| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g09586 | 4:26,893,759-26,894,720 | + | C2H4g15134 | CX4g031847 | LOC_Os04g52110 | Os04g0610600 | - | Detail |
| C1H4g14376 | 4:26,895,285-26,899,907 | - | C2H4g09334 | CX4g033504 | LOC_Os04g52120 | Os04g0610700 | - | Detail |
| C1H4g14177 | 4:26,902,135-26,905,880 | + | C2H4g09691 | CX4g033376 | LOC_Os04g52130 | Os04g0610800 | RLIN1, LLM1 | Detail |
| C1H4g09163 | 4:26,914,001-26,919,215 | + | C2H4g11372 | CX4g036098 | LOC_Os04g52140 | Os04g0610900 | - | Detail |
| C1H4g23425 | 4:26,920,411-26,920,769 | - | C2H4g01714 | - | - | - | - | Detail |
| C1H4g04249 | 4:26,929,103-26,932,737 | + | C2H4g26244 | CX4g036457 | LOC_Os04g52164 | Os04g0611200 | OsCER2, CER2 | Detail |
| C1H4g10872 | 4:26,933,463-26,935,705 | + | C2H4g08391 | CX4g036475 | LOC_Os04g52180 | Os04g0611300 | - | Detail |
| C1H4g27242 | 4:26,936,755-26,940,405 | + | C2H4g02094 | CX4g034440 | LOC_Os04g52190 | Os04g0611400 | OsVSR7 | Detail |
| C1H4g09397 | 4:26,940,306-26,946,696 | - | C2H4g06949 | CX4g034242 | LOC_Os04g52200 | Os04g0611500 | - | Detail |
| C1H4g04516 | 4:26,954,495-26,961,853 | + | C2H4g15117 | CX4g033691 | LOC_Os04g52210 | Os04g0611700 | OsTPS39, OsKSL4 | Detail |
| C1H4g02714 | 4:26,963,534-26,966,409 | - | - | - | - | - | - | Detail |
| C1H4g09771 | 4:26,967,143-26,972,095 | + | C2H4g00671 | CX4g033691 | LOC_Os04g52230 | Os04g0611800 | OsKSL2 | Detail |
| C1H4g22925 | 4:26,976,309-26,982,128 | + | C2H4g15117 | CX4g032176 | LOC_Os04g52240 | Os04g0612000 | KS2, OsKS2, KS2, KSL2, OsKSL2, OsTPS27, OsKSL5 | Detail |
| C1H4g18596 | 4:26,982,575-26,984,834 | - | C2H4g26250 | CX4g035138 | - | Os04g0612100 | - | Detail |
| C1H4g09223 | 4:26,989,071-26,989,550 | - | - | - | - | Os04g0644433 | - | Detail |
| C1H4g23379 | 4:27,000,541-27,005,877 | - | C2H4g26765 | CX4g032492 | LOC_Os04g52270 | Os04g0612600 | - | Detail |
| C1H4g22616 | 4:27,008,639-27,013,797 | + | C2H4g08408 | CX4g036512 | LOC_Os04g52280 | Os04g0612700 | FC1, OsCAD7 | Detail |
| C1H4g13487 | 4:27,013,914-27,016,262 | - | C2H4g11392 | CX4g033473 | LOC_Os04g52290 | Os04g0612800 | - | Detail |
| C1H4g23018 | 4:27,017,080-27,017,602 | + | C2H4g06866 | CX4g035500 | LOC_Os04g52300 | Os04g0612900 | - | Detail |
| C1H4g19703 | 4:27,018,164-27,020,375 | - | C2H4g30388 | CX4g036361 | LOC_Os04g52310 | Os04g0613000 | ZIP3, OsZIP3 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g14118 | 1:32,395,517-32,401,373 | + | C1H1g24327 | CX1g006965 | LOC_Os01g63220 | Os01g0851000 | WLP2, OsFLN1 | Detail |
| C2H1g23902 | 1:32,398,168-32,402,851 | - | C1H1g16353 | CX1g000066 | LOC_Os01g63230 | Os01g0851100 | - | Detail |
| C2H1g01345 | 1:32,406,775-32,409,102 | - | C1H1g19302 | CX1g003216 | LOC_Os01g63240 | Os01g0851300 | - | Detail |
| C2H1g07756 | 1:32,420,236-32,424,345 | - | C1H1g13651 | CX1g000616 | LOC_Os01g63250 | Os01g0851400 | - | Detail |
| C2H1g20633 | 1:32,434,269-32,440,537 | - | C1H1g15673 | CX1g001220 | LOC_Os01g63270 | Os01g0851700 | - | Detail |
| C2H1g02734 | 1:32,446,598-32,449,665 | - | C1H1g03471 | CX1g001145 | LOC_Os01g63280 | Os01g0852100 | - | Detail |
| C2H1g20941 | 1:32,450,205-32,454,017 | - | C1H1g05192 | CX1g001502 | LOC_Os01g63290 | Os01g0852200 | OsPHT4;3 | Detail |
| C2H1g02794 | 1:32,471,192-32,473,761 | - | C1H1g31702 | CX1g006459 | LOC_Os01g63354 | Os01g0852500 | - | Detail |
| C2H1g02458 | 1:32,475,228-32,475,873 | - | C1H1g31702 | CX1g006459 | LOC_Os01g63354 | Os01g0852500 | - | Detail |
| C2H1g22636 | 1:32,481,628-32,483,736 | + | C1H1g31372 | CX1g005825 | LOC_Os01g63400 | Os01g0852900 | - | Detail |
| C2H1g00294 | 1:32,484,972-32,486,025 | - | C1H1g22680 | CX1g001333 | LOC_Os01g63410 | Os01g0853000 | - | Detail |
| C2H1g03435 | 1:32,498,447-32,502,232 | + | C1H1g21861 | CX1g004784 | LOC_Os01g63420 | Os01g0853400 | OsCOI1a, OsCOI1, Os_F0728 | Detail |
| C2H1g21411 | 1:32,510,019-32,510,465 | + | C1H1g01084 | CX1g005287 | - | - | - | Detail |
| C2H1g02642 | 1:32,512,794-32,514,472 | - | C1H1g22221 | CX1g001449 | LOC_Os01g63460 | Os01g0853700 | - | Detail |
| C2H1g15087 | 1:32,557,274-32,557,974 | - | C1H1g30766 | CX1g000677 | LOC_Os01g63510 | Os01g0854500 | QHB | Detail |
| C2H1g11964 | 1:32,568,881-32,574,221 | - | C1H1g06653 | CX1g000343 | LOC_Os01g63580 | Os01g0855000 | - | Detail |
| C2H1g08929 | 1:32,583,855-32,589,389 | - | - | - | - | - | - | Detail |
| C2H1g27825 | 1:32,594,203-32,596,288 | + | C1H1g12873 | CX1g005974 | LOC_Os01g63620 | Os01g0855200 | - | Detail |
| C2H1g08166 | 1:32,609,134-32,611,262 | + | C1H1g14003 | CX1g003617 | LOC_Os01g63680 | Os01g0855400 | Os2R_MYB17 | Detail |
| C2H1g04964 | 1:32,624,570-32,628,271 | + | C1H1g14553 | CX1g004920 | LOC_Os01g63710 | Os01g0856000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |