| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g16733 | 1:21,638,112-21,645,972 | - | C2H1g00179 | CX1g006178 | LOC_Os01g42410 | Os01g0609900 | - | Detail |
| C1H1g07824 | 1:21,658,659-21,661,150 | + | C2H1g12978 | CX1g000446 | LOC_Os01g42430 | Os01g0610100 | - | Detail |
| C1H1g31299 | 1:21,666,919-21,671,985 | + | C2H1g15549 | CX1g000122 | LOC_Os01g42460 | Os01g0610300 | OsASI1, OsIBM2 | Detail |
| C1H1g17082 | 1:21,675,535-21,678,217 | + | C2H1g30233 | CX1g001787 | LOC_Os01g42470 | Os01g0610400 | - | Detail |
| C1H1g00950 | 1:21,686,172-21,689,272 | - | C2H1g01156 | CX1g004113 | LOC_Os01g42480 | Os01g0610500 | - | Detail |
| C1H1g10040 | 1:21,690,784-21,698,002 | - | C2H1g27976 | CX1g006192 | LOC_Os01g42490 | Os01g0610600 | - | Detail |
| C1H1g07937 | 1:21,698,672-21,701,638 | - | C2H1g11351 | CX1g001957 | LOC_Os01g42500 | Os01g0610700 | - | Detail |
| C1H1g20514 | 1:21,703,483-21,707,322 | - | C2H1g18697 | CX1g001059 | LOC_Os01g42510 | Os01g0610800 | - | Detail |
| C1H1g12371 | 1:21,714,358-21,717,229 | - | - | - | - | - | - | Detail |
| C1H1g18308 | 1:21,753,656-21,756,617 | + | C2H1g27995 | CX1g003691 | LOC_Os01g42520 | Os01g0611000 | - | Detail |
| C1H1g31223 | 1:21,759,523-21,761,692 | + | C2H1g28850 | CX1g007042 | LOC_Os01g37800 | Os01g0611100 | OsRAN1 | Detail |
| C1H1g01107 | 1:21,763,449-21,764,815 | - | C2H1g16163 | CX1g000611 | LOC_Os01g42540 | - | - | Detail |
| C1H1g13509 | 1:21,775,742-21,778,599 | + | C2H1g24169 | CX1g002511 | LOC_Os01g42610 | Os01g0337100 | OsTPS1 | Detail |
| C1H1g26944 | 1:21,782,381-21,784,798 | - | C2H1g29383 | CX1g003287 | LOC_Os01g42620 | Os01g0611900 | - | Detail |
| C1H1g21989 | 1:21,785,625-21,789,061 | - | C2H1g14636 | CX1g005532 | LOC_Os01g42630 | Os01g0612000 | - | Detail |
| C1H1g24195 | 1:21,793,520-21,797,435 | + | C2H1g23201 | CX1g005764 | LOC_Os01g42650 | Os01g0612200 | - | Detail |
| C1H1g12693 | 1:21,827,806-21,830,455 | + | C2H1g08682 | CX1g006516 | LOC_Os01g42690 | Os01g0612500 | - | Detail |
| C1H1g19005 | 1:21,840,986-21,847,885 | + | C2H1g20504 | CX1g005902 | LOC_Os01g42710 | Os01g0612700 | LOL2, OsLOL2, OsLOL5 | Detail |
| C1H1g28272 | 1:21,848,607-21,849,535 | + | C2H1g10217 | CX1g003214 | LOC_Os01g42720 | Os01g0612800 | - | Detail |
| C1H1g20054 | 1:21,862,569-21,866,675 | + | C2H1g19518 | CX1g000139 | LOC_Os01g42730 | Os01g0612900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H12g06061 | 12:1,857,148-1,859,427 | + | C1H12g31125 | CX12g018621 | LOC_Os12g04650 | Os12g0140600 | - | Detail |
| C2H12g11552 | 12:1,874,786-1,878,349 | - | C1H12g27391 | CX12g016459 | LOC_Os12g04700 | Os12g0141100 | - | Detail |
| C2H12g08107 | 12:1,889,996-1,891,379 | - | - | - | - | - | - | Detail |
| C2H12g27853 | 12:1,894,300-1,895,080 | - | C1H12g26478 | CX12g018041 | LOC_Os12g04720 | Os12g0141400 | - | Detail |
| C2H12g26074 | 12:1,897,051-1,897,794 | - | C1H12g21661 | CX12g017803 | LOC_Os12g04740 | Os12g0141500 | - | Detail |
| C2H12g19377 | 12:1,900,749-1,901,124 | - | C1H12g04993 | CX12g017719 | - | Os12g0141600 | - | Detail |
| C2H12g09406 | 12:1,901,701-1,905,907 | - | C1H12g30941 | CX12g017719 | LOC_Os12g04750 | Os12g0141600 | - | Detail |
| C2H12g13165 | 12:1,914,987-1,921,639 | - | C1H12g04512 | CX12g017921 | - | Os12g0141900 | - | Detail |
| C2H12g15017 | 12:1,956,232-1,957,008 | - | C1H11g09875 | CX11g013962 | LOC_Os12g04860 | Os12g0142600 | - | Detail |
| C2H12g17505 | 12:1,977,536-1,980,723 | + | C1H12g23605 | CX12g015488 | LOC_Os12g04930 | Os12g0143200 | OsASHL1 | Detail |
| C2H12g04572 | 12:1,983,139-1,983,474 | - | C1H12g20952 | CX12g018267 | LOC_Os12g04934 | Os12g0143300 | - | Detail |
| C2H12g15233 | 12:1,985,066-1,992,778 | - | C1H12g29028 | CX12g016016 | LOC_Os12g04940 | Os12g0143400 | - | Detail |
| C2H12g29588 | 12:1,994,567-1,995,093 | - | C1H12g22085 | - | - | - | - | Detail |
| C2H12g30125 | 12:2,006,829-2,010,969 | - | C1H12g20218 | CX12g015864 | LOC_Os12g04980 | Os12g0143800 | DMC1A, OsDMC1A, OsDmc1A, Dmc1A, DMC1, OsDMC1, RiLIM15A | Detail |
| C2H12g21227 | 12:2,015,128-2,022,805 | - | C1H12g18494 | CX12g016038 | LOC_Os12g04990 | Os12g0143900 | - | Detail |
| C2H12g14580 | 12:2,028,137-2,031,470 | + | C1H12g14180 | CX12g018054 | LOC_Os12g05000 | Os12g0144000 | - | Detail |
| C2H12g26458 | 12:2,034,143-2,037,356 | + | C1H12g00146 | CX12g015780 | LOC_Os12g05010 | Os12g0144200 | - | Detail |
| C2H12g10724 | 12:2,055,648-2,058,536 | + | C1H12g05256 | CX12g018220 | LOC_Os12g05040 | Os12g0144600 | - | Detail |
| C2H12g16995 | 12:2,078,700-2,081,848 | - | C1H12g22183 | CX12g015697 | LOC_Os12g05050 | Os12g0145100 | - | Detail |
| C2H12g10193 | 12:2,092,537-2,095,579 | + | C1H12g30331 | CX12g015693 | LOC_Os12g05080 | Os12g0145400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |