| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g01547 | 5:106,399-109,185 | - | C2H5g11548 | CX5g038525 | LOC_Os05g01120 | Os05g0101600 | - | Detail |
| C1H5g21429 | 5:128,582-132,259 | + | C2H5g11343 | CX5g040553 | LOC_Os05g01190 | Os05g0102300 | - | Detail |
| C1H5g12210 | 5:133,279-134,049 | + | C2H5g29002 | CX5g038962 | LOC_Os05g01200 | Os05g0102400 | - | Detail |
| C1H5g24021 | 5:134,669-136,790 | - | C2H5g25831 | CX5g039033 | LOC_Os05g01210 | Os05g0102500 | - | Detail |
| C1H5g11428 | 5:140,057-144,954 | + | C2H5g09707 | CX5g037244 | LOC_Os05g01230 | Os05g0102600 | - | Detail |
| C1H5g05413 | 5:145,472-153,356 | - | C2H5g01721 | CX5g038484 | LOC_Os05g01240 | Os05g0102800 | - | Detail |
| C1H5g16359 | 5:163,068-165,978 | + | C2H5g05131 | CX5g040550 | LOC_Os05g01250 | Os05g0102900 | - | Detail |
| C1H5g27377 | 5:168,084-170,171 | - | C2H5g28008 | CX5g037761 | LOC_Os05g01256 | Os05g0103000 | - | Detail |
| C1H5g28308 | 5:171,065-173,451 | - | C2H5g14971 | CX5g038148 | LOC_Os05g01262 | Os05g0103100 | - | Detail |
| C1H5g30548 | 5:174,490-176,978 | + | C2H5g18349 | CX5g039900 | LOC_Os05g01270 | Os05g0103200 | - | Detail |
| C1H5g25959 | 5:192,316-196,149 | - | C2H5g25073 | CX5g040155 | LOC_Os05g01310 | Os05g0103600 | - | Detail |
| C1H5g00386 | 5:196,952-200,155 | - | C2H5g19367 | CX5g037279 | LOC_Os05g01320 | Os05g0103700 | - | Detail |
| C1H5g16700 | 5:202,479-203,950 | - | C2H5g05200 | CX5g037112 | LOC_Os05g01330 | Os05g0103800 | - | Detail |
| C1H5g29606 | 5:207,204-211,349 | + | C2H5g18611 | CX5g040057 | LOC_Os05g01350 | Os05g0104000 | - | Detail |
| C1H5g00400 | 5:212,621-220,033 | + | C2H5g24643 | CX5g040235 | LOC_Os05g01360 | Os05g0104100 | - | Detail |
| C1H5g15746 | 5:220,707-221,741 | + | C2H5g21529 | CX5g038227 | LOC_Os05g01370 | Os05g0104150 | PGIP2, Ospgip2, pgip2, OsPGIP2 | Detail |
| C1H5g23583 | 5:223,602-224,531 | + | C2H5g16478 | CX5g038227 | LOC_Os05g01380 | Os05g0104200 | PGIP1, Ospgip1, pgip1, OsPGIP1 | Detail |
| C1H5g17625 | 5:225,013-226,041 | + | C2H5g22812 | CX5g038227 | LOC_Os05g01430 | Os05g0104600 | PGIP3, Ospgip3, pgip3, OsPGIP3 | Detail |
| C1H5g17368 | 5:227,835-233,750 | + | C2H5g01578 | CX5g038022 | LOC_Os05g01440 | Os05g0104650 | - | Detail |
| C1H5g26046 | 5:236,309-238,447 | - | C2H5g13110 | CX5g039427 | LOC_Os05g01450 | Os05g0104800 | EIF3F, eIF-3f, OseIF3f | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g01746 | 3:629,398-638,612 | + | C1H3g18565 | CX3g028339 | LOC_Os03g02320 | Os03g0114300 | - | Detail |
| C2H3g18646 | 3:641,605-643,164 | - | C1H3g10649 | CX3g029614 | LOC_Os03g02330 | Os03g0114400 | - | Detail |
| C2H3g04046 | 3:653,017-657,028 | + | C1H3g22597 | CX3g027583 | LOC_Os03g02380 | Os03g0114800 | - | Detail |
| C2H3g22633 | 3:659,032-659,616 | - | C1H3g14435 | CX3g025748 | LOC_Os03g02390 | Os03g0114900 | - | Detail |
| C2H3g26464 | 3:661,149-661,973 | + | C1H3g27376 | CX3g030673 | LOC_Os03g02400 | Os03g0115000 | - | Detail |
| C2H3g20722 | 3:662,617-667,692 | - | C1H3g17339 | CX3g029693 | LOC_Os03g02410 | Os03g0115100 | - | Detail |
| C2H3g13923 | 3:668,975-670,502 | - | C1H3g13483 | CX3g027454 | LOC_Os03g02420 | Os03g0115200 | - | Detail |
| C2H3g21090 | 3:677,730-680,411 | - | C1H3g13601 | CX3g030326 | LOC_Os03g02430 | Os03g0115300 | - | Detail |
| C2H3g04722 | 3:689,264-694,090 | + | C1H3g19300 | CX3g026894 | LOC_Os03g02440 | Os03g0115400 | - | Detail |
| C2H3g02456 | 3:696,912-698,726 | + | C1H3g29650 | - | LOC_Os03g02450 | Os03g0115500 | - | Detail |
| C2H3g18631 | 3:703,115-704,885 | - | C1H3g23217 | CX3g027733 | LOC_Os03g02460 | Os03g0115700 | - | Detail |
| C2H3g08520 | 3:717,522-721,435 | + | C1H3g20096 | CX3g027934 | LOC_Os03g02480 | Os03g0116000 | - | Detail |
| C2H3g18720 | 3:728,945-734,750 | + | C1H3g02353 | CX3g030191 | LOC_Os03g02514 | Os03g0116300 | - | Detail |
| C2H3g12526 | 3:738,035-740,502 | + | C1H3g28919 | CX3g025863 | LOC_Os03g02530 | Os03g0116400 | - | Detail |
| C2H3g29694 | 3:740,929-744,964 | - | C1H3g00538 | CX3g025869 | LOC_Os03g02540 | Os03g0116500 | OsCSN1 | Detail |
| C2H3g29079 | 3:749,031-750,555 | + | C1H3g22420 | CX3g029631 | LOC_Os03g02550 | Os03g0116700 | - | Detail |
| C2H3g17551 | 3:751,834-755,048 | + | C1H3g28877 | CX3g027406 | LOC_Os03g02560 | Os03g0116800 | - | Detail |
| C2H3g02337 | 3:756,764-759,583 | - | C1H3g25055 | CX3g025851 | LOC_Os03g02690 | Os03g0118600 | - | Detail |
| C2H3g25975 | 3:759,593-764,166 | + | C1H3g30074 | CX3g030823 | LOC_Os03g02580 | Os03g0116900 | - | Detail |
| C2H3g27471 | 3:764,786-766,112 | - | C1H3g17178 | CX3g027445 | LOC_Os03g02590 | Os03g0117100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |