| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g12359 | 4:29,060,180-29,064,046 | + | C2H4g04898 | CX4g031647 | LOC_Os04g55970 | Os04g0653600 | - | Detail |
| C1H4g06436 | 4:29,084,212-29,084,921 | - | C2H4g01694 | CX4g035335 | LOC_Os04g56030 | Os04g0654400 | - | Detail |
| C1H4g19526 | 4:29,086,455-29,087,699 | - | - | - | - | - | - | Detail |
| C1H4g26365 | 4:29,087,709-29,087,958 | - | C2H4g13579 | CX4g032215 | LOC_Os04g56040 | Os04g0654400 | - | Detail |
| C1H4g14701 | 4:29,095,529-29,100,751 | + | C2H4g22020 | CX4g031454 | LOC_Os04g56060 | Os04g0654600 | - | Detail |
| C1H4g02690 | 4:29,105,704-29,108,566 | + | C2H4g06510 | - | LOC_Os04g56070 | Os04g0654700 | - | Detail |
| C1H4g04876 | 4:29,132,097-29,133,654 | + | C2H4g14879 | CX4g032288 | LOC_Os04g56110 | Os04g0655300 | OsRLCK168 | Detail |
| C1H4g27782 | 4:29,134,415-29,135,782 | - | C2H4g10579 | CX4g033679 | LOC_Os04g56120 | Os04g0655400 | - | Detail |
| C1H4g18262 | 4:29,145,154-29,152,242 | + | C2H4g24407 | CX4g031873 | LOC_Os04g56140 | Os04g0655600 | - | Detail |
| C1H4g07256 | 4:29,153,406-29,154,005 | - | C2H4g23648 | CX4g036135 | LOC_Os04g56150 | Os04g0655700 | - | Detail |
| C1H4g27387 | 4:29,179,111-29,184,519 | + | C2H4g12431 | CX4g033091 | LOC_Os04g56160 | Os04g0656100 | - | Detail |
| C1H4g17338 | 4:29,208,708-29,212,138 | + | C2H4g21456 | CX4g034325 | LOC_Os04g56170 | Os04g0656500 | OsLG1, OsSPL8 | Detail |
| C1H4g19360 | 4:29,219,703-29,223,608 | - | C2H4g20311 | CX4g033823 | LOC_Os04g56180 | Os04g0656800 | - | Detail |
| C1H4g05427 | 4:29,224,512-29,228,988 | - | C2H4g17027 | - | - | Os04g0657000 | - | Detail |
| C1H4g18163 | 4:29,230,405-29,233,045 | - | C2H4g00900 | CX4g034897 | LOC_Os04g56210 | Os04g0657100 | OsFPS5 | Detail |
| C1H4g04914 | 4:29,235,625-29,239,340 | - | C2H4g05232 | CX4g034884 | LOC_Os04g56230 | Os04g0657300 | OsFPS4 | Detail |
| C1H4g03636 | 4:29,241,018-29,243,703 | + | C2H4g13688 | CX4g032268 | LOC_Os04g56240 | Os04g0657500 | - | Detail |
| C1H4g26663 | 4:29,258,289-29,258,575 | + | C2H4g02039 | CX4g034791 | - | Os04g0657900 | - | Detail |
| C1H4g30184 | 4:29,260,810-29,268,111 | + | C2H4g18005 | CX4g031899 | LOC_Os04g56290 | Os04g0658000 | - | Detail |
| C1H4g18631 | 4:29,274,679-29,278,550 | - | C2H4g30081 | - | LOC_Os04g56309 | Os04g0658200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g12947 | 2:24,233,161-24,234,705 | + | C1H2g17222 | CX2g024545 | LOC_Os02g43150 | Os02g0645600 | - | Detail |
| C2H2g06445 | 2:24,233,462-24,234,668 | - | - | - | - | - | - | Detail |
| C2H2g19622 | 2:24,259,273-24,260,767 | + | C1H2g19085 | CX2g024814 | LOC_Os02g43170 | Os02g0646200 | - | Detail |
| C2H2g11300 | 2:24,263,567-24,265,648 | + | C1H2g22786 | CX2g024271 | LOC_Os02g43180 | Os02g0646400 | - | Detail |
| C2H2g09061 | 2:24,266,639-24,273,222 | - | C1H2g07582 | CX2g020293 | LOC_Os02g43194 | Os02g0646500 | - | Detail |
| C2H2g19522 | 2:24,279,488-24,279,739 | + | - | CX1g001923 | - | - | - | Detail |
| C2H2g08863 | 2:24,284,183-24,286,281 | + | - | - | - | - | - | Detail |
| C2H2g25954 | 2:24,286,941-24,288,260 | - | C1H2g22254 | CX2g019582 | LOC_Os02g43250 | Os02g0647300 | - | Detail |
| C2H2g12985 | 2:24,301,822-24,307,280 | + | C1H2g05654 | CX2g024426 | LOC_Os02g43280 | Os02g0647900 | - | Detail |
| C2H2g29445 | 2:24,313,328-24,314,531 | - | C1H2g13691 | CX2g021973 | LOC_Os02g43290 | Os02g0648100 | - | Detail |
| C2H2g03827 | 2:24,330,368-24,333,423 | - | C1H2g15207 | CX2g020713 | LOC_Os02g43300 | Os02g0648300 | - | Detail |
| C2H2g24370 | 2:24,363,625-24,364,119 | - | - | - | - | - | - | Detail |
| C2H2g11895 | 2:24,372,313-24,373,186 | + | C1H2g25916 | CX2g019169 | LOC_Os02g43330 | Os02g0649300 | HOX24, Oshox24, OsHox24, OsSLI1 | Detail |
| C2H2g11536 | 2:24,376,090-24,380,365 | - | C1H2g29202 | CX2g021953 | LOC_Os02g43340 | Os02g0649400 | - | Detail |
| C2H2g22971 | 2:24,381,650-24,382,018 | + | - | CX2g020014 | - | - | - | Detail |
| C2H2g04607 | 2:24,383,987-24,390,208 | + | C1H2g22654 | CX2g021451 | LOC_Os02g43350 | Os02g0649700 | - | Detail |
| C2H2g04813 | 2:24,391,339-24,392,027 | - | C1H2g29127 | CX2g024526 | LOC_Os02g43360 | Os02g0649800 | - | Detail |
| C2H2g23002 | 2:24,396,962-24,400,823 | - | C1H2g17207 | CX2g022915 | LOC_Os02g43370 | Os02g0649900 | YSL2, OsYSL2, Os-YSL2, OsYs6 | Detail |
| C2H2g12264 | 2:24,406,147-24,409,852 | - | C1H2g09379 | CX2g019779 | LOC_Os02g43410 | Os02g0650300 | - | Detail |
| C2H2g21909 | 2:24,420,946-24,421,182 | + | - | CX2g022293 | LOC_Os02g43420 | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |