| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g02251 | 4:29,440,701-29,440,994 | + | C2H4g07923 | CX4g035528 | LOC_Os04g56610 | - | - | Detail |
| C1H4g07215 | 4:29,444,839-29,449,014 | + | C2H4g09519 | CX4g032531 | LOC_Os04g56620 | Os04g0661600 | OsCNX1 | Detail |
| C1H4g05764 | 4:29,449,074-29,456,814 | - | C2H4g30358 | CX4g035527 | LOC_Os04g56630 | Os04g0661700 | - | Detail |
| C1H4g15510 | 4:29,458,517-29,459,700 | - | C2H4g15418 | CX4g036335 | LOC_Os04g56640 | Os04g0661800 | - | Detail |
| C1H4g17837 | 4:29,461,361-29,465,005 | + | C2H4g25643 | CX4g035742 | LOC_Os04g56646 | Os04g0661900 | - | Detail |
| C1H4g07157 | 4:29,465,879-29,467,585 | + | C2H4g06604 | CX4g035185 | LOC_Os04g56654 | - | - | Detail |
| C1H4g06952 | 4:29,468,052-29,469,832 | - | C2H4g27865 | CX4g035521 | LOC_Os04g56670 | Os04g0662100 | - | Detail |
| C1H4g20842 | 4:29,492,711-29,495,836 | - | C2H4g27508 | CX4g032460 | LOC_Os04g56700 | Os04g0662600 | F3H | Detail |
| C1H4g09059 | 4:29,497,177-29,501,717 | - | C2H4g17303 | CX4g034138 | LOC_Os04g56710 | Os04g0662700 | - | Detail |
| C1H4g13098 | 4:29,503,747-29,509,876 | + | C2H4g16716 | CX4g034339 | LOC_Os04g56720 | Os04g0662800 | - | Detail |
| C1H4g29894 | 4:29,510,592-29,512,553 | - | C2H4g14267 | CX4g033445 | LOC_Os04g56730 | Os04g0662900 | - | Detail |
| C1H4g08308 | 4:29,529,386-29,535,319 | + | C2H4g26679 | CX4g032535 | LOC_Os04g56740 | Os04g0663100 | - | Detail |
| C1H4g00285 | 4:29,538,771-29,544,273 | - | C2H4g19453 | CX4g033028 | LOC_Os04g56750 | Os04g0663200 | - | Detail |
| C1H4g10605 | 4:29,546,843-29,547,097 | + | C2H4g23478 | CX4g034501 | - | - | - | Detail |
| C1H4g18316 | 4:29,547,148-29,550,525 | + | C2H4g29870 | CX4g032009 | LOC_Os04g56770 | Os04g0663500 | - | Detail |
| C1H4g08413 | 4:29,551,368-29,552,386 | - | C2H4g27682 | CX4g035961 | LOC_Os04g56780 | Os04g0663600 | WOX1, Os WUS, WUS, OsWOX1, OsWUS, TAB1, TAB1/WUS, MOC3, MOC3/OsWUS | Detail |
| C1H4g06808 | 4:29,560,529-29,567,508 | - | C2H4g25028 | CX4g034853 | LOC_Os04g56790 | Os04g0663700 | - | Detail |
| C1H4g18422 | 4:29,575,958-29,581,942 | - | C2H4g20102 | CX4g033249 | LOC_Os04g56850 | Os04g0664400 | OsARF11, OsMP | Detail |
| C1H4g28826 | 4:29,615,096-29,617,428 | - | C2H4g12473 | CX4g036377 | LOC_Os04g56920 | Os04g0664800 | - | Detail |
| C1H4g05011 | 4:29,618,216-29,620,579 | - | C2H4g26922 | CX4g036377 | LOC_Os04g56930 | Os04g0664900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g28698 | 9:1,487,240-1,496,362 | - | C1H9g29952 | CX9g056246 | LOC_Os09g03630 | Os09g0123500 | - | Detail |
| C2H9g19292 | 9:1,536,311-1,545,865 | - | C1H9g16072 | CX9g057791 | LOC_Os09g03680 | Os09g0124100 | - | Detail |
| C2H9g25534 | 9:1,560,865-1,562,022 | - | C1H9g23209 | - | - | - | - | Detail |
| C2H9g24306 | 9:1,565,222-1,568,002 | - | C1H9g23209 | - | - | - | - | Detail |
| C2H9g16378 | 9:1,569,834-1,579,280 | + | C1H9g12801 | CX9g056574 | LOC_Os09g03750 | Os09g0124800 | - | Detail |
| C2H9g09163 | 9:1,591,367-1,592,010 | - | C1H9g18385 | CX9g057875 | LOC_Os09g03780 | Os02g0135850 | - | Detail |
| C2H9g12670 | 9:1,606,662-1,607,297 | - | C1H9g04346 | CX9g057169 | LOC_Os09g03810 | Os09g0125400 | - | Detail |
| C2H9g17647 | 9:1,637,192-1,640,689 | + | C1H9g26448 | CX9g055235 | LOC_Os09g03890 | Os09g0125828 | TAPE | Detail |
| C2H9g28868 | 9:1,662,498-1,675,693 | - | C1H9g19601 | CX9g056929 | LOC_Os09g03939 | Os09g0125900 | - | Detail |
| C2H9g26990 | 9:1,716,065-1,716,805 | + | C1H9g10816 | CX9g056311 | LOC_Os09g03990 | Os09g0126600 | - | Detail |
| C2H9g15050 | 9:1,735,263-1,735,961 | + | C1H5g18816 | CX9g056105 | - | Os10g0408700 | - | Detail |
| C2H9g29380 | 9:1,736,488-1,737,407 | + | C1H9g06259 | CX9g055011 | - | - | - | Detail |
| C2H9g25301 | 9:1,740,826-1,742,474 | + | C1H9g22700 | - | - | - | - | Detail |
| C2H9g25521 | 9:1,746,832-1,750,373 | - | C1H9g15887 | CX9g054979 | LOC_Os09g04050 | Os09g0127300 | OsCCR17 | Detail |
| C2H9g06710 | 9:1,775,688-1,776,053 | - | - | CX9g057890 | LOC_Os09g04100 | Os09g0127700 | - | Detail |
| C2H9g09431 | 9:1,789,603-1,795,661 | - | C1H9g16571 | CX9g056004 | LOC_Os09g04110 | Os09g0127800 | - | Detail |
| C2H9g00209 | 9:1,823,495-1,829,332 | - | C1H9g16037 | CX9g057437 | LOC_Os09g04160 | Os09g0128400 | - | Detail |
| C2H9g03904 | 9:1,840,304-1,848,461 | - | C1H9g24985 | CX9g055087 | LOC_Os09g04210 | Os09g0128600 | - | Detail |
| C2H9g28638 | 9:1,856,095-1,857,048 | + | C1H9g09088 | CX9g056204 | LOC_Os09g04310 | Os09g0129500 | - | Detail |
| C2H9g26215 | 9:1,879,816-1,880,763 | - | C1H9g09088 | CX9g055776 | LOC_Os09g04339 | Os09g0129600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |