| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g23873 | 1:21,116,180-21,119,447 | + | C2H1g00437 | CX1g003177 | LOC_Os01g41730 | Os01g0601200 | - | Detail |
| C1H1g01172 | 1:21,122,355-21,124,808 | - | C2H1g26294 | CX1g002379 | LOC_Os01g41750 | Os01g0601625 | - | Detail |
| C1H1g08879 | 1:21,130,655-21,133,852 | - | C2H1g14013 | CX1g002379 | LOC_Os01g41750 | Os01g0601625 | - | Detail |
| C1H1g08927 | 1:21,181,522-21,182,026 | - | C2H1g29858 | - | - | - | - | Detail |
| C1H1g19788 | 1:21,193,404-21,203,540 | - | C2H1g16059 | CX1g000100 | LOC_Os01g41780 | Os01g0601700 | - | Detail |
| C1H1g30244 | 1:21,212,956-21,218,104 | - | C2H1g19450 | CX1g005051 | LOC_Os01g41810 | Os01g0602200 | CYP72A31 | Detail |
| C1H1g22213 | 1:21,259,955-21,262,679 | - | C2H1g05141 | CX1g005419 | LOC_Os01g41810 | Os01g0602400 | - | Detail |
| C1H1g22360 | 1:21,268,845-21,272,029 | - | C2H1g30376 | CX1g003299 | LOC_Os01g41820 | Os01g0602500 | - | Detail |
| C1H1g05853 | 1:21,274,895-21,278,768 | - | C2H1g19557 | CX1g000347 | LOC_Os01g41834 | Os01g0602600 | - | Detail |
| C1H1g10576 | 1:21,290,316-21,295,619 | - | C2H1g19557 | CX1g001572 | LOC_Os01g41834 | Os01g0602600 | - | Detail |
| C1H1g05516 | 1:21,325,660-21,330,980 | + | C2H1g15079 | CX1g005328 | LOC_Os01g41870 | Os01g0602800 | - | Detail |
| C1H1g22010 | 1:21,339,820-21,343,765 | - | C2H1g19193 | CX1g001319 | LOC_Os01g41880 | Os01g0603000 | - | Detail |
| C1H1g04738 | 1:21,346,112-21,346,732 | + | - | - | - | - | - | Detail |
| C1H1g14967 | 1:21,363,059-21,365,073 | + | C2H1g00117 | CX1g000319 | LOC_Os01g41900 | Os01g0603300 | - | Detail |
| C1H1g13998 | 1:21,380,776-21,383,694 | + | C2H1g00298 | CX1g006196 | LOC_Os01g41910 | Os01g0603500 | - | Detail |
| C1H1g06943 | 1:21,411,493-21,412,190 | - | C2H1g07120 | - | - | - | - | Detail |
| C1H1g02821 | 1:21,420,598-21,424,245 | - | C2H1g14362 | CX1g006048 | LOC_Os01g42010 | Os01g0604700 | - | Detail |
| C1H1g28348 | 1:21,435,857-21,437,497 | + | C2H1g02941 | CX1g006060 | LOC_Os01g42030 | Os01g0605100 | - | Detail |
| C1H1g14962 | 1:21,441,071-21,443,309 | + | C2H1g14724 | CX1g000014 | LOC_Os01g42040 | Os01g0605300 | - | Detail |
| C1H1g16958 | 1:21,443,769-21,447,002 | + | C2H1g28671 | CX1g000292 | LOC_Os01g42060 | Os01g0605400 | OsGEX3 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g16936 | 6:26,305,257-26,309,460 | + | C1H6g07579 | CX6g044738 | LOC_Os06g49230 | Os06g0706400 | OsPTR9 | Detail |
| C2H6g07496 | 6:26,318,632-26,320,509 | - | C1H6g14791 | CX6g045701 | LOC_Os06g49300 | Os06g0707000 | XYXT1 | Detail |
| C2H6g02584 | 6:26,323,425-26,330,572 | + | C1H6g07781 | CX6g042851 | LOC_Os06g49310 | Os06g0707100 | - | Detail |
| C2H6g28355 | 6:26,330,394-26,332,385 | - | C1H6g30332 | CX6g044744 | LOC_Os06g49320 | Os06g0707200 | OsXAT4 | Detail |
| C2H6g09646 | 6:26,340,773-26,345,257 | - | C1H6g20503 | CX6g043432 | LOC_Os06g49360 | Os06g0707350 | - | Detail |
| C2H6g02972 | 6:26,358,873-26,363,396 | - | C1H6g28599 | CX6g043180 | LOC_Os06g49390 | Os06g0707733 | - | Detail |
| C2H6g12364 | 6:26,373,194-26,381,115 | - | C1H6g28599 | CX6g043432 | LOC_Os06g49420 | Os06g0707700 | - | Detail |
| C2H6g06456 | 6:26,381,954-26,383,389 | - | C1H6g18704 | - | - | - | - | Detail |
| C2H6g06263 | 6:26,385,335-26,390,272 | + | C1H6g17358 | CX6g042732 | LOC_Os06g49430 | Os06g0708000 | BWMK1, OsBWMK1M | Detail |
| C2H6g00786 | 6:26,391,339-26,397,254 | - | C1H6g07108 | CX6g043918 | LOC_Os06g49440 | Os06g0708100 | - | Detail |
| C2H6g22817 | 6:26,397,559-26,403,996 | + | C1H6g25506 | CX6g041443 | LOC_Os06g49450 | Os06g0708200 | OsMTOPVIB | Detail |
| C2H6g13876 | 6:26,404,653-26,406,561 | + | C1H6g16157 | CX6g042713 | LOC_Os06g49460 | Os06g0708300 | - | Detail |
| C2H6g01779 | 6:26,407,653-26,409,481 | + | C1H6g26774 | CX6g043935 | LOC_Os06g49470 | Os06g0708400 | CYP19-4, OsCYP19-4, OsCYP-16, OsCYP19-3 | Detail |
| C2H6g06908 | 6:26,410,614-26,413,172 | + | C1H6g04243 | CX6g042472 | LOC_Os06g49480 | Os06g0708500 | - | Detail |
| C2H6g01327 | 6:26,415,715-26,418,824 | - | C1H6g00335 | CX6g043514 | LOC_Os06g49500 | Os06g0708700 | - | Detail |
| C2H6g14145 | 6:26,425,696-26,431,947 | - | C1H6g23362 | CX6g044369 | LOC_Os06g49505 | Os06g0708832 | - | Detail |
| C2H6g21552 | 6:26,432,605-26,433,753 | + | C1H6g28139 | CX6g045386 | LOC_Os06g49520 | Os06g0709000 | - | Detail |
| C2H6g27299 | 6:26,434,434-26,437,295 | + | C1H6g23498 | CX6g043825 | LOC_Os06g49530 | Os06g0709100 | - | Detail |
| C2H6g19038 | 6:26,437,837-26,440,071 | - | C1H6g20666 | CX6g044020 | LOC_Os06g49550 | Os06g0597800 | - | Detail |
| C2H6g21852 | 6:26,450,253-26,451,402 | - | C1H6g12428 | CX6g041405 | LOC_Os06g49640 | Os06g0710300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |