| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g13663 | 4:26,153,285-26,153,933 | + | C2H4g21457 | CX4g033123 | LOC_Os04g49870 | Os04g0588350 | - | Detail |
| C1H4g24220 | 4:26,155,124-26,155,694 | + | C2H4g04746 | CX4g035605 | LOC_Os04g44610 | Os04g0528300 | - | Detail |
| C1H4g28401 | 4:26,158,567-26,161,296 | + | C2H4g20855 | CX4g035919 | LOC_Os04g50820 | Os04g0594800 | - | Detail |
| C1H4g13631 | 4:26,174,541-26,177,468 | - | C2H4g13854 | CX4g033700 | LOC_Os04g50860 | Os04g0596300 | - | Detail |
| C1H4g13351 | 4:26,178,303-26,181,323 | - | C2H4g30104 | CX4g035693 | LOC_Os04g50864 | Os04g0596400 | - | Detail |
| C1H4g21153 | 4:26,181,875-26,186,890 | - | C2H4g29365 | CX4g036181 | LOC_Os04g50870 | Os04g0596500 | - | Detail |
| C1H4g02289 | 4:26,194,175-26,195,734 | - | C2H4g17490 | CX4g032928 | LOC_Os04g50880 | Os04g0596900 | - | Detail |
| C1H4g20724 | 4:26,196,933-26,200,921 | - | C2H4g16834 | CX4g034929 | LOC_Os04g50890 | Os04g0597000 | - | Detail |
| C1H4g08529 | 4:26,214,629-26,217,768 | + | C2H4g14587 | CX4g031568 | LOC_Os04g50920 | Os04g0597300 | OsWRKY37 | Detail |
| C1H4g06047 | 4:26,227,927-26,231,263 | + | C2H4g10163 | CX4g032482 | LOC_Os04g50930 | Os04g0597400 | OsNPF7.6 | Detail |
| C1H4g02149 | 4:26,234,865-26,237,382 | + | C2H4g28892 | CX4g035098 | LOC_Os04g50940 | Os04g0597600 | OsNPF7.4a, OsNPF7.4 | Detail |
| C1H4g05496 | 4:26,239,940-26,243,399 | + | C2H4g23843 | CX4g035098 | LOC_Os04g50950 | Os04g0597800 | OsPTR6, OsNPF7.3 | Detail |
| C1H4g28441 | 4:26,245,479-26,248,160 | + | C2H4g13606 | CX4g032040 | LOC_Os04g50960 | Os04g0597900 | - | Detail |
| C1H4g06669 | 4:26,248,890-26,251,218 | - | C2H4g26740 | CX4g036258 | LOC_Os04g50970 | Os04g0598000 | - | Detail |
| C1H4g12711 | 4:26,260,419-26,261,159 | - | C2H4g22999 | CX4g034610 | LOC_Os04g51000 | Os04g0598300 | RFL, RFL, OSL, FL, APO2, APO2/RFL | Detail |
| C1H4g18615 | 4:26,262,754-26,264,531 | - | C2H4g22999 | CX4g034610 | LOC_Os04g51000 | Os04g0598300 | RFL, RFL, OSL, FL, APO2, APO2/RFL | Detail |
| C1H4g12663 | 4:26,272,960-26,276,999 | + | C2H4g16283 | CX4g032270 | LOC_Os04g51030 | Os04g0598600 | - | Detail |
| C1H4g19687 | 4:26,287,349-26,292,153 | + | C2H4g19837 | CX4g033918 | LOC_Os04g51030 | Os04g0598600 | - | Detail |
| C1H4g27427 | 4:26,292,947-26,295,452 | - | C2H4g26708 | CX4g033732 | LOC_Os04g51040 | Os04g0598900 | - | Detail |
| C1H4g27024 | 4:26,298,502-26,302,246 | - | C2H4g23112 | CX4g034393 | LOC_Os04g51050 | Os04g0599000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g17168 | 3:26,925,068-26,927,470 | + | C1H3g19413 | CX3g030963 | LOC_Os03g51240 | Os03g0722500 | - | Detail |
| C2H3g09804 | 3:26,927,684-26,932,236 | - | C1H3g19235 | CX3g028000 | LOC_Os03g51250 | Os03g0722600 | - | Detail |
| C2H3g23515 | 3:26,960,809-26,961,797 | + | C1H3g19621 | CX3g025582 | LOC_Os03g51340 | - | - | Detail |
| C2H3g08290 | 3:26,966,779-26,967,821 | + | C1H3g18910 | CX3g030020 | LOC_Os03g51350 | Os03g0723400 | - | Detail |
| C2H3g16773 | 3:26,974,616-26,978,336 | + | C1H3g18603 | CX3g027992 | LOC_Os03g51380 | Os03g0723600 | - | Detail |
| C2H3g17511 | 3:26,985,490-26,986,662 | - | - | - | - | - | - | Detail |
| C2H3g11512 | 3:27,005,216-27,006,777 | + | C1H3g29238 | CX3g025224 | LOC_Os03g51430 | Os03g0724100 | OsSec14-11 | Detail |
| C2H3g26453 | 3:27,008,365-27,012,042 | - | C1H3g20683 | CX3g028077 | LOC_Os03g51440 | Os03g0724300 | - | Detail |
| C2H3g05139 | 3:27,029,616-27,030,005 | - | C1H3g30120 | CX3g025441 | LOC_Os03g51459 | Os03g0724500 | - | Detail |
| C2H3g13019 | 3:27,032,755-27,034,727 | - | C1H3g05968 | CX3g025693 | LOC_Os03g51470 | Os03g0724600 | - | Detail |
| C2H3g05753 | 3:27,035,639-27,037,223 | + | C1H3g04363 | CX3g027196 | LOC_Os03g51479 | Os03g0724700 | - | Detail |
| C2H3g12890 | 3:27,045,422-27,045,733 | + | C1H3g15090 | CX3g028977 | LOC_Os03g51510 | Os03g0725000 | - | Detail |
| C2H3g20716 | 3:27,047,194-27,056,996 | + | C1H3g02037 | CX3g030919 | LOC_Os03g51520 | Os03g0725100 | - | Detail |
| C2H3g06290 | 3:27,058,656-27,064,437 | + | C1H3g18345 | CX3g029201 | LOC_Os03g51530 | Os03g0725200 | - | Detail |
| C2H3g04142 | 3:27,065,261-27,069,025 | + | C1H3g09008 | CX3g028312 | LOC_Os03g51550 | Os03g0725400 | - | Detail |
| C2H3g06970 | 3:27,096,786-27,099,211 | + | C1H3g28685 | CX3g029203 | LOC_Os03g51580 | Os03g0725800 | - | Detail |
| C2H3g30221 | 3:27,102,367-27,103,395 | + | - | - | - | - | - | Detail |
| C2H3g21598 | 3:27,113,077-27,116,055 | + | C1H3g18025 | CX3g026793 | LOC_Os03g51600 | Os03g0726100 | - | Detail |
| C2H3g10415 | 3:27,122,480-27,128,188 | + | C1H3g31013 | CX3g027533 | LOC_Os03g51610 | Os03g0726200 | - | Detail |
| C2H3g30083 | 3:27,130,646-27,135,460 | - | C1H3g03565 | CX3g030086 | LOC_Os03g51620 | Os03g0726300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |