| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g25868 | 4:27,028,064-27,031,267 | + | C2H4g14538 | CX4g032554 | LOC_Os04g52320 | Os04g0613200 | - | Detail |
| C1H4g13224 | 4:27,033,552-27,036,319 | - | C2H4g16426 | CX4g033530 | LOC_Os04g52330 | Os04g0613300 | - | Detail |
| C1H4g01801 | 4:27,037,337-27,041,771 | - | C2H4g12813 | CX4g033988 | LOC_Os04g52340 | Os04g0613400 | - | Detail |
| C1H4g11906 | 4:27,042,573-27,044,494 | + | C2H4g02435 | CX4g031886 | LOC_Os04g52361 | Os04g0613500 | - | Detail |
| C1H4g23783 | 4:27,045,459-27,047,091 | + | C2H4g02435 | CX4g035778 | LOC_Os04g52361 | Os04g0613600 | - | Detail |
| C1H4g03528 | 4:27,048,147-27,052,611 | - | C2H4g14262 | CX4g033920 | LOC_Os04g52370 | Os04g0613700 | UAP2 | Detail |
| C1H4g12683 | 4:27,058,517-27,064,454 | - | C2H4g30596 | CX4g033615 | LOC_Os04g52380 | Os04g0613800 | - | Detail |
| C1H4g15444 | 4:27,067,771-27,072,901 | - | C2H4g10814 | CX4g032046 | LOC_Os04g52390 | Os04g0613900 | - | Detail |
| C1H4g09621 | 4:27,078,784-27,081,225 | + | C2H4g02940 | CX4g033364 | LOC_Os04g52400 | Os04g0614000 | - | Detail |
| C1H4g18002 | 4:27,082,871-27,084,273 | + | C2H4g14823 | CX4g033138 | LOC_Os04g52410 | Os04g0614100 | - | Detail |
| C1H4g00068 | 4:27,086,714-27,090,608 | + | C2H4g28997 | CX4g031526 | LOC_Os04g52420 | Os04g0616900 | - | Detail |
| C1H4g05036 | 4:27,094,625-27,096,302 | + | C2H4g06699 | CX4g031526 | LOC_Os04g52660 | Os04g0614300 | - | Detail |
| C1H4g02712 | 4:27,100,763-27,106,548 | + | C2H4g17218 | CX4g035904 | LOC_Os04g52450 | Os04g0614600 | - | Detail |
| C1H4g17515 | 4:27,111,400-27,120,369 | + | C2H4g10708 | CX4g035957 | LOC_Os04g52460 | Os04g0614700 | - | Detail |
| C1H4g07167 | 4:27,132,062-27,132,244 | + | - | - | - | - | - | Detail |
| C1H4g20369 | 4:27,132,485-27,137,405 | + | C2H4g23243 | CX4g036351 | LOC_Os04g52479 | Os04g0615000 | NAL1, nal1, cul1, GPS, SPIKE, SPIKE/LSCHL4/NAL1/GPS, SPIKE/NAL1, LSCHL4 | Detail |
| C1H4g29702 | 4:27,138,169-27,142,624 | + | C2H4g24013 | CX4g034949 | LOC_Os04g52500 | Os04g0615100 | - | Detail |
| C1H4g06180 | 4:27,143,216-27,143,900 | - | C2H4g04550 | - | LOC_Os04g52504 | Os04g0615200 | - | Detail |
| C1H4g16195 | 4:27,146,332-27,149,911 | + | C2H4g11553 | CX4g031653 | LOC_Os04g52520 | Os04g0615500 | - | Detail |
| C1H4g22078 | 4:27,150,667-27,151,792 | + | C2H4g12331 | CX4g031949 | LOC_Os04g52530 | Os04g0615600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H8g28496 | 8:17,534,652-17,547,555 | + | C1H8g14706 | CX8g050823 | LOC_Os08g33076 | Os08g0427300 | - | Detail |
| C2H8g24900 | 8:17,548,124-17,551,328 | - | C1H8g11089 | CX8g053354 | LOC_Os08g33090 | Os08g0427600 | - | Detail |
| C2H8g16122 | 8:17,555,121-17,555,745 | + | C1H8g30701 | CX8g051559 | LOC_Os08g33100 | Os08g0427700 | - | Detail |
| C2H8g11913 | 8:17,560,140-17,560,394 | + | C1H8g13247 | CX8g052058 | LOC_Os08g33110 | Os08g0427800 | - | Detail |
| C2H8g12478 | 8:17,561,217-17,565,503 | - | C1H8g15468 | - | LOC_Os08g33120 | Os08g0427900 | - | Detail |
| C2H8g18856 | 8:17,574,651-17,578,714 | + | C1H8g07446 | - | LOC_Os08g33140 | Os08g0428100 | - | Detail |
| C2H8g08349 | 8:17,580,770-17,581,650 | + | C1H8g23894 | - | - | - | - | Detail |
| C2H8g02586 | 8:17,586,761-17,588,041 | + | C1H8g04533 | CX8g053117 | LOC_Os08g33150 | Os08g0428200 | Os2R_MYB76 | Detail |
| C2H8g25071 | 8:17,605,173-17,605,648 | - | C1H8g11968 | CX8g052726 | - | - | - | Detail |
| C2H8g17814 | 8:17,612,051-17,615,172 | - | C1H8g31336 | CX8g050680 | LOC_Os08g33160 | Os08g0428400 | - | Detail |
| C2H8g14531 | 8:17,644,268-17,644,882 | - | C1H8g29834 | CX8g054459 | LOC_Os08g33190 | Os08g0428800 | - | Detail |
| C2H8g22179 | 8:17,663,716-17,670,626 | - | C1H8g16602 | CX8g050807 | LOC_Os08g33200 | Os08g0428900 | - | Detail |
| C2H8g04273 | 8:17,695,913-17,700,108 | - | C1H8g21407 | CX8g052555 | LOC_Os08g33210 | - | - | Detail |
| C2H8g18997 | 8:17,734,806-17,737,546 | - | C1H8g10050 | CX8g053482 | LOC_Os08g33300 | Os08g0429800 | CYP735A3 | Detail |
| C2H8g00636 | 8:17,744,728-17,751,088 | - | C1H8g00422 | CX8g051393 | LOC_Os08g33320 | Os08g0430000 | - | Detail |
| C2H8g11628 | 8:17,760,236-17,761,197 | + | C1H8g30225 | CX8g051361 | LOC_Os08g33330 | Os08g0430100 | - | Detail |
| C2H8g05550 | 8:17,764,469-17,769,142 | + | C1H8g24772 | CX8g051217 | LOC_Os08g33340 | Os08g0430200 | - | Detail |
| C2H8g17605 | 8:17,769,934-17,770,206 | - | - | CX8g053045 | - | Os08g0486933 | - | Detail |
| C2H8g23742 | 8:17,771,883-17,774,641 | - | C1H8g17425 | - | LOC_Os08g33350 | Os08g0430300 | - | Detail |
| C2H8g13447 | 8:17,786,221-17,789,219 | - | C1H8g11194 | CX8g051246 | LOC_Os08g33370 | Os08g0430500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |