| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g22426 | 4:29,280,449-29,284,611 | - | C2H4g07943 | CX4g035564 | LOC_Os04g56320 | Os04g0658300 | - | Detail |
| C1H4g02567 | 4:29,285,564-29,287,483 | + | C2H4g15217 | CX4g034664 | LOC_Os04g56330 | Os04g0658400 | - | Detail |
| C1H4g28073 | 4:29,289,212-29,290,711 | + | - | - | - | - | - | Detail |
| C1H4g14487 | 4:29,292,438-29,294,195 | + | C2H4g01057 | CX4g032825 | LOC_Os04g56360 | Os04g0658700 | - | Detail |
| C1H4g05647 | 4:29,309,896-29,310,481 | + | C2H4g03523 | CX4g035898 | LOC_Os04g56390 | Os04g0659000 | - | Detail |
| C1H4g10806 | 4:29,311,057-29,314,991 | - | C2H4g04887 | CX4g036192 | LOC_Os04g56400 | Os04g0659100 | - | Detail |
| C1H4g14313 | 4:29,315,932-29,318,966 | - | C2H4g04584 | CX4g033838 | LOC_Os04g56405 | Os04g0659150 | - | Detail |
| C1H4g16762 | 4:29,318,801-29,321,597 | + | - | - | - | - | - | Detail |
| C1H4g07874 | 4:29,332,150-29,336,420 | + | C2H4g27064 | CX4g035777 | LOC_Os04g56440 | Os04g0659400 | - | Detail |
| C1H4g27386 | 4:29,336,788-29,340,898 | - | C2H4g24328 | CX4g036481 | LOC_Os04g56450 | Os04g0659500 | - | Detail |
| C1H4g14580 | 4:29,343,264-29,344,325 | + | C2H4g10685 | - | LOC_Os04g56460 | Os04g0625600 | - | Detail |
| C1H4g18216 | 4:29,347,249-29,349,605 | + | C2H4g12106 | CX4g034160 | LOC_Os04g56470 | Os04g0659800 | OsAAP14 | Detail |
| C1H4g27663 | 4:29,350,119-29,357,662 | + | C2H4g12958 | CX4g035966 | LOC_Os04g56480 | Os04g0659900 | LML1, OsPELOTA, splHM47, spl<sup>HM47</sup> | Detail |
| C1H4g08060 | 4:29,387,304-29,393,142 | - | C2H4g24952 | CX4g036525 | LOC_Os04g56510 | Os04g0660200 | - | Detail |
| C1H4g00868 | 4:29,394,939-29,397,084 | + | C2H4g30016 | CX4g036101 | LOC_Os04g56520 | Os04g0660400 | - | Detail |
| C1H4g10729 | 4:29,397,514-29,409,092 | - | C2H4g26135 | CX4g035137 | LOC_Os04g56530 | Os04g0660500 | OsMAPKKKε | Detail |
| C1H4g10414 | 4:29,410,932-29,413,204 | - | C2H4g29217 | - | LOC_Os04g56540 | Os04g0660600 | - | Detail |
| C1H4g30756 | 4:29,418,480-29,421,170 | + | C2H4g17344 | CX4g033242 | LOC_Os04g56560 | Os04g0660900 | - | Detail |
| C1H4g23437 | 4:29,422,380-29,423,153 | - | C2H4g20585 | CX4g035810 | LOC_Os04g56570 | Os04g0661100 | - | Detail |
| C1H4g26877 | 4:29,423,924-29,435,866 | - | C2H4g16922 | CX4g032179 | LOC_Os04g56590 | Os04g0661200 | OsIPK1 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g30152 | 5:4,837,914-4,841,793 | - | C1H5g16271 | CX5g038556 | LOC_Os05g10840 | Os05g0197300 | OsIQM4 | Detail |
| C2H5g12432 | 5:4,909,848-4,912,376 | + | C1H5g10297 | CX5g037420 | LOC_Os05g10940 | Os05g0198400 | OsZIP7, OsZIP7a | Detail |
| C2H5g04726 | 5:4,986,837-4,991,684 | - | C1H5g27847 | CX5g040714 | LOC_Os05g11060 | Os05g0199500 | - | Detail |
| C2H5g14163 | 5:4,996,414-4,996,756 | + | C1H5g20713 | - | LOC_Os05g11070 | Os05g0199800 | - | Detail |
| C2H5g29235 | 5:4,996,858-4,998,460 | + | C1H5g20713 | CX5g040241 | LOC_Os05g11070 | Os05g0199800 | - | Detail |
| C2H5g19241 | 5:5,018,471-5,022,116 | - | C1H5g24494 | CX5g038242 | LOC_Os05g11090 | Os05g0200100 | - | Detail |
| C2H5g12785 | 5:5,048,231-5,053,726 | + | C1H5g13482 | CX5g039760 | LOC_Os05g11130 | Os05g0200400 | CYP90D5 | Detail |
| C2H5g15084 | 5:5,053,946-5,063,206 | - | C1H5g01493 | CX5g040326 | LOC_Os05g11140 | Os05g0200500 | - | Detail |
| C2H5g25833 | 5:5,114,949-5,116,137 | - | C1H5g09950 | CX5g037741 | - | - | - | Detail |
| C2H5g11472 | 5:5,118,565-5,119,755 | + | C1H5g26903 | - | LOC_Os01g02490 | Os01g0115100 | - | Detail |
| C2H5g03949 | 5:5,180,531-5,181,738 | + | C1H5g18473 | - | LOC_Os05g11320 | Os05g0202800 | - | Detail |
| C2H5g10422 | 5:5,251,291-5,253,735 | - | C1H5g07479 | - | LOC_Os05g11414 | Os05g0203800 | MADS58, OsMADS58 | Detail |
| C2H5g08779 | 5:5,261,872-5,262,681 | - | C1H5g28755 | CX5g037692 | LOC_Os05g11414 | Os05g0203800 | MADS58, OsMADS58 | Detail |
| C2H5g20110 | 5:5,274,535-5,280,965 | - | C1H5g03480 | CX5g038459 | LOC_Os05g11428 | Os05g0203900 | - | Detail |
| C2H5g21838 | 5:5,282,922-5,283,398 | - | C1H5g20093 | CX5g039849 | - | - | - | Detail |
| C2H5g22266 | 5:5,297,466-5,297,837 | - | C1H5g10517 | CX5g040509 | - | Os05g0204163 | - | Detail |
| C2H5g27150 | 5:5,315,869-5,318,423 | + | C1H5g13043 | CX5g039095 | LOC_Os05g11510 | Os05g0204600 | OsBBX14, OsDBB3b | Detail |
| C2H5g26826 | 5:5,321,295-5,329,037 | + | C1H5g18115 | CX5g038135 | LOC_Os05g11550 | Os05g0204900 | - | Detail |
| C2H5g00147 | 5:5,329,837-5,334,706 | - | C1H5g26208 | CX5g037237 | LOC_Os05g11560 | Os05g0205050 | - | Detail |
| C2H5g19039 | 5:5,409,738-5,411,477 | + | C1H5g00364 | - | LOC_Os05g11630 | Os05g0206200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |