| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g18694 | 4:28,658,302-28,658,889 | - | C2H4g14418 | CX4g032908 | LOC_Os04g55240 | Os04g0645200 | - | Detail |
| C1H4g06884 | 4:28,663,063-28,666,905 | - | C2H4g01093 | CX4g036437 | LOC_Os04g55260 | Os04g0645600 | - | Detail |
| C1H4g28592 | 4:28,673,122-28,676,448 | - | C2H4g27076 | CX4g032085 | LOC_Os04g55280 | Os04g0646050 | - | Detail |
| C1H4g12666 | 4:28,677,201-28,678,644 | - | C2H4g00324 | CX4g031654 | LOC_Os04g55290 | Os04g0646100 | - | Detail |
| C1H4g04933 | 4:28,710,655-28,711,314 | - | C2H4g28891 | CX4g032699 | LOC_Os04g55360 | Os04g0647300 | - | Detail |
| C1H4g01013 | 4:28,713,036-28,713,869 | - | C2H4g25523 | CX4g032699 | LOC_Os04g55360 | Os04g0647300 | - | Detail |
| C1H4g17955 | 4:28,734,525-28,738,568 | - | C2H4g00723 | CX4g032705 | LOC_Os04g55410 | Os04g0647800 | - | Detail |
| C1H4g25822 | 4:28,741,443-28,744,608 | + | C2H4g03628 | CX4g034505 | LOC_Os04g55420 | Os04g0647900 | - | Detail |
| C1H4g16013 | 4:28,750,055-28,750,903 | + | C2H4g20686 | CX4g034215 | LOC_Os04g55440 | Os04g0648200 | - | Detail |
| C1H4g25119 | 4:28,755,593-28,760,287 | - | C2H4g26419 | CX4g031467 | LOC_Os04g55480 | Os04g0648500 | - | Detail |
| C1H4g03048 | 4:28,765,828-28,772,012 | + | C2H4g12616 | CX4g032703 | LOC_Os04g55500 | Os04g0648700 | - | Detail |
| C1H4g02593 | 4:28,781,088-28,786,577 | + | C2H4g21483 | CX4g033088 | LOC_Os04g55510 | Os04g0648800 | - | Detail |
| C1H4g09680 | 4:28,821,780-28,824,455 | + | C2H4g14278 | CX4g036135 | LOC_Os04g55560 | Os04g0649100 | SHAT1, AP2/EREBP#043, AP2/EREBP43 | Detail |
| C1H4g00144 | 4:28,830,435-28,836,457 | + | C2H4g17474 | CX4g035239 | LOC_Os04g55570 | Os04g0649200 | - | Detail |
| C1H4g30735 | 4:28,845,828-28,846,709 | - | C2H4g02532 | CX4g032527 | LOC_Os04g55590 | Os04g0649400 | WOX4, OsWOX4, Os WOX4 | Detail |
| C1H4g22307 | 4:28,858,617-28,859,324 | + | C2H4g01325 | - | - | - | - | Detail |
| C1H4g26510 | 4:28,860,405-28,863,982 | - | C2H4g00524 | CX4g031472 | LOC_Os04g55620 | Os04g0649700 | - | Detail |
| C1H4g26377 | 4:28,867,909-28,868,871 | + | C2H4g24247 | CX4g033189 | LOC_Os04g55640 | Os04g0649900 | - | Detail |
| C1H4g19253 | 4:28,875,233-28,877,176 | + | C2H4g10875 | CX4g032778 | - | - | - | Detail |
| C1H4g30646 | 4:28,877,801-28,881,460 | - | C2H4g01573 | CX4g032034 | LOC_Os04g55650 | Os04g0650000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g27506 | 6:2,837,533-2,838,097 | + | C1H6g17960 | CX6g041729 | - | - | - | Detail |
| C2H6g16420 | 6:2,850,644-2,852,146 | + | C1H6g19331 | CX6g044087 | LOC_Os06g07450 | Os06g0170866 | - | Detail |
| C2H6g11064 | 6:2,854,373-2,854,702 | + | C1H6g05846 | - | - | - | - | Detail |
| C2H6g12470 | 6:2,868,471-2,869,052 | + | - | CX6g045326 | LOC_Os06g07470 | Os06g0171500 | - | Detail |
| C2H6g12040 | 6:2,870,793-2,878,448 | - | C1H6g19224 | CX6g045600 | LOC_Os06g07474 | Os06g0171600 | - | Detail |
| C2H6g23378 | 6:2,878,719-2,880,475 | + | C1H6g18552 | CX6g042658 | LOC_Os06g07480 | Os06g0171700 | - | Detail |
| C2H6g24054 | 6:2,880,865-2,887,610 | - | C1H6g25044 | CX6g044064 | LOC_Os06g07490 | Os06g0171800 | - | Detail |
| C2H6g04632 | 6:2,890,445-2,897,166 | + | C1H6g16236 | CX6g042998 | LOC_Os06g07540 | Os06g0171900 | - | Detail |
| C2H6g18436 | 6:2,897,870-2,900,764 | + | C1H6g10657 | CX6g044733 | LOC_Os06g07550 | Os06g0172000 | - | Detail |
| C2H6g03204 | 6:2,907,092-2,907,799 | + | C1H6g08505 | CX6g045382 | LOC_Os06g07560 | Os06g0172200 | - | Detail |
| C2H6g06251 | 6:2,910,483-2,910,746 | + | C1H6g22975 | CX6g041584 | LOC_Os06g07580 | Os06g0172600 | - | Detail |
| C2H6g11115 | 6:2,928,887-2,932,329 | - | C1H6g28387 | CX6g045868 | LOC_Os06g07600 | Os06g0172800 | - | Detail |
| C2H6g28357 | 6:2,935,884-2,941,735 | + | C1H6g29081 | CX6g045385 | LOC_Os06g07620 | Os06g0173000 | - | Detail |
| C2H6g02209 | 6:2,943,784-2,948,442 | + | C1H6g24053 | CX6g043458 | LOC_Os06g07630 | Os06g0173100 | OsRpt5b | Detail |
| C2H6g14609 | 6:2,964,354-2,966,214 | - | C1H6g10438 | CX6g044658 | LOC_Os06g07700 | Os06g0173800 | - | Detail |
| C2H6g29331 | 6:2,987,280-2,989,272 | + | C1H6g24712 | CX6g041809 | LOC_Os06g07760 | Os06g0174300 | - | Detail |
| C2H6g13115 | 6:2,990,994-2,992,989 | + | C1H6g20008 | CX6g043121 | LOC_Os06g07770 | Os06g0174350 | - | Detail |
| C2H6g24511 | 6:2,996,113-3,002,335 | + | C1H6g25449 | CX6g043121 | LOC_Os06g07770 | Os06g0174375 | - | Detail |
| C2H6g26780 | 6:3,003,093-3,005,524 | - | C1H6g24998 | CX6g044484 | LOC_Os06g07780 | Os06g0174400 | - | Detail |
| C2H6g01504 | 6:3,009,091-3,009,282 | + | C1H6g18194 | - | LOC_Os06g07800 | Os06g0174900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |