| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g25251 | 4:29,770,937-29,774,339 | + | C2H4g18780 | CX4g032489 | LOC_Os04g57210 | Os04g0667700 | - | Detail |
| C1H4g10442 | 4:29,775,601-29,777,954 | - | C2H4g23930 | CX4g035437 | LOC_Os04g57220 | Os04g0667800 | - | Detail |
| C1H4g01418 | 4:29,779,140-29,782,893 | + | C2H4g04165 | CX4g031421 | LOC_Os04g57230 | Os04g0667900 | - | Detail |
| C1H4g14062 | 4:29,791,967-29,793,229 | + | C2H4g12154 | CX4g035483 | LOC_Os04g57290 | Os04g0668600 | - | Detail |
| C1H4g07320 | 4:29,800,537-29,804,207 | + | C2H4g24314 | CX4g033794 | LOC_Os04g57310 | Os04g0668800 | - | Detail |
| C1H4g11017 | 4:29,804,295-29,807,449 | - | C2H4g10649 | CX4g035618 | LOC_Os04g57320 | Os04g0668900 | IM1, OsIM1, OsIM1a, OsIM2, OsIM, PTOX1 | Detail |
| C1H4g09478 | 4:29,808,705-29,811,139 | - | C2H4g23402 | CX4g035266 | LOC_Os04g57330 | Os04g0669100 | - | Detail |
| C1H4g00749 | 4:29,811,212-29,814,428 | - | - | - | - | - | - | Detail |
| C1H4g01273 | 4:29,814,498-29,815,073 | - | C2H4g26783 | CX4g032933 | LOC_Os04g57340 | Os04g0669200 | - | Detail |
| C1H4g10679 | 4:29,818,442-29,821,945 | + | C2H4g26457 | CX4g033726 | LOC_Os04g57350 | Os04g0669300 | - | Detail |
| C1H4g10307 | 4:29,828,271-29,830,881 | - | C2H4g05368 | CX4g034719 | LOC_Os04g57370 | Os04g0669500 | - | Detail |
| C1H4g20800 | 4:29,831,258-29,832,769 | - | C2H4g28278 | CX4g032862 | LOC_Os04g57380 | Os04g0669600 | - | Detail |
| C1H4g20558 | 4:29,833,528-29,837,062 | - | C2H4g09192 | CX4g032503 | LOC_Os04g57400 | Os04g0669800 | - | Detail |
| C1H4g00350 | 4:29,839,243-29,842,416 | - | C2H4g18679 | CX4g034572 | LOC_Os04g57410 | Os04g0669900 | - | Detail |
| C1H4g00962 | 4:29,846,976-29,848,929 | + | C2H4g24032 | CX4g034090 | LOC_Os04g57420 | Os04g0670000 | - | Detail |
| C1H4g27883 | 4:29,851,581-29,853,020 | + | C2H4g19769 | CX4g034422 | LOC_Os04g57430 | Os04g0670100 | - | Detail |
| C1H4g27420 | 4:29,853,298-29,856,748 | - | C2H4g02826 | CX4g033521 | LOC_Os04g57440 | Os04g0670200 | - | Detail |
| C1H4g13887 | 4:29,861,441-29,864,962 | - | C2H4g28360 | CX4g031684 | LOC_Os04g57480 | Os04g0670400 | - | Detail |
| C1H4g28653 | 4:29,865,528-29,867,244 | + | C2H4g01861 | CX4g032812 | LOC_Os04g57490 | Os04g0670500 | OsCP1 | Detail |
| C1H4g15123 | 4:29,868,947-29,870,610 | + | C2H4g11996 | CX4g032203 | LOC_Os04g57500 | Os04g0670700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g13579 | 4:28,763,409-28,763,813 | - | C1H4g26365 | CX4g032215 | LOC_Os04g56040 | Os04g0654400 | - | Detail |
| C2H4g22020 | 4:28,771,988-28,777,207 | + | C1H4g14701 | CX4g031454 | LOC_Os04g56060 | Os04g0654600 | - | Detail |
| C2H4g06510 | 4:28,782,158-28,785,020 | + | C1H4g02690 | - | LOC_Os04g56070 | Os04g0654700 | - | Detail |
| C2H4g17724 | 4:28,787,106-28,789,541 | - | C1H4g13931 | CX4g034657 | LOC_Os04g56080 | Os04g0654800 | SDRLK-55 | Detail |
| C2H4g14024 | 4:28,794,735-28,797,185 | + | C1H4g13931 | CX4g035423 | LOC_Os04g56090 | Os04g0655000 | SDRLK-33 | Detail |
| C2H4g14879 | 4:28,820,825-28,822,217 | + | C1H4g04876 | CX4g032288 | LOC_Os04g56110 | Os04g0655300 | OsRLCK168 | Detail |
| C2H4g02357 | 4:28,827,189-28,828,328 | - | C1H4g27782 | CX4g033115 | LOC_Os04g56120 | Os04g0655400 | - | Detail |
| C2H4g10579 | 4:28,845,205-28,846,380 | - | C1H4g27782 | CX4g033679 | LOC_Os04g56120 | Os04g0655400 | - | Detail |
| C2H4g22305 | 4:28,849,149-28,850,562 | + | C1H4g04876 | CX4g035541 | LOC_Os04g56130 | Os04g0655400 | - | Detail |
| C2H4g24407 | 4:28,851,195-28,858,642 | + | C1H4g18262 | CX4g031873 | LOC_Os04g56140 | Os04g0655600 | - | Detail |
| C2H4g23648 | 4:28,859,593-28,860,150 | - | C1H4g07256 | CX4g036135 | LOC_Os04g56150 | Os04g0655700 | - | Detail |
| C2H4g12431 | 4:28,886,384-28,891,792 | + | C1H4g27387 | CX4g033091 | LOC_Os04g56160 | Os04g0656100 | - | Detail |
| C2H4g21456 | 4:28,916,236-28,919,668 | + | C1H4g17338 | CX4g034325 | LOC_Os04g56170 | Os04g0656500 | OsLG1, OsSPL8 | Detail |
| C2H4g20311 | 4:28,926,194-28,930,069 | - | C1H4g19360 | CX4g033823 | LOC_Os04g56180 | Os04g0656800 | - | Detail |
| C2H4g17027 | 4:28,931,820-28,934,981 | - | C1H4g05427 | - | - | Os04g0657000 | - | Detail |
| C2H4g00900 | 4:28,936,620-28,939,253 | - | C1H4g18163 | CX4g034897 | LOC_Os04g56210 | Os04g0657100 | OsFPS5 | Detail |
| C2H4g05232 | 4:28,941,850-28,945,525 | - | C1H4g04914 | CX4g034884 | LOC_Os04g56230 | Os04g0657300 | OsFPS4 | Detail |
| C2H4g13688 | 4:28,947,198-28,949,863 | + | C1H4g03636 | CX4g032268 | LOC_Os04g56240 | Os04g0657500 | - | Detail |
| C2H4g19490 | 4:28,950,930-28,952,087 | - | - | CX4g035655 | LOC_Os04g56250 | Os04g0657600 | - | Detail |
| C2H4g02039 | 4:28,955,776-28,956,062 | + | C1H4g26663 | CX4g034791 | - | Os04g0657900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |