| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g25868 | 4:27,028,064-27,031,267 | + | C2H4g14538 | CX4g032554 | LOC_Os04g52320 | Os04g0613200 | - | Detail |
| C1H4g13224 | 4:27,033,552-27,036,319 | - | C2H4g16426 | CX4g033530 | LOC_Os04g52330 | Os04g0613300 | - | Detail |
| C1H4g01801 | 4:27,037,337-27,041,771 | - | C2H4g12813 | CX4g033988 | LOC_Os04g52340 | Os04g0613400 | - | Detail |
| C1H4g11906 | 4:27,042,573-27,044,494 | + | C2H4g02435 | CX4g031886 | LOC_Os04g52361 | Os04g0613500 | - | Detail |
| C1H4g23783 | 4:27,045,459-27,047,091 | + | C2H4g02435 | CX4g035778 | LOC_Os04g52361 | Os04g0613600 | - | Detail |
| C1H4g03528 | 4:27,048,147-27,052,611 | - | C2H4g14262 | CX4g033920 | LOC_Os04g52370 | Os04g0613700 | UAP2 | Detail |
| C1H4g12683 | 4:27,058,517-27,064,454 | - | C2H4g30596 | CX4g033615 | LOC_Os04g52380 | Os04g0613800 | - | Detail |
| C1H4g15444 | 4:27,067,771-27,072,901 | - | C2H4g10814 | CX4g032046 | LOC_Os04g52390 | Os04g0613900 | - | Detail |
| C1H4g09621 | 4:27,078,784-27,081,225 | + | C2H4g02940 | CX4g033364 | LOC_Os04g52400 | Os04g0614000 | - | Detail |
| C1H4g18002 | 4:27,082,871-27,084,273 | + | C2H4g14823 | CX4g033138 | LOC_Os04g52410 | Os04g0614100 | - | Detail |
| C1H4g00068 | 4:27,086,714-27,090,608 | + | C2H4g28997 | CX4g031526 | LOC_Os04g52420 | Os04g0616900 | - | Detail |
| C1H4g05036 | 4:27,094,625-27,096,302 | + | C2H4g06699 | CX4g031526 | LOC_Os04g52660 | Os04g0614300 | - | Detail |
| C1H4g02712 | 4:27,100,763-27,106,548 | + | C2H4g17218 | CX4g035904 | LOC_Os04g52450 | Os04g0614600 | - | Detail |
| C1H4g17515 | 4:27,111,400-27,120,369 | + | C2H4g10708 | CX4g035957 | LOC_Os04g52460 | Os04g0614700 | - | Detail |
| C1H4g07167 | 4:27,132,062-27,132,244 | + | - | - | - | - | - | Detail |
| C1H4g20369 | 4:27,132,485-27,137,405 | + | C2H4g23243 | CX4g036351 | LOC_Os04g52479 | Os04g0615000 | NAL1, nal1, cul1, GPS, SPIKE, SPIKE/LSCHL4/NAL1/GPS, SPIKE/NAL1, LSCHL4 | Detail |
| C1H4g29702 | 4:27,138,169-27,142,624 | + | C2H4g24013 | CX4g034949 | LOC_Os04g52500 | Os04g0615100 | - | Detail |
| C1H4g06180 | 4:27,143,216-27,143,900 | - | C2H4g04550 | - | LOC_Os04g52504 | Os04g0615200 | - | Detail |
| C1H4g16195 | 4:27,146,332-27,149,911 | + | C2H4g11553 | CX4g031653 | LOC_Os04g52520 | Os04g0615500 | - | Detail |
| C1H4g22078 | 4:27,150,667-27,151,792 | + | C2H4g12331 | CX4g031949 | LOC_Os04g52530 | Os04g0615600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g25357 | 5:14,401,041-14,404,505 | + | C1H5g03254 | CX5g040980 | LOC_Os05g29790 | Os05g0361500 | - | Detail |
| C2H5g09274 | 5:14,412,429-14,413,270 | + | C1H5g12777 | CX5g038564 | LOC_Os05g29810 | Os05g0361700 | - | Detail |
| C2H5g20265 | 5:14,429,197-14,433,186 | - | C1H5g03219 | CX5g039336 | LOC_Os05g29860 | Os05g0361900 | - | Detail |
| C2H5g22364 | 5:14,444,702-14,452,055 | + | C1H5g04926 | CX5g041061 | LOC_Os05g29880 | Os05g0362100 | - | Detail |
| C2H5g03493 | 5:14,455,069-14,459,699 | - | C1H3g23272 | CX5g037750 | - | - | - | Detail |
| C2H5g18229 | 5:14,474,486-14,475,261 | - | C1H5g07799 | CX5g039620 | LOC_Os05g29930 | Os05g0362600 | - | Detail |
| C2H5g03181 | 5:14,487,324-14,487,806 | + | C1H5g17400 | CX5g038225 | - | Os05g0120200 | - | Detail |
| C2H5g11320 | 5:14,491,927-14,493,477 | + | C1H5g12419 | CX5g039330 | LOC_Os05g29974 | Os05g0363100 | - | Detail |
| C2H5g08574 | 5:14,496,491-14,498,336 | + | C1H5g29412 | CX5g039330 | LOC_Os05g29974 | Os05g0363100 | - | Detail |
| C2H5g00252 | 5:14,498,422-14,502,578 | - | C1H5g15955 | CX5g040639 | LOC_Os05g29990 | Os05g0363200 | OsUXS5 | Detail |
| C2H5g08499 | 5:14,517,925-14,525,322 | - | C1H5g25034 | CX5g040379 | LOC_Os05g30010 | Os05g0363500 | - | Detail |
| C2H5g14151 | 5:14,539,292-14,539,692 | - | C1H5g26689 | CX5g038648 | LOC_Os05g30030 | Os05g0363600 | - | Detail |
| C2H5g11223 | 5:14,567,925-14,570,911 | - | C1H5g31895 | CX5g038831 | LOC_Os05g30130 | Os05g0364500 | - | Detail |
| C2H5g10985 | 5:14,586,010-14,592,111 | + | C1H5g05062 | CX5g039200 | LOC_Os05g30140 | Os05g0364600 | OsSR34 | Detail |
| C2H5g24216 | 5:14,594,913-14,595,846 | - | C1H5g13319 | CX5g040302 | LOC_Os05g30160 | - | - | Detail |
| C2H5g23177 | 5:14,617,821-14,620,927 | + | C1H5g22158 | CX5g038457 | LOC_Os05g30210 | Os05g0365200 | - | Detail |
| C2H5g10476 | 5:14,642,790-14,646,644 | - | C1H5g22274 | CX5g038613 | LOC_Os05g30220 | Os05g0365300 | - | Detail |
| C2H5g18448 | 5:14,659,744-14,664,291 | - | C1H5g14452 | CX5g038142 | LOC_Os05g30220 | Os05g0365300 | - | Detail |
| C2H5g26348 | 5:14,667,766-14,670,498 | + | C1H5g23340 | CX5g040490 | LOC_Os05g30240 | Os05g0365500 | - | Detail |
| C2H5g02016 | 5:14,675,790-14,679,650 | + | C1H5g05965 | - | LOC_Os05g30250 | Os05g0365600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |