| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g31873 | 1:21,447,547-21,451,562 | - | C2H1g07729 | CX1g003269 | LOC_Os01g42070 | Os01g0605500 | - | Detail |
| C1H1g20019 | 1:21,453,746-21,458,564 | + | C2H1g10885 | CX1g006387 | LOC_Os01g42080 | Os01g0605650 | - | Detail |
| C1H1g31095 | 1:21,459,790-21,461,953 | + | C2H1g20017 | CX1g006487 | LOC_Os01g42090 | Os01g0605700 | - | Detail |
| C1H1g31279 | 1:21,470,797-21,472,835 | + | C2H1g28445 | CX1g005982 | LOC_Os01g42110 | Os01g0606000 | - | Detail |
| C1H1g21555 | 1:21,475,989-21,476,757 | + | C2H1g04496 | - | LOC_Os01g42120 | Os01g0606050 | - | Detail |
| C1H1g22990 | 1:21,483,557-21,483,982 | - | C2H1g14040 | CX1g005526 | LOC_Os01g42160 | Os01g0606200 | - | Detail |
| C1H1g04716 | 1:21,492,673-21,493,817 | + | C2H1g02609 | CX1g003079 | LOC_Os01g42190 | Os01g0606900 | - | Detail |
| C1H1g16043 | 1:21,496,822-21,498,635 | + | C2H1g01517 | CX1g001557 | LOC_Os01g42210 | Os01g0607100 | OsLTP47 | Detail |
| C1H1g20659 | 1:21,502,331-21,512,960 | + | C2H1g06379 | CX1g006536 | LOC_Os01g42234 | Os01g0607200 | - | Detail |
| C1H1g27828 | 1:21,513,826-21,516,144 | + | C2H1g15867 | CX1g004927 | - | Os01g0607300 | - | Detail |
| C1H1g05783 | 1:21,518,993-21,530,536 | - | C2H1g24915 | CX1g005806 | LOC_Os01g42260 | Os01g0607400 | - | Detail |
| C1H1g11523 | 1:21,533,017-21,537,846 | - | C2H1g17050 | CX1g005339 | LOC_Os01g42270 | Os01g0607600 | - | Detail |
| C1H1g12198 | 1:21,550,185-21,552,023 | + | C2H1g29382 | CX1g006801 | LOC_Os01g42280 | Os01g0607800 | - | Detail |
| C1H1g00531 | 1:21,556,682-21,562,769 | - | C2H1g11875 | CX1g003638 | LOC_Os01g42294 | Os01g0607900 | - | Detail |
| C1H1g31773 | 1:21,578,418-21,579,239 | + | C2H1g21798 | CX1g004840 | LOC_Os01g42320 | Os01g0140100 | - | Detail |
| C1H1g18329 | 1:21,580,495-21,581,147 | + | - | - | - | - | - | Detail |
| C1H1g13748 | 1:21,583,381-21,591,715 | - | C2H1g08894 | CX1g001820 | LOC_Os01g42350 | Os01g0609000 | - | Detail |
| C1H1g27835 | 1:21,599,018-21,607,145 | - | C2H1g05503 | CX1g001440 | LOC_Os01g42370 | Os01g0609200 | - | Detail |
| C1H1g11573 | 1:21,608,602-21,615,538 | - | C2H1g10771 | CX1g006062 | LOC_Os01g42380 | Os01g0609300 | - | Detail |
| C1H1g18561 | 1:21,633,333-21,634,349 | - | C2H1g14232 | CX1g006250 | LOC_Os01g42400 | Os01g0284300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H12g16031 | 12:4,495,209-4,495,847 | - | C1H12g00057 | CX12g018011 | - | - | - | Detail |
| C2H12g13338 | 12:4,504,009-4,509,180 | - | C1H12g21936 | CX12g015241 | LOC_Os12g09700 | Os12g0198700 | - | Detail |
| C2H12g07984 | 12:4,516,918-4,520,606 | + | C1H12g18620 | CX12g018163 | LOC_Os12g09710 | Os12g0198900 | - | Detail |
| C2H12g13398 | 12:4,522,686-4,525,643 | - | C1H12g20422 | CX12g016268 | LOC_Os12g09700 | Os12g0198700 | - | Detail |
| C2H12g09085 | 12:4,531,956-4,542,029 | - | C1H12g03660 | CX12g016763 | LOC_Os12g10460 | Os12g0199100 | - | Detail |
| C2H12g25382 | 12:4,561,839-4,565,485 | + | C1H12g18718 | - | - | - | - | Detail |
| C2H12g21993 | 12:4,568,789-4,571,070 | + | C1H12g29942 | CX12g015724 | LOC_Os12g10170 | Os12g0199500 | - | Detail |
| C2H12g02513 | 12:4,596,026-4,598,793 | - | C1H12g23734 | CX12g017268 | LOC_Os11g14670 | - | - | Detail |
| C2H12g06069 | 12:4,610,752-4,611,165 | - | C1H12g26851 | - | - | - | - | Detail |
| C2H12g23156 | 12:4,724,987-4,726,528 | + | C1H12g08099 | CX12g015438 | LOC_Os12g10140 | Os12g0202700 | - | Detail |
| C2H12g10521 | 12:4,727,388-4,728,439 | + | C1H12g25986 | CX12g015438 | LOC_Os12g10170 | Os12g0240900 | NOMT, OsNOMT, COMTL3, OsCOMTL3 | Detail |
| C2H12g28534 | 12:4,729,007-4,735,179 | - | C1H12g24838 | CX12g018391 | LOC_Os12g10180 | Os12g0202900 | - | Detail |
| C2H12g14596 | 12:4,736,631-4,738,688 | + | C1H12g13815 | CX12g015359 | LOC_Os12g10184 | Os12g0202850 | PGL12 | Detail |
| C2H12g19800 | 12:4,739,696-4,743,084 | + | C1H12g15070 | CX12g015359 | LOC_Os12g10190 | Os12g0203000 | - | Detail |
| C2H12g26432 | 12:4,744,095-4,746,553 | - | C1H12g07643 | CX12g015476 | LOC_Os12g10200 | Os12g0203100 | - | Detail |
| C2H12g29948 | 12:4,750,872-4,752,957 | + | C1H12g30565 | CX12g018695 | LOC_Os12g10220 | Os12g0203200 | - | Detail |
| C2H12g27282 | 12:4,780,000-4,780,482 | + | C1H12g14694 | CX12g017473 | LOC_Os12g10260 | Os12g0204000 | - | Detail |
| C2H12g03169 | 12:4,781,447-4,786,377 | + | C1H12g14346 | CX12g017473 | LOC_Os12g10270 | Os12g0632401 | - | Detail |
| C2H12g06639 | 12:4,791,041-4,794,004 | + | C1H12g25521 | CX12g015937 | LOC_Os12g10280 | Os12g0204100 | - | Detail |
| C2H12g05093 | 12:4,816,407-4,818,311 | - | C1H12g12793 | CX12g017749 | LOC_Os12g10330 | Os12g0204600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |