| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g08334 | 4:29,621,281-29,623,396 | + | C2H4g09681 | CX4g034395 | - | Os04g0665000 | - | Detail |
| C1H4g02808 | 4:29,624,269-29,626,285 | - | C2H4g19734 | CX4g035345 | LOC_Os04g56950 | Os04g0665200 | IAMT1, OsIAMT1, OsSABATH4 | Detail |
| C1H4g30864 | 4:29,634,268-29,636,873 | - | C2H4g02593 | CX4g036239 | LOC_Os04g56970 | Os04g0665400 | - | Detail |
| C1H4g09343 | 4:29,638,290-29,642,271 | + | C2H4g28957 | CX4g033681 | LOC_Os04g56980 | Os04g0665500 | - | Detail |
| C1H4g05828 | 4:29,642,939-29,645,216 | - | C2H4g00001 | CX4g031794 | LOC_Os04g56990 | Os04g0665600 | RLI1b | Detail |
| C1H4g09596 | 4:29,653,586-29,657,758 | + | C2H4g12242 | CX4g036304 | LOC_Os04g57010 | Os04g0665700 | - | Detail |
| C1H4g30725 | 4:29,658,336-29,661,190 | + | C2H4g11326 | CX4g034037 | LOC_Os04g57020 | Os04g0665800 | - | Detail |
| C1H4g22043 | 4:29,669,796-29,670,360 | + | C2H4g19860 | CX4g031479 | LOC_Os04g57050 | Os04g0665200 | IAMT1, OsIAMT1, OsSABATH4 | Detail |
| C1H4g22979 | 4:29,694,341-29,696,203 | + | C2H4g15180 | CX4g033040 | LOC_Os04g57050 | Os04g0665200 | IAMT1, OsIAMT1, OsSABATH4 | Detail |
| C1H4g03241 | 4:29,698,126-29,700,508 | + | C2H4g00735 | CX4g031479 | LOC_Os04g57050 | Os04g0665200 | IAMT1, OsIAMT1, OsSABATH4 | Detail |
| C1H4g01851 | 4:29,703,525-29,705,157 | + | C2H4g03747 | CX4g031479 | LOC_Os04g57080 | Os04g0665200 | IAMT1, OsIAMT1, OsSABATH4 | Detail |
| C1H4g29852 | 4:29,705,452-29,708,954 | + | C2H4g03474 | CX4g031652 | LOC_Os04g57090 | Os04g0665200 | IAMT1, OsIAMT1, OsSABATH4 | Detail |
| C1H4g05569 | 4:29,722,811-29,723,610 | - | C2H4g06767 | CX4g036468 | LOC_Os04g57130 | Os04g0666800 | - | Detail |
| C1H4g31368 | 4:29,724,299-29,734,405 | - | C2H4g00020 | CX4g031983 | LOC_Os04g57140 | Os04g0666900 | - | Detail |
| C1H4g04023 | 4:29,738,784-29,740,316 | + | C2H4g07739 | CX4g036271 | LOC_Os04g40190 | Os04g0478000 | - | Detail |
| C1H4g07804 | 4:29,740,577-29,744,407 | - | C2H4g30626 | CX4g034693 | LOC_Os04g57150 | Os04g0667000 | - | Detail |
| C1H4g29276 | 4:29,746,201-29,748,518 | + | C2H4g27314 | CX4g034777 | LOC_Os04g57160 | Os04g0667200 | - | Detail |
| C1H4g22147 | 4:29,753,795-29,755,286 | - | C2H4g03010 | CX4g031690 | LOC_Os04g57180 | Os04g0667400 | M2H, 2-ODD 21 | Detail |
| C1H4g19147 | 4:29,759,325-29,762,025 | - | C2H4g20638 | CX4g033675 | LOC_Os04g57190 | Os04g0667500 | - | Detail |
| C1H4g27331 | 4:29,767,650-29,768,947 | + | C2H4g26737 | CX4g035023 | LOC_Os04g57200 | Os04g0667600 | OsHIPP24 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g26314 | 1:6,202,428-6,205,007 | + | C1H1g06023 | CX1g004850 | LOC_Os01g12650 | Os01g0226300 | - | Detail |
| C2H1g13868 | 1:6,205,888-6,211,291 | - | C1H1g23194 | CX1g002355 | LOC_Os01g12660 | Os01g0226400 | - | Detail |
| C2H1g02547 | 1:6,214,425-6,220,207 | + | C1H1g24866 | CX1g000068 | LOC_Os01g12670 | Os01g0226500 | - | Detail |
| C2H1g29977 | 1:6,225,235-6,227,704 | + | C1H1g15047 | CX1g004471 | LOC_Os01g12680 | Os01g0226600 | - | Detail |
| C2H1g09030 | 1:6,254,290-6,255,477 | + | C1H1g31834 | CX1g004458 | LOC_Os01g12690 | Os01g0226700 | - | Detail |
| C2H1g01170 | 1:6,269,853-6,278,743 | + | C1H1g16770 | CX1g003495 | LOC_Os01g12710 | Os01g0227100 | - | Detail |
| C2H1g13949 | 1:6,288,929-6,293,725 | + | C1H1g17285 | CX1g000717 | LOC_Os01g12720 | Os01g0227200 | OsPERK1 | Detail |
| C2H1g18702 | 1:6,294,823-6,298,356 | + | C1H1g25457 | CX1g001842 | LOC_Os01g12730 | Os01g0227300 | - | Detail |
| C2H1g07843 | 1:6,299,097-6,301,091 | + | C1H1g25274 | CX1g005082 | LOC_Os01g12740 | Os01g0227400 | - | Detail |
| C2H1g27903 | 1:6,303,876-6,306,806 | + | C1H1g23728 | CX1g001031 | LOC_Os01g12750 | Os01g0227500 | - | Detail |
| C2H1g03495 | 1:6,319,132-6,320,597 | + | C1H1g24596 | CX1g001031 | LOC_Os01g12760 | Os01g0227700 | - | Detail |
| C2H1g07762 | 1:6,330,680-6,331,687 | + | C1H1g29841 | CX1g001031 | LOC_Os01g12770 | Os01g0227800 | - | Detail |
| C2H1g29591 | 1:6,332,142-6,332,423 | + | C1H1g01201 | CX1g005082 | LOC_Os01g12760 | Os01g0227700 | - | Detail |
| C2H1g07697 | 1:6,335,520-6,337,446 | + | C1H1g24596 | CX1g001031 | LOC_Os01g12760 | Os01g0227700 | - | Detail |
| C2H1g26121 | 1:6,340,173-6,341,153 | + | C1H1g05848 | CX1g001031 | LOC_Os01g12770 | Os01g0227800 | - | Detail |
| C2H1g22175 | 1:6,341,658-6,342,245 | + | C1H1g05848 | CX1g001031 | LOC_Os01g12770 | Os01g0227800 | - | Detail |
| C2H1g18144 | 1:6,348,787-6,352,298 | + | C1H1g29762 | CX1g005755 | LOC_Os01g12790 | Os01g0228200 | - | Detail |
| C2H1g23747 | 1:6,352,999-6,355,883 | - | C1H1g00126 | CX1g000008 | LOC_Os01g12800 | Os01g0228300 | - | Detail |
| C2H1g03627 | 1:6,359,984-6,362,107 | + | C1H1g09783 | CX1g001945 | LOC_Os01g12810 | Os01g0228400 | - | Detail |
| C2H1g17734 | 1:6,362,750-6,364,242 | - | C1H1g01893 | CX1g000835 | LOC_Os01g12820 | Os01g0228500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |