| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g16733 | 1:21,638,112-21,645,972 | - | C2H1g00179 | CX1g006178 | LOC_Os01g42410 | Os01g0609900 | - | Detail |
| C1H1g07824 | 1:21,658,659-21,661,150 | + | C2H1g12978 | CX1g000446 | LOC_Os01g42430 | Os01g0610100 | - | Detail |
| C1H1g31299 | 1:21,666,919-21,671,985 | + | C2H1g15549 | CX1g000122 | LOC_Os01g42460 | Os01g0610300 | OsASI1, OsIBM2 | Detail |
| C1H1g17082 | 1:21,675,535-21,678,217 | + | C2H1g30233 | CX1g001787 | LOC_Os01g42470 | Os01g0610400 | - | Detail |
| C1H1g00950 | 1:21,686,172-21,689,272 | - | C2H1g01156 | CX1g004113 | LOC_Os01g42480 | Os01g0610500 | - | Detail |
| C1H1g10040 | 1:21,690,784-21,698,002 | - | C2H1g27976 | CX1g006192 | LOC_Os01g42490 | Os01g0610600 | - | Detail |
| C1H1g07937 | 1:21,698,672-21,701,638 | - | C2H1g11351 | CX1g001957 | LOC_Os01g42500 | Os01g0610700 | - | Detail |
| C1H1g20514 | 1:21,703,483-21,707,322 | - | C2H1g18697 | CX1g001059 | LOC_Os01g42510 | Os01g0610800 | - | Detail |
| C1H1g12371 | 1:21,714,358-21,717,229 | - | - | - | - | - | - | Detail |
| C1H1g18308 | 1:21,753,656-21,756,617 | + | C2H1g27995 | CX1g003691 | LOC_Os01g42520 | Os01g0611000 | - | Detail |
| C1H1g31223 | 1:21,759,523-21,761,692 | + | C2H1g28850 | CX1g007042 | LOC_Os01g37800 | Os01g0611100 | OsRAN1 | Detail |
| C1H1g01107 | 1:21,763,449-21,764,815 | - | C2H1g16163 | CX1g000611 | LOC_Os01g42540 | - | - | Detail |
| C1H1g13509 | 1:21,775,742-21,778,599 | + | C2H1g24169 | CX1g002511 | LOC_Os01g42610 | Os01g0337100 | OsTPS1 | Detail |
| C1H1g26944 | 1:21,782,381-21,784,798 | - | C2H1g29383 | CX1g003287 | LOC_Os01g42620 | Os01g0611900 | - | Detail |
| C1H1g21989 | 1:21,785,625-21,789,061 | - | C2H1g14636 | CX1g005532 | LOC_Os01g42630 | Os01g0612000 | - | Detail |
| C1H1g24195 | 1:21,793,520-21,797,435 | + | C2H1g23201 | CX1g005764 | LOC_Os01g42650 | Os01g0612200 | - | Detail |
| C1H1g12693 | 1:21,827,806-21,830,455 | + | C2H1g08682 | CX1g006516 | LOC_Os01g42690 | Os01g0612500 | - | Detail |
| C1H1g19005 | 1:21,840,986-21,847,885 | + | C2H1g20504 | CX1g005902 | LOC_Os01g42710 | Os01g0612700 | LOL2, OsLOL2, OsLOL5 | Detail |
| C1H1g28272 | 1:21,848,607-21,849,535 | + | C2H1g10217 | CX1g003214 | LOC_Os01g42720 | Os01g0612800 | - | Detail |
| C1H1g20054 | 1:21,862,569-21,866,675 | + | C2H1g19518 | CX1g000139 | LOC_Os01g42730 | Os01g0612900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H11g21251 | 11:22,119,974-22,120,429 | - | - | - | - | - | - | Detail |
| C2H11g01232 | 11:22,124,937-22,126,647 | + | C1H11g21328 | CX11g013922 | LOC_Os11g41860 | Os11g0637300 | - | Detail |
| C2H11g18143 | 11:22,128,471-22,129,993 | - | C1H11g28520 | CX11g014541 | LOC_Os11g41870 | Os11g0637400 | OsPLT13 | Detail |
| C2H11g25023 | 11:22,132,085-22,133,700 | - | C1H11g11924 | CX11g012059 | LOC_Os11g41875 | Os11g0637501 | - | Detail |
| C2H11g06094 | 11:22,134,636-22,136,606 | - | C1H11g11834 | CX11g014677 | LOC_Os11g41880 | Os11g0637600 | - | Detail |
| C2H11g23632 | 11:22,146,539-22,151,026 | + | C1H11g18437 | CX11g013418 | LOC_Os11g41890 | Os11g0637700 | - | Detail |
| C2H11g11167 | 11:22,153,507-22,159,821 | - | C1H11g02220 | CX11g012671 | LOC_Os11g41900 | Os11g0637800 | OsLPAT2 | Detail |
| C2H11g12421 | 11:22,159,583-22,159,843 | + | - | CX11g013667 | - | Os11g0637900 | - | Detail |
| C2H11g19429 | 11:22,164,865-22,171,149 | + | C1H11g07864 | CX11g015032 | LOC_Os11g41910 | Os11g0638000 | - | Detail |
| C2H11g03357 | 11:22,173,214-22,175,626 | + | C1H11g09334 | CX11g010889 | LOC_Os11g41920 | Os11g0638200 | - | Detail |
| C2H11g20923 | 11:22,176,811-22,177,227 | + | C1H11g09676 | - | LOC_Os11g41920 | Os11g0638200 | - | Detail |
| C2H11g11753 | 11:22,178,524-22,178,943 | + | C1H11g09676 | - | LOC_Os11g41940 | Os11g0638200 | - | Detail |
| C2H11g21824 | 11:22,191,703-22,198,340 | - | C1H11g30292 | CX11g012224 | LOC_Os11g42030 | Os11g0638700 | - | Detail |
| C2H11g29546 | 11:22,200,138-22,206,985 | - | C1H11g06054 | CX11g012224 | LOC_Os11g41990 | Os11g0638900 | - | Detail |
| C2H11g03512 | 11:22,213,918-22,218,294 | + | C1H11g14461 | CX11g011607 | LOC_Os11g42000 | Os11g0639000 | - | Detail |
| C2H11g16299 | 11:22,219,274-22,222,420 | - | C1H11g01927 | CX11g014851 | LOC_Os11g42010 | Os11g0639100 | Pi54, Pi-kh, Pi-k<sup>h</sup> | Detail |
| C2H11g25522 | 11:22,222,942-22,229,831 | + | - | CX11g013493 | LOC_Os11g31220 | Os11g0534500 | - | Detail |
| C2H11g11704 | 11:22,236,842-22,242,408 | + | C1H11g18860 | CX11g012967 | - | - | - | Detail |
| C2H11g04023 | 11:22,254,808-22,258,893 | + | C1H11g03199 | CX11g013576 | LOC_Os11g42100 | Os11g0640800 | - | Detail |
| C2H11g22122 | 11:22,273,993-22,279,465 | + | C1H11g31489 | CX11g014890 | LOC_Os11g42160 | Os11g0641200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |