| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g19784 | 4:27,335,340-27,336,862 | - | C2H4g04663 | CX4g035396 | LOC_Os04g52720 | Os04g0617900 | - | Detail |
| C1H4g16144 | 4:27,341,358-27,345,597 | + | C2H4g20761 | CX4g036359 | - | - | - | Detail |
| C1H4g21738 | 4:27,347,008-27,350,734 | + | C2H4g14147 | CX4g032842 | LOC_Os04g52730 | Os04g0618200 | - | Detail |
| C1H4g28262 | 4:27,354,171-27,354,467 | + | C2H4g20866 | CX4g034575 | LOC_Os04g52750 | Os04g0618400 | - | Detail |
| C1H4g01403 | 4:27,355,456-27,359,541 | - | C2H4g09538 | CX4g035558 | LOC_Os04g52760 | Os04g0618500 | - | Detail |
| C1H4g16234 | 4:27,361,688-27,362,774 | + | C2H4g06850 | CX4g034460 | LOC_Os04g52770 | Os04g0618600 | PIF1 | Detail |
| C1H4g28199 | 4:27,363,964-27,368,068 | - | C2H4g10397 | CX4g034704 | LOC_Os04g52780 | Os04g0618700 | OsFLS2 | Detail |
| C1H4g22303 | 4:27,382,282-27,385,360 | - | C2H4g00816 | CX4g036144 | LOC_Os04g52810 | Os04g0619000 | ONAC083 | Detail |
| C1H4g07288 | 4:27,389,779-27,391,289 | + | - | - | LOC_Os04g52820 | - | - | Detail |
| C1H4g06933 | 4:27,391,734-27,392,098 | + | C2H4g08987 | CX4g032452 | - | - | - | Detail |
| C1H4g18636 | 4:27,400,694-27,403,858 | + | C2H4g28780 | CX4g031427 | LOC_Os04g52830 | Os04g0619300 | Ctb1 | Detail |
| C1H4g13931 | 4:27,404,926-27,408,291 | - | C2H4g02197 | CX4g035196 | LOC_Os04g52840 | Os04g0619400 | OsRLCK160 | Detail |
| C1H4g15202 | 4:27,414,637-27,417,536 | + | C2H4g23444 | CX4g033062 | LOC_Os04g52850 | Os04g0619500 | - | Detail |
| C1H4g24641 | 4:27,419,171-27,421,705 | - | C2H4g18841 | CX4g033748 | LOC_Os04g52860 | Os04g0619600 | - | Detail |
| C1H4g04907 | 4:27,425,704-27,428,943 | - | C2H4g25907 | - | - | - | - | Detail |
| C1H4g18235 | 4:27,441,312-27,446,700 | + | C2H4g06612 | CX4g036286 | LOC_Os04g52890 | Os04g0619900 | - | Detail |
| C1H4g18046 | 4:27,447,425-27,459,871 | - | C2H4g03746 | CX4g032062 | LOC_Os04g52900 | Os04g0620000 | MRP1, OsABCC1, OsABCC1-1, OsABCC1-2, OsMRP1 | Detail |
| C1H4g10267 | 4:27,463,348-27,464,456 | - | - | - | - | - | - | Detail |
| C1H4g11396 | 4:27,467,836-27,470,683 | + | C2H4g02835 | CX4g031475 | LOC_Os04g52920 | Os04g0620200 | GSD1, OsREM6.6, REM6.6 | Detail |
| C1H4g16306 | 4:27,471,210-27,471,907 | - | - | - | LOC_Os04g52930 | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H7g17410 | 7:15,107,775-15,109,061 | + | C1H7g04210 | CX7g047929 | LOC_Os07g31390 | Os07g0496250 | - | Detail |
| C2H7g03817 | 7:15,109,351-15,113,108 | - | C1H7g27897 | CX7g047317 | LOC_Os07g31400 | Os07g0496300 | - | Detail |
| C2H7g24319 | 7:15,120,278-15,124,255 | + | C1H7g00750 | CX7g049841 | LOC_Os07g31420 | Os07g0496600 | - | Detail |
| C2H7g12800 | 7:15,130,577-15,133,538 | + | C1H7g10037 | CX7g046921 | LOC_Os07g31440 | Os07g0496900 | - | Detail |
| C2H7g15940 | 7:15,134,201-15,148,150 | - | C1H7g08856 | CX7g046829 | LOC_Os07g31450 | Os07g0497100 | CHR729, OsCHR4, CRL6 | Detail |
| C2H7g17030 | 7:15,151,707-15,162,300 | + | C1H7g24819 | CX7g048155 | LOC_Os07g31460 | Os07g0497400 | - | Detail |
| C2H7g30562 | 7:15,167,732-15,169,322 | - | C1H7g17998 | CX7g050276 | LOC_Os07g31470 | Os07g0497500 | Os2R_MYB70 | Detail |
| C2H7g19743 | 7:15,186,096-15,188,661 | + | C1H7g28833 | CX7g047097 | - | - | - | Detail |
| C2H7g10197 | 7:15,189,481-15,192,637 | + | C1H7g14980 | CX7g046801 | LOC_Os07g31490 | Os07g0498300 | - | Detail |
| C2H7g02570 | 7:15,193,192-15,197,724 | - | C1H7g05056 | CX7g049216 | LOC_Os07g31500 | Os07g0498400 | OsSGN3a | Detail |
| C2H7g27288 | 7:15,223,802-15,232,431 | - | C1H7g25232 | CX7g048518 | LOC_Os07g31540 | Os07g0498800 | CRTintP, CRTintP1 | Detail |
| C2H7g28595 | 7:15,236,151-15,242,245 | + | C1H7g18176 | CX7g047522 | LOC_Os07g31550 | Os07g0498900 | - | Detail |
| C2H7g01079 | 7:15,248,208-15,249,666 | + | C1H7g28927 | - | - | - | - | Detail |
| C2H7g23185 | 7:15,257,859-15,258,454 | + | C1H7g30077 | CX7g047129 | LOC_Os07g31610 | Os07g0499500 | PRX102 | Detail |
| C2H7g29980 | 7:15,261,237-15,261,552 | + | - | - | - | - | - | Detail |
| C2H7g18061 | 7:15,278,592-15,283,555 | + | C1H7g24610 | CX7g048431 | LOC_Os07g31650 | Os07g0499800 | - | Detail |
| C2H7g10018 | 7:15,307,966-15,309,968 | + | C1H7g28536 | CX7g050385 | LOC_Os07g31720 | Os07g0500300 | OsGAP | Detail |
| C2H7g28942 | 7:15,320,872-15,324,199 | - | C1H7g03353 | CX7g049869 | LOC_Os07g31750 | Os07g0500800 | - | Detail |
| C2H7g11246 | 7:15,324,867-15,325,837 | - | C1H7g08282 | CX7g049869 | LOC_Os07g31750 | Os07g0501100 | OsCHS12 | Detail |
| C2H7g19996 | 7:15,334,754-15,336,386 | - | C1H7g02021 | CX7g050219 | LOC_Os07g31770 | Os07g0501100 | OsCHS12 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |