| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g08334 | 4:29,621,281-29,623,396 | + | C2H4g09681 | CX4g034395 | - | Os04g0665000 | - | Detail |
| C1H4g02808 | 4:29,624,269-29,626,285 | - | C2H4g19734 | CX4g035345 | LOC_Os04g56950 | Os04g0665200 | IAMT1, OsIAMT1, OsSABATH4 | Detail |
| C1H4g30864 | 4:29,634,268-29,636,873 | - | C2H4g02593 | CX4g036239 | LOC_Os04g56970 | Os04g0665400 | - | Detail |
| C1H4g09343 | 4:29,638,290-29,642,271 | + | C2H4g28957 | CX4g033681 | LOC_Os04g56980 | Os04g0665500 | - | Detail |
| C1H4g05828 | 4:29,642,939-29,645,216 | - | C2H4g00001 | CX4g031794 | LOC_Os04g56990 | Os04g0665600 | RLI1b | Detail |
| C1H4g09596 | 4:29,653,586-29,657,758 | + | C2H4g12242 | CX4g036304 | LOC_Os04g57010 | Os04g0665700 | - | Detail |
| C1H4g30725 | 4:29,658,336-29,661,190 | + | C2H4g11326 | CX4g034037 | LOC_Os04g57020 | Os04g0665800 | - | Detail |
| C1H4g22043 | 4:29,669,796-29,670,360 | + | C2H4g19860 | CX4g031479 | LOC_Os04g57050 | Os04g0665200 | IAMT1, OsIAMT1, OsSABATH4 | Detail |
| C1H4g22979 | 4:29,694,341-29,696,203 | + | C2H4g15180 | CX4g033040 | LOC_Os04g57050 | Os04g0665200 | IAMT1, OsIAMT1, OsSABATH4 | Detail |
| C1H4g03241 | 4:29,698,126-29,700,508 | + | C2H4g00735 | CX4g031479 | LOC_Os04g57050 | Os04g0665200 | IAMT1, OsIAMT1, OsSABATH4 | Detail |
| C1H4g01851 | 4:29,703,525-29,705,157 | + | C2H4g03747 | CX4g031479 | LOC_Os04g57080 | Os04g0665200 | IAMT1, OsIAMT1, OsSABATH4 | Detail |
| C1H4g29852 | 4:29,705,452-29,708,954 | + | C2H4g03474 | CX4g031652 | LOC_Os04g57090 | Os04g0665200 | IAMT1, OsIAMT1, OsSABATH4 | Detail |
| C1H4g05569 | 4:29,722,811-29,723,610 | - | C2H4g06767 | CX4g036468 | LOC_Os04g57130 | Os04g0666800 | - | Detail |
| C1H4g31368 | 4:29,724,299-29,734,405 | - | C2H4g00020 | CX4g031983 | LOC_Os04g57140 | Os04g0666900 | - | Detail |
| C1H4g04023 | 4:29,738,784-29,740,316 | + | C2H4g07739 | CX4g036271 | LOC_Os04g40190 | Os04g0478000 | - | Detail |
| C1H4g07804 | 4:29,740,577-29,744,407 | - | C2H4g30626 | CX4g034693 | LOC_Os04g57150 | Os04g0667000 | - | Detail |
| C1H4g29276 | 4:29,746,201-29,748,518 | + | C2H4g27314 | CX4g034777 | LOC_Os04g57160 | Os04g0667200 | - | Detail |
| C1H4g22147 | 4:29,753,795-29,755,286 | - | C2H4g03010 | CX4g031690 | LOC_Os04g57180 | Os04g0667400 | M2H, 2-ODD 21 | Detail |
| C1H4g19147 | 4:29,759,325-29,762,025 | - | C2H4g20638 | CX4g033675 | LOC_Os04g57190 | Os04g0667500 | - | Detail |
| C1H4g27331 | 4:29,767,650-29,768,947 | + | C2H4g26737 | CX4g035023 | LOC_Os04g57200 | Os04g0667600 | OsHIPP24 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H12g30398 | 12:464,431-466,073 | - | C1H11g05819 | CX12g017999 | LOC_Os12g01900 | Os11g0109700 | - | Detail |
| C2H12g14314 | 12:466,277-467,170 | - | C1H11g05819 | CX12g017999 | LOC_Os12g01900 | Os12g0109700 | - | Detail |
| C2H12g14425 | 12:469,972-473,953 | + | C1H12g11854 | CX12g015337 | LOC_Os12g01910 | Os12g0109800 | - | Detail |
| C2H12g26139 | 12:475,194-476,642 | - | C1H11g26109 | CX12g015162 | LOC_Os12g01916 | Os12g0109900 | - | Detail |
| C2H12g04773 | 12:476,759-479,129 | - | C1H11g26109 | CX12g015162 | LOC_Os12g01916 | Os12g0109900 | - | Detail |
| C2H12g10658 | 12:480,105-489,851 | - | C1H12g24224 | CX12g015162 | LOC_Os12g01922 | Os12g0110000 | - | Detail |
| C2H12g12112 | 12:494,610-497,730 | - | C1H12g13590 | CX12g017518 | LOC_Os12g01930 | Os12g0110100 | - | Detail |
| C2H12g17021 | 12:498,276-501,483 | - | C1H12g23491 | CX12g015078 | LOC_Os12g01940 | Os12g0110300 | - | Detail |
| C2H12g05654 | 12:501,669-504,116 | + | C1H12g03381 | CX12g016362 | LOC_Os12g01950 | Os12g0110400 | - | Detail |
| C2H12g21050 | 12:520,766-523,470 | + | C1H12g03151 | CX12g015887 | LOC_Os12g02020 | Os12g0111400 | - | Detail |
| C2H12g18672 | 12:523,798-525,367 | - | C1H11g25556 | CX12g016454 | LOC_Os12g02030 | Os12g0111500 | - | Detail |
| C2H12g15668 | 12:530,556-530,966 | - | C1H12g08905 | CX12g018566 | LOC_Os12g02040 | Os12g0111600 | - | Detail |
| C2H12g30261 | 12:533,089-534,966 | + | C1H12g25705 | CX12g016102 | LOC_Os11g02090 | Os12g0111700 | - | Detail |
| C2H12g20566 | 12:537,330-538,857 | + | C1H11g29054 | CX12g016369 | LOC_Os12g02060 | Os12g0111800 | - | Detail |
| C2H12g14717 | 12:539,787-540,555 | - | C1H12g03557 | CX12g016960 | LOC_Os12g02070 | Os12g0416500 | - | Detail |
| C2H12g11323 | 12:547,295-549,507 | + | C1H12g09789 | CX12g017779 | LOC_Os12g02080 | Os12g0112000 | - | Detail |
| C2H12g07351 | 12:550,393-552,985 | + | C1H12g21197 | CX12g016421 | LOC_Os12g02094 | Os12g0112200 | - | Detail |
| C2H12g02181 | 12:554,403-559,835 | + | C1H12g08143 | CX12g016020 | LOC_Os12g02100 | Os12g0112300 | - | Detail |
| C2H12g27918 | 12:560,294-564,540 | + | C1H12g16160 | CX12g017415 | LOC_Os12g02105 | Os12g0112401 | - | Detail |
| C2H12g12409 | 12:562,202-565,120 | - | C1H12g21687 | CX12g018065 | LOC_Os12g02120 | Os12g0112500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |