| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g25251 | 4:29,770,937-29,774,339 | + | C2H4g18780 | CX4g032489 | LOC_Os04g57210 | Os04g0667700 | - | Detail |
| C1H4g10442 | 4:29,775,601-29,777,954 | - | C2H4g23930 | CX4g035437 | LOC_Os04g57220 | Os04g0667800 | - | Detail |
| C1H4g01418 | 4:29,779,140-29,782,893 | + | C2H4g04165 | CX4g031421 | LOC_Os04g57230 | Os04g0667900 | - | Detail |
| C1H4g14062 | 4:29,791,967-29,793,229 | + | C2H4g12154 | CX4g035483 | LOC_Os04g57290 | Os04g0668600 | - | Detail |
| C1H4g07320 | 4:29,800,537-29,804,207 | + | C2H4g24314 | CX4g033794 | LOC_Os04g57310 | Os04g0668800 | - | Detail |
| C1H4g11017 | 4:29,804,295-29,807,449 | - | C2H4g10649 | CX4g035618 | LOC_Os04g57320 | Os04g0668900 | IM1, OsIM1, OsIM1a, OsIM2, OsIM, PTOX1 | Detail |
| C1H4g09478 | 4:29,808,705-29,811,139 | - | C2H4g23402 | CX4g035266 | LOC_Os04g57330 | Os04g0669100 | - | Detail |
| C1H4g00749 | 4:29,811,212-29,814,428 | - | - | - | - | - | - | Detail |
| C1H4g01273 | 4:29,814,498-29,815,073 | - | C2H4g26783 | CX4g032933 | LOC_Os04g57340 | Os04g0669200 | - | Detail |
| C1H4g10679 | 4:29,818,442-29,821,945 | + | C2H4g26457 | CX4g033726 | LOC_Os04g57350 | Os04g0669300 | - | Detail |
| C1H4g10307 | 4:29,828,271-29,830,881 | - | C2H4g05368 | CX4g034719 | LOC_Os04g57370 | Os04g0669500 | - | Detail |
| C1H4g20800 | 4:29,831,258-29,832,769 | - | C2H4g28278 | CX4g032862 | LOC_Os04g57380 | Os04g0669600 | - | Detail |
| C1H4g20558 | 4:29,833,528-29,837,062 | - | C2H4g09192 | CX4g032503 | LOC_Os04g57400 | Os04g0669800 | - | Detail |
| C1H4g00350 | 4:29,839,243-29,842,416 | - | C2H4g18679 | CX4g034572 | LOC_Os04g57410 | Os04g0669900 | - | Detail |
| C1H4g00962 | 4:29,846,976-29,848,929 | + | C2H4g24032 | CX4g034090 | LOC_Os04g57420 | Os04g0670000 | - | Detail |
| C1H4g27883 | 4:29,851,581-29,853,020 | + | C2H4g19769 | CX4g034422 | LOC_Os04g57430 | Os04g0670100 | - | Detail |
| C1H4g27420 | 4:29,853,298-29,856,748 | - | C2H4g02826 | CX4g033521 | LOC_Os04g57440 | Os04g0670200 | - | Detail |
| C1H4g13887 | 4:29,861,441-29,864,962 | - | C2H4g28360 | CX4g031684 | LOC_Os04g57480 | Os04g0670400 | - | Detail |
| C1H4g28653 | 4:29,865,528-29,867,244 | + | C2H4g01861 | CX4g032812 | LOC_Os04g57490 | Os04g0670500 | OsCP1 | Detail |
| C1H4g15123 | 4:29,868,947-29,870,610 | + | C2H4g11996 | CX4g032203 | LOC_Os04g57500 | Os04g0670700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H8g24817 | 8:21,749,344-21,752,196 | + | C1H8g05999 | CX8g054322 | LOC_Os08g40590 | Os08g0517700 | - | Detail |
| C2H8g04490 | 8:21,753,008-21,754,323 | - | C1H8g06788 | CX8g054570 | LOC_Os08g40600 | Os08g0517800 | - | Detail |
| C2H8g01143 | 8:21,755,569-21,757,023 | - | C1H8g13685 | CX8g051157 | LOC_Os08g40610 | Os08g0517900 | - | Detail |
| C2H8g15185 | 8:21,757,868-21,758,047 | - | C1H8g13685 | CX8g051157 | LOC_Os08g40610 | Os08g0517900 | - | Detail |
| C2H8g19438 | 8:21,766,335-21,770,976 | + | C1H8g08924 | CX8g050864 | LOC_Os08g40620 | Os08g0518100 | - | Detail |
| C2H8g02063 | 8:21,772,928-21,776,081 | - | C1H8g12041 | CX8g051822 | LOC_Os08g40630 | Os08g0518200 | - | Detail |
| C2H8g26493 | 8:21,781,569-21,782,462 | - | C1H8g22373 | CX8g054337 | LOC_Os08g40680 | Os08g0518800 | - | Detail |
| C2H8g07193 | 8:21,785,382-21,786,329 | + | C1H8g22373 | CX8g053488 | LOC_Os08g40690 | Os08g0518900 | - | Detail |
| C2H8g13729 | 8:21,787,857-21,789,444 | + | C1H8g31506 | CX8g051926 | LOC_Os08g40700 | Os08g0519000 | - | Detail |
| C2H8g27720 | 8:21,793,118-21,794,644 | - | C1H8g05297 | CX8g052752 | LOC_Os08g40720 | Os08g0519100 | - | Detail |
| C2H8g09995 | 8:21,800,790-21,802,404 | - | C1H8g11082 | CX8g054404 | - | Os08g0141000 | - | Detail |
| C2H8g05587 | 8:21,804,261-21,806,573 | - | C1H8g11082 | CX8g052517 | LOC_Os08g40640 | Os08g0518350 | - | Detail |
| C2H8g29826 | 8:21,816,168-21,821,118 | - | C1H8g31531 | CX8g051717 | LOC_Os08g40790 | Os08g0519400 | - | Detail |
| C2H8g08255 | 8:21,826,353-21,831,020 | + | C1H8g13205 | CX8g053497 | LOC_Os08g40820 | Os08g0519600 | - | Detail |
| C2H8g10028 | 8:21,839,219-21,842,460 | + | C1H8g15427 | CX8g054778 | LOC_Os08g40830 | Os08g0519700 | - | Detail |
| C2H8g12021 | 8:21,845,513-21,852,701 | + | C1H8g09208 | CX8g053862 | LOC_Os08g40830 | Os08g0519800 | - | Detail |
| C2H8g01663 | 8:21,853,419-21,855,983 | - | C1H8g02642 | CX8g053262 | LOC_Os08g40840 | Os08g0519900 | - | Detail |
| C2H8g08350 | 8:21,856,672-21,861,046 | - | C1H8g26214 | CX8g053282 | LOC_Os08g40850 | Os08g0520000 | - | Detail |
| C2H8g20150 | 8:21,861,618-21,864,661 | + | C1H8g00875 | CX8g050719 | LOC_Os08g40860 | Os08g0520100 | - | Detail |
| C2H8g12057 | 8:21,864,949-21,866,142 | - | C1H8g11327 | CX8g054665 | LOC_Os08g40870 | Os08g0520200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |