3:30,956,818-30,960,535 | - | C1H3g21680 | CX3g025915 | LOC_Os03g59450 | Os03g0809100 | - | Detail |
| C2H3g20629 | 3:30,961,716-30,964,098 | + | C1H3g00029 | CX3g029386 | LOC_Os03g59460 | Os03g0809200 | - | Detail |
| C2H3g29142 | 3:30,964,838-30,968,457 | - | C1H3g24410 | CX3g030061 | LOC_Os03g59470 | Os03g0809300 | - | Detail |
| C2H3g26798 | 3:30,968,936-30,973,688 | - | C1H3g00154 | CX3g026207 | LOC_Os03g59480 | Os03g0809400 | - | Detail |
| C2H3g14868 | 3:30,978,800-30,983,598 | + | C1H3g24704 | CX3g029129 | LOC_Os03g59530 | Os03g0809700 | - | Detail |
| C2H3g12384 | 3:30,984,222-30,986,692 | - | C1H3g10761 | CX3g029771 | LOC_Os03g59540 | Os03g0809800 | - | Detail |
| C2H3g15000 | 3:30,987,085-30,991,814 | + | C1H3g08226 | CX3g027672 | LOC_Os03g59550 | Os03g0809900 | OsY14b, Y14b, Tsunagi, RBM8 | Detail |
| C2H3g26577 | 3:30,998,064-30,999,122 | + | C1H3g24094 | CX3g030604 | LOC_Os03g59570 | Os03g0810100 | - | Detail |
| C2H3g13200 | 3:31,010,565-31,012,991 | - | C1H3g21092 | CX3g027297 | LOC_Os03g59580 | Os03g0810300 | - | Detail |
| C2H3g12399 | 3:31,020,813-31,026,983 | - | C1H3g11302 | CX3g028362 | LOC_Os03g59590 | Os03g0810600 | - | Detail |
| C2H3g16986 | 3:31,034,680-31,036,544 | - | C1H3g11617 | CX3g030481 | LOC_Os03g59600 | Os03g0810700 | - | Detail |
| C2H3g19706 | 3:31,037,417-31,039,340 | + | C1H3g30674 | CX3g028870 | LOC_Os03g59610 | Os03g0810800 | OsABA2 | Detail |
| C2H3g30149 | 3:31,039,694-31,043,993 | - | C1H3g01412 | CX3g027301 | LOC_Os03g59620 | Os03g0810900 | - | Detail |
| C2H3g14154 | 3:31,045,868-31,052,528 | + | C1H3g18901 | CX3g030819 | LOC_Os03g59640 | Os03g0811100 | - | Detail |
| C2H3g24154 | 3:31,053,028-31,058,031 | + | C1H3g26787 | CX3g031200 | LOC_Os03g59650 | Os03g0811200 | - | Detail |
| C2H3g07522 | 3:31,061,059-31,063,061 | + | C1H3g09735 | CX3g028699 | LOC_Os03g59660 | Os03g0811300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |