| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g22426 | 4:29,280,449-29,284,611 | - | C2H4g07943 | CX4g035564 | LOC_Os04g56320 | Os04g0658300 | - | Detail |
| C1H4g02567 | 4:29,285,564-29,287,483 | + | C2H4g15217 | CX4g034664 | LOC_Os04g56330 | Os04g0658400 | - | Detail |
| C1H4g28073 | 4:29,289,212-29,290,711 | + | - | - | - | - | - | Detail |
| C1H4g14487 | 4:29,292,438-29,294,195 | + | C2H4g01057 | CX4g032825 | LOC_Os04g56360 | Os04g0658700 | - | Detail |
| C1H4g05647 | 4:29,309,896-29,310,481 | + | C2H4g03523 | CX4g035898 | LOC_Os04g56390 | Os04g0659000 | - | Detail |
| C1H4g10806 | 4:29,311,057-29,314,991 | - | C2H4g04887 | CX4g036192 | LOC_Os04g56400 | Os04g0659100 | - | Detail |
| C1H4g14313 | 4:29,315,932-29,318,966 | - | C2H4g04584 | CX4g033838 | LOC_Os04g56405 | Os04g0659150 | - | Detail |
| C1H4g16762 | 4:29,318,801-29,321,597 | + | - | - | - | - | - | Detail |
| C1H4g07874 | 4:29,332,150-29,336,420 | + | C2H4g27064 | CX4g035777 | LOC_Os04g56440 | Os04g0659400 | - | Detail |
| C1H4g27386 | 4:29,336,788-29,340,898 | - | C2H4g24328 | CX4g036481 | LOC_Os04g56450 | Os04g0659500 | - | Detail |
| C1H4g14580 | 4:29,343,264-29,344,325 | + | C2H4g10685 | - | LOC_Os04g56460 | Os04g0625600 | - | Detail |
| C1H4g18216 | 4:29,347,249-29,349,605 | + | C2H4g12106 | CX4g034160 | LOC_Os04g56470 | Os04g0659800 | OsAAP14 | Detail |
| C1H4g27663 | 4:29,350,119-29,357,662 | + | C2H4g12958 | CX4g035966 | LOC_Os04g56480 | Os04g0659900 | LML1, OsPELOTA, splHM47, spl<sup>HM47</sup> | Detail |
| C1H4g08060 | 4:29,387,304-29,393,142 | - | C2H4g24952 | CX4g036525 | LOC_Os04g56510 | Os04g0660200 | - | Detail |
| C1H4g00868 | 4:29,394,939-29,397,084 | + | C2H4g30016 | CX4g036101 | LOC_Os04g56520 | Os04g0660400 | - | Detail |
| C1H4g10729 | 4:29,397,514-29,409,092 | - | C2H4g26135 | CX4g035137 | LOC_Os04g56530 | Os04g0660500 | OsMAPKKKε | Detail |
| C1H4g10414 | 4:29,410,932-29,413,204 | - | C2H4g29217 | - | LOC_Os04g56540 | Os04g0660600 | - | Detail |
| C1H4g30756 | 4:29,418,480-29,421,170 | + | C2H4g17344 | CX4g033242 | LOC_Os04g56560 | Os04g0660900 | - | Detail |
| C1H4g23437 | 4:29,422,380-29,423,153 | - | C2H4g20585 | CX4g035810 | LOC_Os04g56570 | Os04g0661100 | - | Detail |
| C1H4g26877 | 4:29,423,924-29,435,866 | - | C2H4g16922 | CX4g032179 | LOC_Os04g56590 | Os04g0661200 | OsIPK1 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H10g01759 | 10:1,901,590-1,904,779 | + | C1H10g06009 | CX10g007336 | LOC_Os10g04570 | Os10g0134800 | - | Detail |
| C2H10g30184 | 10:1,906,700-1,908,145 | + | C1H10g06009 | CX10g009385 | LOC_Os10g04560 | Os10g0134900 | - | Detail |
| C2H10g17625 | 10:1,921,870-1,923,312 | + | C1H10g30186 | CX10g009385 | LOC_Os10g04570 | Os10g0135100 | - | Detail |
| C2H10g26651 | 10:1,926,398-1,930,677 | - | C1H10g15685 | CX10g010113 | LOC_Os10g04580 | Os10g0135200 | - | Detail |
| C2H10g01036 | 10:1,938,744-1,941,909 | + | C1H10g14969 | CX10g010732 | LOC_Os10g04590 | Os10g0135300 | - | Detail |
| C2H10g21404 | 10:1,945,641-1,946,801 | + | C1H10g16986 | CX10g010793 | LOC_Os10g04600 | Os10g0135400 | - | Detail |
| C2H10g12474 | 10:1,950,087-1,959,752 | + | C1H10g10511 | CX10g008928 | LOC_Os10g04620 | Os10g0135600 | - | Detail |
| C2H10g09657 | 10:1,967,446-1,968,621 | - | C1H10g14969 | CX10g010732 | LOC_Os10g04590 | Os10g0135300 | - | Detail |
| C2H10g20424 | 10:1,976,551-1,979,337 | - | C1H10g02894 | CX10g007273 | LOC_Os10g04674 | Os10g0136100 | - | Detail |
| C2H10g24326 | 10:1,985,793-1,987,755 | - | C1H10g02169 | CX10g010219 | LOC_Os10g04690 | Os10g0136200 | - | Detail |
| C2H10g14693 | 10:1,990,818-1,993,760 | - | C1H10g21018 | CX10g009432 | LOC_Os10g04720 | Os10g0136400 | Gnk2RLK-7 | Detail |
| C2H10g01508 | 10:1,999,601-2,004,069 | + | C1H10g14318 | CX10g010109 | LOC_Os10g04730 | Os10g0136500 | Gnk2RLK-8 | Detail |
| C2H10g24804 | 10:2,013,914-2,015,047 | - | C1H10g01305 | CX10g010219 | LOC_Os10g04780 | Os10g0137000 | - | Detail |
| C2H10g19702 | 10:2,015,275-2,015,529 | - | C1H5g08074 | CX6g045323 | - | - | - | Detail |
| C2H10g00951 | 10:2,015,752-2,015,958 | - | C1H5g30185 | CX6g045323 | - | - | - | Detail |
| C2H10g30460 | 10:2,028,713-2,029,598 | + | C1H10g27322 | - | - | Os10g0137100 | - | Detail |
| C2H10g12446 | 10:2,032,923-2,033,214 | + | C1H10g10825 | CX10g007398 | LOC_Os10g04800 | Os10g0137300 | - | Detail |
| C2H10g00873 | 10:2,052,454-2,055,257 | - | C1H10g07838 | CX10g010455 | LOC_Os10g05000 | Os10g0137700 | - | Detail |
| C2H10g13734 | 10:2,062,878-2,063,435 | - | C1H11g24372 | CX11g014312 | LOC_Os12g03380 | - | - | Detail |
| C2H10g18542 | 10:2,064,893-2,067,997 | - | C1H10g10208 | CX10g008964 | LOC_Os10g04850 | Os10g0138000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |