| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g24297 | 4:28,344,421-28,345,035 | + | C2H4g00672 | CX4g036167 | LOC_Os04g54490 | Os04g0637300 | OsEFP1 | Detail |
| C1H4g14745 | 4:28,346,770-28,354,128 | + | C2H4g25987 | CX4g032005 | LOC_Os04g54500 | Os04g0637400 | - | Detail |
| C1H4g12494 | 4:28,359,800-28,361,477 | - | C2H4g09556 | CX4g033634 | LOC_Os04g54560 | Os04g0638100 | - | Detail |
| C1H4g04104 | 4:28,371,152-28,371,860 | - | C2H4g03681 | CX4g031761 | LOC_Os04g54590 | Os04g0638700 | - | Detail |
| C1H4g09803 | 4:28,383,624-28,383,918 | + | C2H4g04397 | CX4g035252 | LOC_Os04g54610 | Os04g0639000 | - | Detail |
| C1H4g30992 | 4:28,386,786-28,387,248 | + | C2H4g07968 | CX4g036497 | LOC_Os04g54620 | Os04g0639100 | - | Detail |
| C1H4g10736 | 4:28,388,777-28,389,469 | + | C2H4g28500 | CX4g033211 | LOC_Os04g54630 | Os04g0639200 | - | Detail |
| C1H4g01091 | 4:28,390,914-28,393,247 | - | C2H4g06202 | CX4g034099 | LOC_Os04g54640 | Os04g0639300 | - | Detail |
| C1H4g07903 | 4:28,394,150-28,396,068 | - | C2H4g15533 | CX4g031964 | LOC_Os04g54759 | Os04g0640300 | - | Detail |
| C1H4g03927 | 4:28,400,253-28,400,654 | - | - | - | - | - | - | Detail |
| C1H4g22371 | 4:28,404,292-28,411,781 | + | C2H4g02260 | CX4g036105 | LOC_Os04g54790 | Os04g0640500 | - | Detail |
| C1H4g26128 | 4:28,412,516-28,415,595 | - | C2H4g05866 | CX4g035804 | LOC_Os04g54800 | Os04g0640600 | OsSK3 | Detail |
| C1H4g06695 | 4:28,418,683-28,426,052 | - | C2H4g10958 | CX4g034360 | LOC_Os04g54810 | Os04g0640700 | - | Detail |
| C1H4g02933 | 4:28,432,053-28,434,410 | + | C2H4g21502 | CX4g032330 | LOC_Os04g54820 | Os04g0640800 | - | Detail |
| C1H4g19943 | 4:28,441,250-28,450,333 | + | C2H4g03331 | CX4g032488 | LOC_Os04g54840 | Os04g0641000 | - | Detail |
| C1H4g10104 | 4:28,458,029-28,460,155 | + | C2H4g03113 | CX4g034640 | LOC_Os04g54850 | Os04g0641200 | - | Detail |
| C1H4g28360 | 4:28,460,268-28,460,930 | + | C2H4g03113 | CX4g034640 | LOC_Os04g54850 | Os04g0641200 | - | Detail |
| C1H4g08062 | 4:28,465,899-28,469,386 | - | C2H4g12320 | CX4g034636 | LOC_Os04g54870 | Os04g0641400 | - | Detail |
| C1H4g25048 | 4:28,476,577-28,476,991 | - | C2H4g02939 | - | LOC_Os04g54900 | Os04g0641700 | OsILI1 | Detail |
| C1H4g05112 | 4:28,494,512-28,501,946 | - | C2H4g16501 | CX4g035146 | LOC_Os04g54930 | Os04g0642000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g03007 | 6:991,070-996,326 | + | C1H6g21402 | CX6g042396 | LOC_Os06g03800 | Os06g0128600 | - | Detail |
| C2H6g15041 | 6:998,362-999,039 | - | C1H6g22896 | CX6g043598 | LOC_Os06g03810 | Os06g0128800 | ROD1 | Detail |
| C2H6g15913 | 6:1,002,336-1,005,563 | + | - | CX6g043137 | LOC_Os06g03820 | Os06g0129000 | - | Detail |
| C2H6g21739 | 6:1,010,338-1,013,257 | + | C1H6g24553 | CX6g043087 | LOC_Os06g03830 | Os06g0129100 | - | Detail |
| C2H6g00876 | 6:1,015,118-1,016,419 | - | - | CX6g042312 | LOC_Os06g03840 | Os06g0129200 | - | Detail |
| C2H6g06428 | 6:1,018,526-1,021,414 | - | C1H6g11331 | CX6g041241 | LOC_Os06g03850 | Os06g0129300 | - | Detail |
| C2H6g25282 | 6:1,025,384-1,032,007 | + | C1H6g29259 | CX6g042701 | LOC_Os06g03860 | Os06g0129400 | OsSPX-MFS3 | Detail |
| C2H6g21225 | 6:1,036,037-1,038,517 | - | C1H6g00193 | CX6g043110 | LOC_Os06g03910 | Os06g0129700 | OsNUDX14 | Detail |
| C2H6g26298 | 6:1,040,115-1,041,676 | + | C1H6g17530 | CX6g045939 | LOC_Os06g03920 | Os06g0129800 | - | Detail |
| C2H6g20963 | 6:1,041,832-1,045,573 | - | C1H6g17973 | CX6g041936 | LOC_Os06g03930 | Os06g0129900 | - | Detail |
| C2H6g21946 | 6:1,047,999-1,055,626 | + | C1H6g16816 | CX6g042961 | LOC_Os06g03940 | Os06g0130000 | - | Detail |
| C2H6g29452 | 6:1,068,622-1,076,045 | + | C1H6g10621 | CX6g045059 | LOC_Os06g03970 | Os06g0130100 | - | Detail |
| C2H6g19930 | 6:1,077,962-1,083,480 | - | C1H6g10956 | CX6g044073 | LOC_Os06g03980 | Os06g0130200 | - | Detail |
| C2H6g06199 | 6:1,093,955-1,097,863 | + | C1H6g25934 | CX6g042850 | LOC_Os06g03990 | Os06g0130400 | SSG6, OsACS6 | Detail |
| C2H6g01425 | 6:1,098,428-1,098,999 | + | C1H6g22047 | CX6g045112 | LOC_Os06g04000 | Os06g0130500 | - | Detail |
| C2H6g10031 | 6:1,099,759-1,104,110 | - | C1H6g20077 | CX6g044708 | LOC_Os06g04010 | Os06g0130600 | OsGBP1 | Detail |
| C2H6g17502 | 6:1,105,721-1,107,104 | - | C1H6g17787 | CX6g044104 | LOC_Os06g04020 | Os06g0130800 | - | Detail |
| C2H6g03952 | 6:1,108,573-1,109,466 | - | C1H6g00179 | CX6g042400 | LOC_Os06g04030 | Os06g0130900 | - | Detail |
| C2H6g02995 | 6:1,111,833-1,117,107 | + | C1H6g27483 | CX6g044062 | LOC_Os06g04040 | Os06g0131100 | - | Detail |
| C2H6g25218 | 6:1,134,720-1,136,828 | - | - | CX6g045583 | LOC_Os06g04070 | Os06g0131300 | ADC1, OsADC1, ARGDC, ADC, OsAdc1 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |