| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g22426 | 4:29,280,449-29,284,611 | - | C2H4g07943 | CX4g035564 | LOC_Os04g56320 | Os04g0658300 | - | Detail |
| C1H4g02567 | 4:29,285,564-29,287,483 | + | C2H4g15217 | CX4g034664 | LOC_Os04g56330 | Os04g0658400 | - | Detail |
| C1H4g28073 | 4:29,289,212-29,290,711 | + | - | - | - | - | - | Detail |
| C1H4g14487 | 4:29,292,438-29,294,195 | + | C2H4g01057 | CX4g032825 | LOC_Os04g56360 | Os04g0658700 | - | Detail |
| C1H4g05647 | 4:29,309,896-29,310,481 | + | C2H4g03523 | CX4g035898 | LOC_Os04g56390 | Os04g0659000 | - | Detail |
| C1H4g10806 | 4:29,311,057-29,314,991 | - | C2H4g04887 | CX4g036192 | LOC_Os04g56400 | Os04g0659100 | - | Detail |
| C1H4g14313 | 4:29,315,932-29,318,966 | - | C2H4g04584 | CX4g033838 | LOC_Os04g56405 | Os04g0659150 | - | Detail |
| C1H4g16762 | 4:29,318,801-29,321,597 | + | - | - | - | - | - | Detail |
| C1H4g07874 | 4:29,332,150-29,336,420 | + | C2H4g27064 | CX4g035777 | LOC_Os04g56440 | Os04g0659400 | - | Detail |
| C1H4g27386 | 4:29,336,788-29,340,898 | - | C2H4g24328 | CX4g036481 | LOC_Os04g56450 | Os04g0659500 | - | Detail |
| C1H4g14580 | 4:29,343,264-29,344,325 | + | C2H4g10685 | - | LOC_Os04g56460 | Os04g0625600 | - | Detail |
| C1H4g18216 | 4:29,347,249-29,349,605 | + | C2H4g12106 | CX4g034160 | LOC_Os04g56470 | Os04g0659800 | OsAAP14 | Detail |
| C1H4g27663 | 4:29,350,119-29,357,662 | + | C2H4g12958 | CX4g035966 | LOC_Os04g56480 | Os04g0659900 | LML1, OsPELOTA, splHM47, spl<sup>HM47</sup> | Detail |
| C1H4g08060 | 4:29,387,304-29,393,142 | - | C2H4g24952 | CX4g036525 | LOC_Os04g56510 | Os04g0660200 | - | Detail |
| C1H4g00868 | 4:29,394,939-29,397,084 | + | C2H4g30016 | CX4g036101 | LOC_Os04g56520 | Os04g0660400 | - | Detail |
| C1H4g10729 | 4:29,397,514-29,409,092 | - | C2H4g26135 | CX4g035137 | LOC_Os04g56530 | Os04g0660500 | OsMAPKKKε | Detail |
| C1H4g10414 | 4:29,410,932-29,413,204 | - | C2H4g29217 | - | LOC_Os04g56540 | Os04g0660600 | - | Detail |
| C1H4g30756 | 4:29,418,480-29,421,170 | + | C2H4g17344 | CX4g033242 | LOC_Os04g56560 | Os04g0660900 | - | Detail |
| C1H4g23437 | 4:29,422,380-29,423,153 | - | C2H4g20585 | CX4g035810 | LOC_Os04g56570 | Os04g0661100 | - | Detail |
| C1H4g26877 | 4:29,423,924-29,435,866 | - | C2H4g16922 | CX4g032179 | LOC_Os04g56590 | Os04g0661200 | OsIPK1 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g20058 | 1:26,321,646-26,325,487 | + | C1H1g20698 | CX1g004912 | LOC_Os01g51390 | Os01g0711100 | - | Detail |
| C2H1g29914 | 1:26,328,761-26,330,816 | + | C1H1g14378 | CX1g006000 | LOC_Os01g51400 | Os01g0711200 | - | Detail |
| C2H1g17094 | 1:26,336,681-26,343,638 | + | C1H1g06125 | CX1g004328 | LOC_Os01g51410 | Os01g0711400 | - | Detail |
| C2H1g13046 | 1:26,345,176-26,348,649 | + | C1H1g22520 | CX1g005290 | LOC_Os01g51420 | Os01g0711500 | OsCBL10 | Detail |
| C2H1g24377 | 1:26,349,225-26,352,009 | + | C1H1g02976 | - | - | - | - | Detail |
| C2H1g30017 | 1:26,357,182-26,359,656 | - | C1H1g07891 | CX1g001138 | LOC_Os01g51450 | Os01g0711800 | - | Detail |
| C2H1g29049 | 1:26,363,078-26,364,819 | - | C1H1g26536 | CX1g003877 | LOC_Os01g51470 | Os01g0712500 | - | Detail |
| C2H1g17668 | 1:26,375,982-26,380,021 | - | C1H1g14497 | CX1g005977 | LOC_Os01g51520 | Os01g0712500 | - | Detail |
| C2H1g18972 | 1:26,380,879-26,384,613 | - | C1H1g30738 | - | - | - | - | Detail |
| C2H1g29576 | 1:26,392,367-26,393,014 | - | C1H1g28237 | CX1g003877 | LOC_Os01g51490 | Os01g0711900 | - | Detail |
| C2H1g21215 | 1:26,412,836-26,415,165 | - | C1H1g09610 | CX1g005977 | LOC_Os01g51530 | Os01g0712600 | - | Detail |
| C2H1g16428 | 1:26,427,054-26,428,339 | + | C1H1g29773 | CX1g004438 | LOC_Os01g51550 | Os01g0712800 | - | Detail |
| C2H1g17193 | 1:26,434,325-26,435,710 | + | C1H1g05015 | CX1g004707 | LOC_Os01g51570 | Os01g0713200 | - | Detail |
| C2H1g10923 | 1:26,438,845-26,443,816 | + | C1H1g16737 | CX1g006175 | LOC_Os01g51610 | Os01g0713600 | OsLFL1 | Detail |
| C2H1g14637 | 1:26,447,051-26,450,221 | + | C1H1g22175 | CX1g006183 | LOC_Os01g51620 | Os01g0713800 | - | Detail |
| C2H1g19385 | 1:26,453,698-26,475,235 | - | C1H1g05405 | CX1g003130 | LOC_Os01g51632 | Os01g0713900 | - | Detail |
| C2H1g30054 | 1:26,479,803-26,483,694 | - | C1H1g08011 | CX1g004684 | LOC_Os01g51640 | Os01g0714100 | - | Detail |
| C2H1g26622 | 1:26,497,076-26,498,498 | - | C1H1g17120 | CX1g003615 | LOC_Os01g51690 | Os01g0714800 | OsWRKY26 | Detail |
| C2H1g20321 | 1:26,504,204-26,510,223 | - | C1H1g10774 | CX1g003805 | LOC_Os01g51700 | Os01g0714900 | - | Detail |
| C2H1g05791 | 1:26,511,927-26,515,021 | - | C1H1g01771 | CX1g000690 | LOC_Os01g51710 | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |