| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g12359 | 4:29,060,180-29,064,046 | + | C2H4g04898 | CX4g031647 | LOC_Os04g55970 | Os04g0653600 | - | Detail |
| C1H4g06436 | 4:29,084,212-29,084,921 | - | C2H4g01694 | CX4g035335 | LOC_Os04g56030 | Os04g0654400 | - | Detail |
| C1H4g19526 | 4:29,086,455-29,087,699 | - | - | - | - | - | - | Detail |
| C1H4g26365 | 4:29,087,709-29,087,958 | - | C2H4g13579 | CX4g032215 | LOC_Os04g56040 | Os04g0654400 | - | Detail |
| C1H4g14701 | 4:29,095,529-29,100,751 | + | C2H4g22020 | CX4g031454 | LOC_Os04g56060 | Os04g0654600 | - | Detail |
| C1H4g02690 | 4:29,105,704-29,108,566 | + | C2H4g06510 | - | LOC_Os04g56070 | Os04g0654700 | - | Detail |
| C1H4g04876 | 4:29,132,097-29,133,654 | + | C2H4g14879 | CX4g032288 | LOC_Os04g56110 | Os04g0655300 | OsRLCK168 | Detail |
| C1H4g27782 | 4:29,134,415-29,135,782 | - | C2H4g10579 | CX4g033679 | LOC_Os04g56120 | Os04g0655400 | - | Detail |
| C1H4g18262 | 4:29,145,154-29,152,242 | + | C2H4g24407 | CX4g031873 | LOC_Os04g56140 | Os04g0655600 | - | Detail |
| C1H4g07256 | 4:29,153,406-29,154,005 | - | C2H4g23648 | CX4g036135 | LOC_Os04g56150 | Os04g0655700 | - | Detail |
| C1H4g27387 | 4:29,179,111-29,184,519 | + | C2H4g12431 | CX4g033091 | LOC_Os04g56160 | Os04g0656100 | - | Detail |
| C1H4g17338 | 4:29,208,708-29,212,138 | + | C2H4g21456 | CX4g034325 | LOC_Os04g56170 | Os04g0656500 | OsLG1, OsSPL8 | Detail |
| C1H4g19360 | 4:29,219,703-29,223,608 | - | C2H4g20311 | CX4g033823 | LOC_Os04g56180 | Os04g0656800 | - | Detail |
| C1H4g05427 | 4:29,224,512-29,228,988 | - | C2H4g17027 | - | - | Os04g0657000 | - | Detail |
| C1H4g18163 | 4:29,230,405-29,233,045 | - | C2H4g00900 | CX4g034897 | LOC_Os04g56210 | Os04g0657100 | OsFPS5 | Detail |
| C1H4g04914 | 4:29,235,625-29,239,340 | - | C2H4g05232 | CX4g034884 | LOC_Os04g56230 | Os04g0657300 | OsFPS4 | Detail |
| C1H4g03636 | 4:29,241,018-29,243,703 | + | C2H4g13688 | CX4g032268 | LOC_Os04g56240 | Os04g0657500 | - | Detail |
| C1H4g26663 | 4:29,258,289-29,258,575 | + | C2H4g02039 | CX4g034791 | - | Os04g0657900 | - | Detail |
| C1H4g30184 | 4:29,260,810-29,268,111 | + | C2H4g18005 | CX4g031899 | LOC_Os04g56290 | Os04g0658000 | - | Detail |
| C1H4g18631 | 4:29,274,679-29,278,550 | - | C2H4g30081 | - | LOC_Os04g56309 | Os04g0658200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g00290 | 1:5,680,263-5,680,658 | + | C1H1g09690 | CX1g005289 | LOC_Os01g11860 | Os01g0217500 | - | Detail |
| C2H1g04999 | 1:5,683,643-5,686,368 | + | C1H1g24673 | CX1g006272 | LOC_Os01g11880 | Os01g0217800 | - | Detail |
| C2H1g26585 | 1:5,694,890-5,706,732 | + | C1H1g21326 | CX1g006867 | LOC_Os01g11900 | Os01g0218032 | ROS1A, ROS1a, OsROS1, TA2 | Detail |
| C2H1g12652 | 1:5,714,986-5,715,949 | + | C1H1g12724 | CX1g003932 | LOC_Os01g11910 | Os01g0218100 | - | Detail |
| C2H1g17909 | 1:5,723,198-5,728,233 | + | C1H1g09961 | CX1g004539 | LOC_Os01g11920 | Os01g0218200 | - | Detail |
| C2H1g16216 | 1:5,735,888-5,738,164 | + | C1H8g13175 | CX1g006461 | LOC_Os01g18920 | - | - | Detail |
| C2H1g10690 | 1:5,744,235-5,749,317 | + | C1H1g30290 | CX1g000608 | LOC_Os01g11940 | Os01g0218500 | - | Detail |
| C2H1g22932 | 1:5,751,016-5,757,148 | - | C1H1g21863 | CX1g003540 | LOC_Os01g11946 | Os01g0218700 | - | Detail |
| C2H1g17937 | 1:5,757,524-5,770,829 | - | C1H1g28664 | CX1g000915 | LOC_Os01g11960 | Os01g0218900 | - | Detail |
| C2H1g09244 | 1:5,782,770-5,783,516 | + | C1H1g00514 | CX1g004702 | LOC_Os01g11970 | Os01g0219000 | - | Detail |
| C2H1g22718 | 1:5,784,729-5,786,591 | + | C1H1g27900 | CX1g003171 | LOC_Os01g11980 | Os01g0219100 | - | Detail |
| C2H1g24979 | 1:5,788,027-5,790,966 | + | C1H1g26992 | CX1g000508 | LOC_Os01g11990 | Os01g0219200 | ZYGO1 | Detail |
| C2H1g04486 | 1:5,794,028-5,794,585 | + | - | CX1g003538 | LOC_Os01g12000 | Os01g0219300 | - | Detail |
| C2H1g07180 | 1:5,800,293-5,800,649 | + | C1H1g22028 | CX1g005007 | LOC_Os01g12020 | Os01g0219500 | OsLTPL18 | Detail |
| C2H1g00052 | 1:5,801,729-5,804,473 | - | C1H1g09843 | CX1g005138 | LOC_Os01g12030 | Os01g0219600 | - | Detail |
| C2H1g03412 | 1:5,814,319-5,817,356 | - | C1H1g27823 | CX1g005599 | LOC_Os01g12070 | Os01g0220100 | OsCel9A | Detail |
| C2H1g01177 | 1:5,821,247-5,828,091 | - | C1H1g03057 | CX1g001222 | LOC_Os01g12080 | Os01g0220200 | - | Detail |
| C2H1g26925 | 1:5,835,272-5,838,341 | + | C1H1g21223 | CX1g003024 | LOC_Os01g12090 | Os01g0220300 | - | Detail |
| C2H1g24533 | 1:5,838,883-5,839,386 | - | C1H1g15416 | - | - | Os01g0220400 | - | Detail |
| C2H1g24521 | 1:5,842,627-5,843,755 | - | C1H1g25550 | CX1g004887 | LOC_Os01g12110 | Os01g0220500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |