| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g15848 | 4:27,158,459-27,163,047 | + | C2H4g15420 | CX4g034962 | LOC_Os04g52540 | Os04g0615700 | OsAGO2 | Detail |
| C1H4g23171 | 4:27,164,139-27,169,123 | + | C2H4g00576 | CX4g031812 | LOC_Os04g52550 | Os04g0615800 | - | Detail |
| C1H4g27864 | 4:27,169,421-27,173,804 | - | C2H4g30305 | CX4g035991 | LOC_Os04g52560 | Os04g0615900 | - | Detail |
| C1H4g17112 | 4:27,175,105-27,177,508 | - | C2H4g08342 | CX4g032086 | LOC_Os04g52570 | Os04g0616000 | - | Detail |
| C1H4g26505 | 4:27,179,338-27,181,369 | - | C2H4g00410 | CX4g034073 | LOC_Os04g52580 | Os04g0616100 | - | Detail |
| C1H4g26370 | 4:27,182,695-27,184,868 | - | C2H4g07040 | CX4g035196 | LOC_Os04g52590 | Os04g0616200 | - | Detail |
| C1H4g21072 | 4:27,189,513-27,190,146 | - | C2H4g12282 | - | LOC_Os04g52590 | Os04g0616200 | - | Detail |
| C1H4g31488 | 4:27,192,850-27,201,167 | - | C2H4g22401 | CX4g035196 | LOC_Os04g52600 | Os04g0616300 | - | Detail |
| C1H4g29940 | 4:27,202,864-27,215,899 | - | C2H4g26176 | CX4g035196 | LOC_Os04g52600 | Os04g0616500 | - | Detail |
| C1H4g23482 | 4:27,215,988-27,219,096 | - | C2H4g26176 | - | LOC_Os04g52614 | Os04g0616400 | - | Detail |
| C1H4g10791 | 4:27,223,436-27,231,152 | - | C2H4g28668 | CX4g035196 | LOC_Os04g52630 | Os04g0616600 | - | Detail |
| C1H4g16122 | 4:27,232,733-27,243,770 | - | C2H4g22401 | CX4g035196 | LOC_Os04g52640 | Os04g0616600 | - | Detail |
| C1H4g24234 | 4:27,243,814-27,251,346 | - | C2H4g09870 | - | LOC_Os04g52630 | Os04g0616700 | - | Detail |
| C1H4g02426 | 4:27,255,578-27,256,798 | + | - | - | LOC_Os04g43810 | - | - | Detail |
| C1H4g02647 | 4:27,259,974-27,262,783 | - | C2H4g22401 | CX4g035196 | LOC_Os04g52600 | Os04g0616300 | - | Detail |
| C1H4g02369 | 4:27,273,428-27,277,497 | - | C2H4g12282 | CX4g035971 | LOC_Os04g52630 | Os04g0616700 | - | Detail |
| C1H4g28831 | 4:27,283,981-27,285,847 | + | C2H4g04032 | - | LOC_Os04g52650 | Os04g0616800 | - | Detail |
| C1H4g27365 | 4:27,305,710-27,311,051 | - | C2H4g01536 | CX4g036466 | LOC_Os04g52690 | Os04g0617600 | - | Detail |
| C1H4g15358 | 4:27,321,635-27,322,707 | - | C2H4g04231 | CX4g034356 | LOC_Os04g52700 | Os04g0617700 | - | Detail |
| C1H4g09661 | 4:27,331,354-27,335,112 | + | C2H4g26522 | CX4g031958 | LOC_Os04g52710 | Os04g0617800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H12g20148 | 12:2,346,213-2,347,171 | - | C1H12g08468 | CX12g017701 | LOC_Os12g05590 | Os12g0152000 | Oscen1, FDR1, RCN3, Oscen1/ FDR1 | Detail |
| C2H12g12457 | 12:2,353,108-2,354,902 | + | C1H12g07729 | CX12g018389 | LOC_Os12g05600 | Os12g0152100 | - | Detail |
| C2H12g13362 | 12:2,370,479-2,371,492 | + | C1H12g30150 | CX12g018389 | LOC_Os12g05630 | Os12g0152500 | - | Detail |
| C2H12g01708 | 12:2,374,830-2,376,992 | - | C1H12g00663 | CX12g017206 | LOC_Os12g05640 | Os12g0152600 | - | Detail |
| C2H12g04327 | 12:2,377,972-2,382,548 | - | C1H12g14242 | CX12g016024 | LOC_Os12g05650 | Os12g0152700 | - | Detail |
| C2H12g22774 | 12:2,389,532-2,394,305 | + | C1H12g29017 | CX12g017584 | LOC_Os12g05660 | Os12g0152800 | - | Detail |
| C2H12g08928 | 12:2,392,365-2,399,334 | - | C1H12g28763 | CX12g016609 | LOC_Os12g05680 | Os12g0152900 | OsbZIP83, TGAL11 | Detail |
| C2H12g05776 | 12:2,433,938-2,434,860 | + | C1H12g29526 | CX12g016099 | LOC_Os12g05730 | Os12g0153500 | - | Detail |
| C2H12g00041 | 12:2,437,797-2,440,161 | + | C1H12g08598 | CX12g015296 | LOC_Os12g05740 | Os12g0153600 | - | Detail |
| C2H12g09749 | 12:2,454,474-2,458,147 | - | C1H12g02157 | CX12g017479 | LOC_Os12g05780 | Os12g0154600 | - | Detail |
| C2H12g04677 | 12:2,461,576-2,464,256 | + | C1H12g30827 | CX12g017672 | LOC_Os12g05810 | Os12g0154400 | - | Detail |
| C2H12g18141 | 12:2,466,115-2,469,408 | + | C1H12g29174 | CX12g018561 | LOC_Os12g05830 | Os12g0154600 | - | Detail |
| C2H12g12501 | 12:2,470,530-2,471,338 | - | C1H12g23452 | CX12g018459 | LOC_Os12g05860 | Os12g0154800 | GLP12-2, OsGLP12-2 | Detail |
| C2H12g27455 | 12:2,474,199-2,476,949 | - | C1H12g24006 | CX12g017127 | LOC_Os12g05860 | Os12g0154800 | GLP12-2, OsGLP12-2 | Detail |
| C2H12g23733 | 12:2,477,950-2,478,757 | - | C1H12g18669 | CX12g015507 | LOC_Os12g05870 | Os12g0154900 | GLP12-3, GLP12-1, OsGLP12-3 | Detail |
| C2H12g06783 | 12:2,480,983-2,481,783 | - | C1H12g28017 | CX12g017127 | LOC_Os12g05860 | Os12g0154800 | GLP12-2, OsGLP12-2 | Detail |
| C2H12g30495 | 12:2,488,547-2,489,374 | - | C1H12g20880 | CX11g013134 | LOC_Os12g05890 | Os12g0155100 | - | Detail |
| C2H12g28920 | 12:2,491,389-2,496,848 | - | C1H12g14419 | CX12g015199 | LOC_Os12g05900 | Os12g0155200 | - | Detail |
| C2H12g08033 | 12:2,506,455-2,513,021 | + | C1H12g09556 | CX12g016405 | LOC_Os12g05920 | Os12g0155300 | - | Detail |
| C2H12g30008 | 12:2,541,475-2,544,415 | + | C1H12g13408 | - | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |