| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g18694 | 4:28,658,302-28,658,889 | - | C2H4g14418 | CX4g032908 | LOC_Os04g55240 | Os04g0645200 | - | Detail |
| C1H4g06884 | 4:28,663,063-28,666,905 | - | C2H4g01093 | CX4g036437 | LOC_Os04g55260 | Os04g0645600 | - | Detail |
| C1H4g28592 | 4:28,673,122-28,676,448 | - | C2H4g27076 | CX4g032085 | LOC_Os04g55280 | Os04g0646050 | - | Detail |
| C1H4g12666 | 4:28,677,201-28,678,644 | - | C2H4g00324 | CX4g031654 | LOC_Os04g55290 | Os04g0646100 | - | Detail |
| C1H4g04933 | 4:28,710,655-28,711,314 | - | C2H4g28891 | CX4g032699 | LOC_Os04g55360 | Os04g0647300 | - | Detail |
| C1H4g01013 | 4:28,713,036-28,713,869 | - | C2H4g25523 | CX4g032699 | LOC_Os04g55360 | Os04g0647300 | - | Detail |
| C1H4g17955 | 4:28,734,525-28,738,568 | - | C2H4g00723 | CX4g032705 | LOC_Os04g55410 | Os04g0647800 | - | Detail |
| C1H4g25822 | 4:28,741,443-28,744,608 | + | C2H4g03628 | CX4g034505 | LOC_Os04g55420 | Os04g0647900 | - | Detail |
| C1H4g16013 | 4:28,750,055-28,750,903 | + | C2H4g20686 | CX4g034215 | LOC_Os04g55440 | Os04g0648200 | - | Detail |
| C1H4g25119 | 4:28,755,593-28,760,287 | - | C2H4g26419 | CX4g031467 | LOC_Os04g55480 | Os04g0648500 | - | Detail |
| C1H4g03048 | 4:28,765,828-28,772,012 | + | C2H4g12616 | CX4g032703 | LOC_Os04g55500 | Os04g0648700 | - | Detail |
| C1H4g02593 | 4:28,781,088-28,786,577 | + | C2H4g21483 | CX4g033088 | LOC_Os04g55510 | Os04g0648800 | - | Detail |
| C1H4g09680 | 4:28,821,780-28,824,455 | + | C2H4g14278 | CX4g036135 | LOC_Os04g55560 | Os04g0649100 | SHAT1, AP2/EREBP#043, AP2/EREBP43 | Detail |
| C1H4g00144 | 4:28,830,435-28,836,457 | + | C2H4g17474 | CX4g035239 | LOC_Os04g55570 | Os04g0649200 | - | Detail |
| C1H4g30735 | 4:28,845,828-28,846,709 | - | C2H4g02532 | CX4g032527 | LOC_Os04g55590 | Os04g0649400 | WOX4, OsWOX4, Os WOX4 | Detail |
| C1H4g22307 | 4:28,858,617-28,859,324 | + | C2H4g01325 | - | - | - | - | Detail |
| C1H4g26510 | 4:28,860,405-28,863,982 | - | C2H4g00524 | CX4g031472 | LOC_Os04g55620 | Os04g0649700 | - | Detail |
| C1H4g26377 | 4:28,867,909-28,868,871 | + | C2H4g24247 | CX4g033189 | LOC_Os04g55640 | Os04g0649900 | - | Detail |
| C1H4g19253 | 4:28,875,233-28,877,176 | + | C2H4g10875 | CX4g032778 | - | - | - | Detail |
| C1H4g30646 | 4:28,877,801-28,881,460 | - | C2H4g01573 | CX4g032034 | LOC_Os04g55650 | Os04g0650000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H7g27182 | 7:10,859,526-10,862,261 | - | C1H7g28116 | CX7g047439 | LOC_Os07g22580 | Os07g0408500 | - | Detail |
| C2H7g08926 | 7:10,881,716-10,888,365 | - | C1H7g30990 | CX7g049821 | LOC_Os07g22600 | Os07g0408700 | - | Detail |
| C2H7g25744 | 7:10,905,182-10,918,433 | + | C1H7g08893 | CX7g049705 | LOC_Os07g22640 | Os07g0409100 | OsSYT-5 | Detail |
| C2H7g01182 | 7:10,920,846-10,925,254 | + | C1H7g11723 | CX7g049428 | LOC_Os07g22650 | Os07g0409200 | - | Detail |
| C2H7g07900 | 7:10,931,197-10,932,924 | - | - | CX7g048345 | LOC_Os07g22670 | Os07g0409400 | - | Detail |
| C2H7g29173 | 7:10,936,504-10,937,055 | + | C1H7g10880 | CX7g050099 | LOC_Os07g22680 | Os07g0409500 | - | Detail |
| C2H7g17765 | 7:10,941,693-10,942,406 | + | C1H7g09042 | CX7g050099 | LOC_Os07g22680 | Os07g0144900 | - | Detail |
| C2H7g02442 | 7:10,945,263-10,951,147 | - | C1H7g15573 | CX7g047683 | LOC_Os07g22700 | Os07g0409700 | - | Detail |
| C2H7g05460 | 7:10,969,368-10,978,012 | - | C1H7g14776 | CX7g047643 | LOC_Os07g22710 | Os07g0409900 | - | Detail |
| C2H7g06667 | 7:10,988,361-10,996,074 | - | C1H7g10366 | CX7g047493 | LOC_Os07g22720 | Os07g0410100 | - | Detail |
| C2H7g30040 | 7:11,004,063-11,004,734 | - | C1H7g02269 | CX7g048430 | LOC_Os07g22730 | Os07g0410700 | - | Detail |
| C2H7g26113 | 7:11,022,425-11,023,144 | - | C1H7g02269 | CX7g049827 | LOC_Os07g22770 | Os07g0410700 | - | Detail |
| C2H7g20330 | 7:11,047,330-11,047,593 | - | C1H7g17880 | CX7g049102 | - | Os07g0411250 | - | Detail |
| C2H7g19172 | 7:11,048,389-11,048,643 | + | - | CX7g047430 | LOC_Os07g22840 | Os07g0411200 | - | Detail |
| C2H7g21786 | 7:11,050,136-11,051,511 | - | C1H7g25392 | CX7g049471 | LOC_Os07g22850 | Os07g0411300 | OsPKS2 | Detail |
| C2H7g00323 | 7:11,072,187-11,079,541 | - | C1H7g02385 | CX7g050392 | LOC_Os07g22930 | Os07g0412100 | GBSSII | Detail |
| C2H7g00343 | 7:11,095,794-11,099,816 | + | C1H7g16098 | CX7g049378 | LOC_Os07g22950 | Os07g0412400 | - | Detail |
| C2H7g23690 | 7:11,110,356-11,121,111 | + | C1H7g14122 | CX7g046574 | LOC_Os07g23110 | Os07g0413700 | OsPARP1.2 | Detail |
| C2H7g01947 | 7:11,131,844-11,132,689 | - | - | CX7g046554 | LOC_Os07g23120 | Os07g0413800 | - | Detail |
| C2H7g16215 | 7:11,143,480-11,144,886 | + | C1H7g16311 | CX7g049143 | LOC_Os07g23150 | Os07g0414000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |