| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g23873 | 1:21,116,180-21,119,447 | + | C2H1g00437 | CX1g003177 | LOC_Os01g41730 | Os01g0601200 | - | Detail |
| C1H1g01172 | 1:21,122,355-21,124,808 | - | C2H1g26294 | CX1g002379 | LOC_Os01g41750 | Os01g0601625 | - | Detail |
| C1H1g08879 | 1:21,130,655-21,133,852 | - | C2H1g14013 | CX1g002379 | LOC_Os01g41750 | Os01g0601625 | - | Detail |
| C1H1g08927 | 1:21,181,522-21,182,026 | - | C2H1g29858 | - | - | - | - | Detail |
| C1H1g19788 | 1:21,193,404-21,203,540 | - | C2H1g16059 | CX1g000100 | LOC_Os01g41780 | Os01g0601700 | - | Detail |
| C1H1g30244 | 1:21,212,956-21,218,104 | - | C2H1g19450 | CX1g005051 | LOC_Os01g41810 | Os01g0602200 | CYP72A31 | Detail |
| C1H1g22213 | 1:21,259,955-21,262,679 | - | C2H1g05141 | CX1g005419 | LOC_Os01g41810 | Os01g0602400 | - | Detail |
| C1H1g22360 | 1:21,268,845-21,272,029 | - | C2H1g30376 | CX1g003299 | LOC_Os01g41820 | Os01g0602500 | - | Detail |
| C1H1g05853 | 1:21,274,895-21,278,768 | - | C2H1g19557 | CX1g000347 | LOC_Os01g41834 | Os01g0602600 | - | Detail |
| C1H1g10576 | 1:21,290,316-21,295,619 | - | C2H1g19557 | CX1g001572 | LOC_Os01g41834 | Os01g0602600 | - | Detail |
| C1H1g05516 | 1:21,325,660-21,330,980 | + | C2H1g15079 | CX1g005328 | LOC_Os01g41870 | Os01g0602800 | - | Detail |
| C1H1g22010 | 1:21,339,820-21,343,765 | - | C2H1g19193 | CX1g001319 | LOC_Os01g41880 | Os01g0603000 | - | Detail |
| C1H1g04738 | 1:21,346,112-21,346,732 | + | - | - | - | - | - | Detail |
| C1H1g14967 | 1:21,363,059-21,365,073 | + | C2H1g00117 | CX1g000319 | LOC_Os01g41900 | Os01g0603300 | - | Detail |
| C1H1g13998 | 1:21,380,776-21,383,694 | + | C2H1g00298 | CX1g006196 | LOC_Os01g41910 | Os01g0603500 | - | Detail |
| C1H1g06943 | 1:21,411,493-21,412,190 | - | C2H1g07120 | - | - | - | - | Detail |
| C1H1g02821 | 1:21,420,598-21,424,245 | - | C2H1g14362 | CX1g006048 | LOC_Os01g42010 | Os01g0604700 | - | Detail |
| C1H1g28348 | 1:21,435,857-21,437,497 | + | C2H1g02941 | CX1g006060 | LOC_Os01g42030 | Os01g0605100 | - | Detail |
| C1H1g14962 | 1:21,441,071-21,443,309 | + | C2H1g14724 | CX1g000014 | LOC_Os01g42040 | Os01g0605300 | - | Detail |
| C1H1g16958 | 1:21,443,769-21,447,002 | + | C2H1g28671 | CX1g000292 | LOC_Os01g42060 | Os01g0605400 | OsGEX3 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H10g01892 | 10:10,437,095-10,437,779 | - | C1H10g22659 | - | - | - | - | Detail |
| C2H10g28252 | 10:10,455,310-10,459,721 | + | C1H10g20546 | CX10g008168 | LOC_Os10g21460 | Os10g0358600 | - | Detail |
| C2H10g12273 | 10:10,461,766-10,464,428 | - | C1H10g14022 | CX10g010475 | LOC_Os10g21470 | Os10g0358700 | - | Detail |
| C2H10g29078 | 10:10,474,124-10,476,644 | - | C1H10g29945 | CX10g009930 | LOC_Os10g21490 | - | - | Detail |
| C2H10g02652 | 10:10,488,771-10,489,913 | + | C1H10g16528 | CX10g008439 | LOC_Os10g21540 | Os10g0359200 | - | Detail |
| C2H10g18902 | 10:10,498,404-10,501,797 | - | C1H10g18664 | CX10g009618 | LOC_Os10g21560 | Os10g0359500 | - | Detail |
| C2H10g05637 | 10:10,514,587-10,516,735 | - | C1H10g18874 | CX10g010522 | LOC_Os10g21590 | Os10g0360100 | - | Detail |
| C2H10g27251 | 10:10,521,535-10,522,304 | - | C1H10g17548 | - | - | - | - | Detail |
| C2H10g25817 | 10:10,529,597-10,529,976 | - | C1H10g10032 | - | - | - | - | Detail |
| C2H10g24961 | 10:10,536,850-10,540,537 | + | C1H10g30481 | CX10g007795 | LOC_Os10g21800 | Os10g0360800 | - | Detail |
| C2H10g25330 | 10:10,542,442-10,547,040 | + | - | - | - | - | - | Detail |
| C2H10g16627 | 10:10,543,097-10,546,184 | - | C1H10g19484 | CX10g010771 | LOC_Os10g21660 | - | - | Detail |
| C2H10g16136 | 10:10,557,714-10,558,349 | - | C1H5g20408 | - | - | - | - | Detail |
| C2H10g16733 | 10:10,563,595-10,563,995 | + | - | - | - | - | - | Detail |
| C2H10g30610 | 10:10,564,877-10,565,523 | + | - | - | - | - | - | Detail |
| C2H10g05328 | 10:10,572,798-10,573,292 | + | C1H10g15818 | CX10g007732 | LOC_Os10g21670 | Os10g0361000 | - | Detail |
| C2H10g20812 | 10:10,588,844-10,589,320 | + | C1H10g09092 | CX10g009951 | LOC_Os10g21670 | Os10g0361300 | - | Detail |
| C2H10g05563 | 10:10,600,692-10,601,414 | - | C1H10g28163 | CX10g007540 | - | - | - | Detail |
| C2H10g24548 | 10:10,604,322-10,604,825 | + | C1H10g27379 | CX10g008677 | LOC_Os10g21790 | Os10g0361900 | - | Detail |
| C2H10g01089 | 10:10,609,788-10,621,213 | - | C1H10g20202 | CX10g010859 | LOC_Os10g21810 | Os10g0362300 | HK5, OHK3b, OHK3, HK, OsHK5, Crl3, Ohk3, OsHK2 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |