| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g15848 | 4:27,158,459-27,163,047 | + | C2H4g15420 | CX4g034962 | LOC_Os04g52540 | Os04g0615700 | OsAGO2 | Detail |
| C1H4g23171 | 4:27,164,139-27,169,123 | + | C2H4g00576 | CX4g031812 | LOC_Os04g52550 | Os04g0615800 | - | Detail |
| C1H4g27864 | 4:27,169,421-27,173,804 | - | C2H4g30305 | CX4g035991 | LOC_Os04g52560 | Os04g0615900 | - | Detail |
| C1H4g17112 | 4:27,175,105-27,177,508 | - | C2H4g08342 | CX4g032086 | LOC_Os04g52570 | Os04g0616000 | - | Detail |
| C1H4g26505 | 4:27,179,338-27,181,369 | - | C2H4g00410 | CX4g034073 | LOC_Os04g52580 | Os04g0616100 | - | Detail |
| C1H4g26370 | 4:27,182,695-27,184,868 | - | C2H4g07040 | CX4g035196 | LOC_Os04g52590 | Os04g0616200 | - | Detail |
| C1H4g21072 | 4:27,189,513-27,190,146 | - | C2H4g12282 | - | LOC_Os04g52590 | Os04g0616200 | - | Detail |
| C1H4g31488 | 4:27,192,850-27,201,167 | - | C2H4g22401 | CX4g035196 | LOC_Os04g52600 | Os04g0616300 | - | Detail |
| C1H4g29940 | 4:27,202,864-27,215,899 | - | C2H4g26176 | CX4g035196 | LOC_Os04g52600 | Os04g0616500 | - | Detail |
| C1H4g23482 | 4:27,215,988-27,219,096 | - | C2H4g26176 | - | LOC_Os04g52614 | Os04g0616400 | - | Detail |
| C1H4g10791 | 4:27,223,436-27,231,152 | - | C2H4g28668 | CX4g035196 | LOC_Os04g52630 | Os04g0616600 | - | Detail |
| C1H4g16122 | 4:27,232,733-27,243,770 | - | C2H4g22401 | CX4g035196 | LOC_Os04g52640 | Os04g0616600 | - | Detail |
| C1H4g24234 | 4:27,243,814-27,251,346 | - | C2H4g09870 | - | LOC_Os04g52630 | Os04g0616700 | - | Detail |
| C1H4g02426 | 4:27,255,578-27,256,798 | + | - | - | LOC_Os04g43810 | - | - | Detail |
| C1H4g02647 | 4:27,259,974-27,262,783 | - | C2H4g22401 | CX4g035196 | LOC_Os04g52600 | Os04g0616300 | - | Detail |
| C1H4g02369 | 4:27,273,428-27,277,497 | - | C2H4g12282 | CX4g035971 | LOC_Os04g52630 | Os04g0616700 | - | Detail |
| C1H4g28831 | 4:27,283,981-27,285,847 | + | C2H4g04032 | - | LOC_Os04g52650 | Os04g0616800 | - | Detail |
| C1H4g27365 | 4:27,305,710-27,311,051 | - | C2H4g01536 | CX4g036466 | LOC_Os04g52690 | Os04g0617600 | - | Detail |
| C1H4g15358 | 4:27,321,635-27,322,707 | - | C2H4g04231 | CX4g034356 | LOC_Os04g52700 | Os04g0617700 | - | Detail |
| C1H4g09661 | 4:27,331,354-27,335,112 | + | C2H4g26522 | CX4g031958 | LOC_Os04g52710 | Os04g0617800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g07822 | 2:8,091,959-8,098,255 | + | C1H2g13076 | CX2g021622 | LOC_Os02g15594 | Os02g0255100 | - | Detail |
| C2H2g05025 | 2:8,099,612-8,101,858 | - | C1H2g14262 | CX2g019828 | LOC_Os02g15610 | Os02g0255200 | - | Detail |
| C2H2g18123 | 2:8,111,519-8,116,922 | + | C1H2g16909 | CX2g024140 | LOC_Os02g15620 | Os02g0255300 | - | Detail |
| C2H2g13840 | 2:8,142,232-8,145,813 | + | C1H2g10890 | CX2g024336 | LOC_Os02g15640 | Os02g0255500 | OsPYL10, OsPYL/RCAR3, OsPYL3, OsRCAR1 | Detail |
| C2H2g21607 | 2:8,155,354-8,166,136 | - | C1H2g12749 | CX2g023660 | LOC_Os02g15660 | Os02g0255700 | - | Detail |
| C2H2g01477 | 2:8,177,845-8,178,419 | + | C1H2g23974 | CX2g022146 | LOC_Os02g15690 | Os02g0256100 | - | Detail |
| C2H2g11923 | 2:8,179,258-8,180,463 | + | C1H2g06443 | CX2g022146 | LOC_Os02g15690 | Os02g0256100 | - | Detail |
| C2H2g12367 | 2:8,184,104-8,185,117 | - | C1H2g03270 | CX2g020997 | LOC_Os02g15700 | Os02g0256200 | OsHARP | Detail |
| C2H2g10056 | 2:8,192,193-8,192,987 | - | C1H2g23606 | CX2g019952 | LOC_Os02g15710 | Os02g0256800 | - | Detail |
| C2H2g17559 | 2:8,222,655-8,223,338 | - | C1H2g20379 | CX2g023968 | LOC_Os02g15730 | Os02g0257100 | - | Detail |
| C2H2g28950 | 2:8,225,149-8,227,476 | - | C1H2g24379 | CX2g021668 | LOC_Os02g15740 | Os02g0257200 | - | Detail |
| C2H2g25189 | 2:8,229,088-8,232,879 | + | C1H2g05055 | CX2g019120 | LOC_Os02g15750 | Os02g0257300 | OsTROL1 | Detail |
| C2H2g08854 | 2:8,236,650-8,239,816 | - | C1H2g17879 | CX2g020140 | LOC_Os02g15760 | Os02g0257500 | OsSPCH2 | Detail |
| C2H2g26210 | 2:8,290,875-8,292,580 | - | C1H2g08552 | CX2g020807 | LOC_Os02g15810 | Os02g0258200 | - | Detail |
| C2H2g14268 | 2:8,295,376-8,301,064 | - | C1H2g01345 | CX2g021130 | LOC_Os02g15820 | Os02g0258300 | - | Detail |
| C2H2g28678 | 2:8,323,070-8,323,345 | + | C1H2g29798 | CX2g024305 | LOC_Os02g15860 | Os02g0258800 | - | Detail |
| C2H2g14628 | 2:8,326,149-8,329,629 | - | C1H2g20084 | CX2g022221 | LOC_Os02g15870 | Os02g0258900 | - | Detail |
| C2H2g14089 | 2:8,354,561-8,356,716 | - | C1H2g15544 | CX2g024280 | LOC_Os02g15900 | Os02g0259600 | - | Detail |
| C2H2g22829 | 2:8,364,811-8,372,618 | + | C1H2g04256 | CX2g024539 | LOC_Os02g15930 | Os02g0259850 | - | Detail |
| C2H2g09217 | 2:8,388,593-8,389,819 | + | C1H2g03338 | CX2g022291 | LOC_Os02g15950 | Os02g0260200 | EP3, LP | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |