| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g22426 | 4:29,280,449-29,284,611 | - | C2H4g07943 | CX4g035564 | LOC_Os04g56320 | Os04g0658300 | - | Detail |
| C1H4g02567 | 4:29,285,564-29,287,483 | + | C2H4g15217 | CX4g034664 | LOC_Os04g56330 | Os04g0658400 | - | Detail |
| C1H4g28073 | 4:29,289,212-29,290,711 | + | - | - | - | - | - | Detail |
| C1H4g14487 | 4:29,292,438-29,294,195 | + | C2H4g01057 | CX4g032825 | LOC_Os04g56360 | Os04g0658700 | - | Detail |
| C1H4g05647 | 4:29,309,896-29,310,481 | + | C2H4g03523 | CX4g035898 | LOC_Os04g56390 | Os04g0659000 | - | Detail |
| C1H4g10806 | 4:29,311,057-29,314,991 | - | C2H4g04887 | CX4g036192 | LOC_Os04g56400 | Os04g0659100 | - | Detail |
| C1H4g14313 | 4:29,315,932-29,318,966 | - | C2H4g04584 | CX4g033838 | LOC_Os04g56405 | Os04g0659150 | - | Detail |
| C1H4g16762 | 4:29,318,801-29,321,597 | + | - | - | - | - | - | Detail |
| C1H4g07874 | 4:29,332,150-29,336,420 | + | C2H4g27064 | CX4g035777 | LOC_Os04g56440 | Os04g0659400 | - | Detail |
| C1H4g27386 | 4:29,336,788-29,340,898 | - | C2H4g24328 | CX4g036481 | LOC_Os04g56450 | Os04g0659500 | - | Detail |
| C1H4g14580 | 4:29,343,264-29,344,325 | + | C2H4g10685 | - | LOC_Os04g56460 | Os04g0625600 | - | Detail |
| C1H4g18216 | 4:29,347,249-29,349,605 | + | C2H4g12106 | CX4g034160 | LOC_Os04g56470 | Os04g0659800 | OsAAP14 | Detail |
| C1H4g27663 | 4:29,350,119-29,357,662 | + | C2H4g12958 | CX4g035966 | LOC_Os04g56480 | Os04g0659900 | LML1, OsPELOTA, splHM47, spl<sup>HM47</sup> | Detail |
| C1H4g08060 | 4:29,387,304-29,393,142 | - | C2H4g24952 | CX4g036525 | LOC_Os04g56510 | Os04g0660200 | - | Detail |
| C1H4g00868 | 4:29,394,939-29,397,084 | + | C2H4g30016 | CX4g036101 | LOC_Os04g56520 | Os04g0660400 | - | Detail |
| C1H4g10729 | 4:29,397,514-29,409,092 | - | C2H4g26135 | CX4g035137 | LOC_Os04g56530 | Os04g0660500 | OsMAPKKKε | Detail |
| C1H4g10414 | 4:29,410,932-29,413,204 | - | C2H4g29217 | - | LOC_Os04g56540 | Os04g0660600 | - | Detail |
| C1H4g30756 | 4:29,418,480-29,421,170 | + | C2H4g17344 | CX4g033242 | LOC_Os04g56560 | Os04g0660900 | - | Detail |
| C1H4g23437 | 4:29,422,380-29,423,153 | - | C2H4g20585 | CX4g035810 | LOC_Os04g56570 | Os04g0661100 | - | Detail |
| C1H4g26877 | 4:29,423,924-29,435,866 | - | C2H4g16922 | CX4g032179 | LOC_Os04g56590 | Os04g0661200 | OsIPK1 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g06628 | 6:745,272-745,916 | + | - | - | LOC_Os06g03030 | Os06g0121000 | - | Detail |
| C2H6g16064 | 6:756,031-758,445 | + | C1H6g23901 | CX6g044277 | LOC_Os06g03380 | Os06g0121200 | - | Detail |
| C2H6g08915 | 6:760,970-761,647 | - | - | CX6g045329 | LOC_Os06g03099 | Os06g0121650 | - | Detail |
| C2H6g24234 | 6:762,941-763,540 | + | - | CX6g043160 | LOC_Os06g03070 | Os06g0121400 | - | Detail |
| C2H6g20377 | 6:767,087-768,625 | + | C1H6g30566 | CX6g045343 | LOC_Os06g03120 | Os06g0121800 | - | Detail |
| C2H6g13502 | 6:773,171-775,570 | + | C1H6g23901 | CX6g045540 | LOC_Os06g03380 | Os06g0122200 | - | Detail |
| C2H6g19065 | 6:797,884-800,313 | + | C1H6g23655 | CX6g041830 | LOC_Os06g03380 | Os06g0124300 | - | Detail |
| C2H6g08526 | 6:801,156-801,539 | + | - | CX6g042474 | LOC_Os06g03390 | Os06g0124400 | - | Detail |
| C2H6g16920 | 6:807,038-809,648 | + | C1H6g04642 | - | LOC_Os06g03486 | Os06g0124900 | - | Detail |
| C2H6g10660 | 6:812,722-816,702 | - | C1H6g10351 | CX6g042775 | LOC_Os06g03500 | Os06g0125000 | - | Detail |
| C2H6g17434 | 6:824,637-827,292 | + | C1H6g04642 | - | LOC_Os06g03486 | Os06g0124900 | - | Detail |
| C2H6g04513 | 6:830,724-831,291 | + | C1H6g27255 | CX6g045132 | LOC_Os06g03520 | Os06g0125200 | OsFLZ18 | Detail |
| C2H6g27787 | 6:832,275-833,882 | + | C1H6g10569 | CX6g044592 | LOC_Os06g03530 | Os06g0125300 | - | Detail |
| C2H6g11024 | 6:834,085-838,325 | - | C1H6g05009 | CX6g041892 | LOC_Os06g03540 | Os06g0125400 | - | Detail |
| C2H6g02805 | 6:840,704-844,383 | - | C1H6g31112 | CX6g045543 | LOC_Os06g03560 | Os06g0125500 | OsGT1, OsOPT3 | Detail |
| C2H6g24048 | 6:847,756-849,507 | + | C1H6g22566 | CX6g043617 | LOC_Os06g03570 | Os06g0125600 | - | Detail |
| C2H6g27449 | 6:853,985-855,737 | + | C1H6g09651 | CX6g043217 | LOC_Os06g03580 | Os06g0125800 | OsBBI1 | Detail |
| C2H6g25756 | 6:859,640-866,325 | - | C1H6g19209 | CX6g044218 | LOC_Os06g03600 | Os06g0126000 | - | Detail |
| C2H6g20246 | 6:868,803-871,340 | - | C1H6g09684 | CX6g044942 | LOC_Os06g03610 | Os06g0126250 | RLCK193, RUPO | Detail |
| C2H6g02139 | 6:874,708-875,630 | - | C1H6g19250 | CX6g044825 | LOC_Os06g03630 | Os06g0126400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |