| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g01547 | 5:106,399-109,185 | - | C2H5g11548 | CX5g038525 | LOC_Os05g01120 | Os05g0101600 | - | Detail |
| C1H5g21429 | 5:128,582-132,259 | + | C2H5g11343 | CX5g040553 | LOC_Os05g01190 | Os05g0102300 | - | Detail |
| C1H5g12210 | 5:133,279-134,049 | + | C2H5g29002 | CX5g038962 | LOC_Os05g01200 | Os05g0102400 | - | Detail |
| C1H5g24021 | 5:134,669-136,790 | - | C2H5g25831 | CX5g039033 | LOC_Os05g01210 | Os05g0102500 | - | Detail |
| C1H5g11428 | 5:140,057-144,954 | + | C2H5g09707 | CX5g037244 | LOC_Os05g01230 | Os05g0102600 | - | Detail |
| C1H5g05413 | 5:145,472-153,356 | - | C2H5g01721 | CX5g038484 | LOC_Os05g01240 | Os05g0102800 | - | Detail |
| C1H5g16359 | 5:163,068-165,978 | + | C2H5g05131 | CX5g040550 | LOC_Os05g01250 | Os05g0102900 | - | Detail |
| C1H5g27377 | 5:168,084-170,171 | - | C2H5g28008 | CX5g037761 | LOC_Os05g01256 | Os05g0103000 | - | Detail |
| C1H5g28308 | 5:171,065-173,451 | - | C2H5g14971 | CX5g038148 | LOC_Os05g01262 | Os05g0103100 | - | Detail |
| C1H5g30548 | 5:174,490-176,978 | + | C2H5g18349 | CX5g039900 | LOC_Os05g01270 | Os05g0103200 | - | Detail |
| C1H5g25959 | 5:192,316-196,149 | - | C2H5g25073 | CX5g040155 | LOC_Os05g01310 | Os05g0103600 | - | Detail |
| C1H5g00386 | 5:196,952-200,155 | - | C2H5g19367 | CX5g037279 | LOC_Os05g01320 | Os05g0103700 | - | Detail |
| C1H5g16700 | 5:202,479-203,950 | - | C2H5g05200 | CX5g037112 | LOC_Os05g01330 | Os05g0103800 | - | Detail |
| C1H5g29606 | 5:207,204-211,349 | + | C2H5g18611 | CX5g040057 | LOC_Os05g01350 | Os05g0104000 | - | Detail |
| C1H5g00400 | 5:212,621-220,033 | + | C2H5g24643 | CX5g040235 | LOC_Os05g01360 | Os05g0104100 | - | Detail |
| C1H5g15746 | 5:220,707-221,741 | + | C2H5g21529 | CX5g038227 | LOC_Os05g01370 | Os05g0104150 | PGIP2, Ospgip2, pgip2, OsPGIP2 | Detail |
| C1H5g23583 | 5:223,602-224,531 | + | C2H5g16478 | CX5g038227 | LOC_Os05g01380 | Os05g0104200 | PGIP1, Ospgip1, pgip1, OsPGIP1 | Detail |
| C1H5g17625 | 5:225,013-226,041 | + | C2H5g22812 | CX5g038227 | LOC_Os05g01430 | Os05g0104600 | PGIP3, Ospgip3, pgip3, OsPGIP3 | Detail |
| C1H5g17368 | 5:227,835-233,750 | + | C2H5g01578 | CX5g038022 | LOC_Os05g01440 | Os05g0104650 | - | Detail |
| C1H5g26046 | 5:236,309-238,447 | - | C2H5g13110 | CX5g039427 | LOC_Os05g01450 | Os05g0104800 | EIF3F, eIF-3f, OseIF3f | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g15283 | 1:7,809,141-7,814,353 | - | C1H1g11696 | CX1g001399 | LOC_Os01g15460 | Os01g0258700 | - | Detail |
| C2H1g09950 | 1:7,831,353-7,835,827 | + | C1H1g20506 | CX1g003110 | LOC_Os01g15470 | Os01g0259200 | - | Detail |
| C2H1g28752 | 1:7,839,649-7,847,498 | - | C1H1g17517 | CX1g001265 | LOC_Os01g15480 | Os01g0259400 | - | Detail |
| C2H1g29310 | 1:7,848,020-7,855,689 | - | C1H1g01918 | CX1g004135 | LOC_Os01g15490 | Os01g0259600 | - | Detail |
| C2H1g13360 | 1:7,865,841-7,869,695 | + | C1H1g28512 | CX1g001587 | LOC_Os01g15520 | Os01g0259900 | SAD1L | Detail |
| C2H1g29005 | 1:7,881,621-7,883,132 | + | C1H1g06480 | CX1g001422 | LOC_Os01g15530 | Os01g0260000 | - | Detail |
| C2H1g27356 | 1:7,883,984-7,890,551 | - | C1H1g08431 | CX1g003982 | LOC_Os01g15540 | Os01g0260100 | - | Detail |
| C2H1g20732 | 1:7,898,552-7,902,451 | + | C1H1g24472 | CX1g000418 | LOC_Os01g15580 | Os01g0260500 | - | Detail |
| C2H1g27729 | 1:7,908,196-7,911,965 | + | C1H1g25542 | CX1g006574 | LOC_Os01g15600 | Os01g0260700 | OsPurα | Detail |
| C2H1g08136 | 1:7,915,914-7,921,724 | + | C1H1g03478 | CX1g004819 | LOC_Os01g15610 | Os01g0260800 | OsCIF2 | Detail |
| C2H1g00172 | 1:7,925,619-7,926,041 | + | - | - | - | Os01g0260950 | - | Detail |
| C2H1g02816 | 1:7,928,299-7,934,071 | + | C1H1g30736 | CX1g004757 | LOC_Os01g15630 | Os01g0261100 | - | Detail |
| C2H1g13520 | 1:7,934,395-7,938,688 | - | C1H1g05155 | CX1g003663 | LOC_Os01g15640 | Os01g0261200 | - | Detail |
| C2H1g20114 | 1:7,943,990-7,947,448 | + | C1H1g07642 | CX1g001002 | LOC_Os01g15660 | Os01g0261500 | - | Detail |
| C2H1g06642 | 1:7,949,906-7,951,357 | - | C1H1g29935 | CX1g006778 | LOC_Os01g15709 | Os01g0261700 | - | Detail |
| C2H1g12900 | 1:7,954,014-7,955,420 | - | C1H1g11248 | CX1g000782 | LOC_Os01g15709 | Os01g0261700 | - | Detail |
| C2H1g12284 | 1:7,961,586-7,962,748 | - | C1H1g21194 | CX1g006778 | LOC_Os01g15709 | Os01g0261700 | - | Detail |
| C2H1g07674 | 1:7,977,804-7,979,718 | + | C1H1g29482 | CX1g000618 | LOC_Os01g15770 | Os01g0262500 | - | Detail |
| C2H1g00956 | 1:7,979,872-7,985,777 | - | C1H1g02857 | CX1g004525 | LOC_Os01g15780 | Os01g0262600 | OsGT1 | Detail |
| C2H1g29692 | 1:7,988,537-7,995,739 | + | C1H1g17535 | CX1g007017 | LOC_Os01g15790 | Os01g0262700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |