| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g13663 | 4:26,153,285-26,153,933 | + | C2H4g21457 | CX4g033123 | LOC_Os04g49870 | Os04g0588350 | - | Detail |
| C1H4g24220 | 4:26,155,124-26,155,694 | + | C2H4g04746 | CX4g035605 | LOC_Os04g44610 | Os04g0528300 | - | Detail |
| C1H4g28401 | 4:26,158,567-26,161,296 | + | C2H4g20855 | CX4g035919 | LOC_Os04g50820 | Os04g0594800 | - | Detail |
| C1H4g13631 | 4:26,174,541-26,177,468 | - | C2H4g13854 | CX4g033700 | LOC_Os04g50860 | Os04g0596300 | - | Detail |
| C1H4g13351 | 4:26,178,303-26,181,323 | - | C2H4g30104 | CX4g035693 | LOC_Os04g50864 | Os04g0596400 | - | Detail |
| C1H4g21153 | 4:26,181,875-26,186,890 | - | C2H4g29365 | CX4g036181 | LOC_Os04g50870 | Os04g0596500 | - | Detail |
| C1H4g02289 | 4:26,194,175-26,195,734 | - | C2H4g17490 | CX4g032928 | LOC_Os04g50880 | Os04g0596900 | - | Detail |
| C1H4g20724 | 4:26,196,933-26,200,921 | - | C2H4g16834 | CX4g034929 | LOC_Os04g50890 | Os04g0597000 | - | Detail |
| C1H4g08529 | 4:26,214,629-26,217,768 | + | C2H4g14587 | CX4g031568 | LOC_Os04g50920 | Os04g0597300 | OsWRKY37 | Detail |
| C1H4g06047 | 4:26,227,927-26,231,263 | + | C2H4g10163 | CX4g032482 | LOC_Os04g50930 | Os04g0597400 | OsNPF7.6 | Detail |
| C1H4g02149 | 4:26,234,865-26,237,382 | + | C2H4g28892 | CX4g035098 | LOC_Os04g50940 | Os04g0597600 | OsNPF7.4a, OsNPF7.4 | Detail |
| C1H4g05496 | 4:26,239,940-26,243,399 | + | C2H4g23843 | CX4g035098 | LOC_Os04g50950 | Os04g0597800 | OsPTR6, OsNPF7.3 | Detail |
| C1H4g28441 | 4:26,245,479-26,248,160 | + | C2H4g13606 | CX4g032040 | LOC_Os04g50960 | Os04g0597900 | - | Detail |
| C1H4g06669 | 4:26,248,890-26,251,218 | - | C2H4g26740 | CX4g036258 | LOC_Os04g50970 | Os04g0598000 | - | Detail |
| C1H4g12711 | 4:26,260,419-26,261,159 | - | C2H4g22999 | CX4g034610 | LOC_Os04g51000 | Os04g0598300 | RFL, RFL, OSL, FL, APO2, APO2/RFL | Detail |
| C1H4g18615 | 4:26,262,754-26,264,531 | - | C2H4g22999 | CX4g034610 | LOC_Os04g51000 | Os04g0598300 | RFL, RFL, OSL, FL, APO2, APO2/RFL | Detail |
| C1H4g12663 | 4:26,272,960-26,276,999 | + | C2H4g16283 | CX4g032270 | LOC_Os04g51030 | Os04g0598600 | - | Detail |
| C1H4g19687 | 4:26,287,349-26,292,153 | + | C2H4g19837 | CX4g033918 | LOC_Os04g51030 | Os04g0598600 | - | Detail |
| C1H4g27427 | 4:26,292,947-26,295,452 | - | C2H4g26708 | CX4g033732 | LOC_Os04g51040 | Os04g0598900 | - | Detail |
| C1H4g27024 | 4:26,298,502-26,302,246 | - | C2H4g23112 | CX4g034393 | LOC_Os04g51050 | Os04g0599000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g27377 | 2:31,147,215-31,151,596 | + | C1H2g22350 | CX2g022127 | LOC_Os02g55910 | Os02g0802700 | OsMGD2 | Detail |
| C2H2g20108 | 2:31,156,425-31,156,652 | + | C1H8g21125 | CX8g052993 | - | - | - | Detail |
| C2H2g19776 | 2:31,161,375-31,164,320 | + | C1H2g19124 | CX2g023429 | LOC_Os02g55940 | Os02g0803200 | - | Detail |
| C2H2g02168 | 2:31,164,868-31,173,358 | + | C1H2g20796 | CX2g020375 | LOC_Os02g55950 | Os02g0803250 | - | Detail |
| C2H2g12868 | 2:31,165,042-31,169,443 | - | C1H2g16610 | - | - | - | - | Detail |
| C2H2g09719 | 2:31,177,748-31,181,206 | + | C1H2g28140 | CX2g020265 | LOC_Os02g55970 | Os02g0803300 | - | Detail |
| C2H2g22479 | 2:31,182,000-31,182,890 | - | C1H2g29422 | CX2g018868 | LOC_Os02g55980 | Os02g0803400 | - | Detail |
| C2H2g05755 | 2:31,184,987-31,186,499 | + | C1H2g14622 | CX2g022206 | LOC_Os02g55990 | Os02g0803600 | - | Detail |
| C2H2g01956 | 2:31,186,968-31,190,821 | - | C1H2g12587 | CX2g021842 | LOC_Os02g56000 | Os02g0803700 | - | Detail |
| C2H2g27448 | 2:31,222,073-31,222,944 | - | C1H6g22975 | CX2g021501 | LOC_Os02g56014 | Os02g0804100 | - | Detail |
| C2H2g02958 | 2:31,222,585-31,225,421 | + | C1H2g20947 | CX2g023214 | LOC_Os02g56020 | Os02g0804300 | - | Detail |
| C2H2g06460 | 2:31,225,608-31,226,339 | + | C1H2g11666 | CX2g019813 | LOC_Os02g56030 | Os02g0804400 | - | Detail |
| C2H2g06255 | 2:31,226,706-31,233,843 | - | C1H2g07400 | CX2g020092 | LOC_Os02g56040 | Os02g0804500 | OsDjA2 | Detail |
| C2H2g30585 | 2:31,235,588-31,239,035 | - | C1H2g26632 | CX2g021763 | LOC_Os02g56050 | Os02g0804600 | - | Detail |
| C2H2g02634 | 2:31,240,060-31,242,017 | + | C1H2g22511 | - | LOC_Os02g56090 | Os02g0804800 | - | Detail |
| C2H2g25841 | 2:31,243,789-31,248,191 | + | C1H2g22356 | CX2g021393 | LOC_Os02g56100 | Os02g0804900 | RNRL2 | Detail |
| C2H2g24175 | 2:31,251,377-31,259,875 | - | C1H2g06681 | CX2g021776 | LOC_Os02g56110 | Os02g0805000 | - | Detail |
| C2H2g17406 | 2:31,265,696-31,266,498 | + | C1H2g26955 | CX2g023851 | LOC_Os02g56120 | Os02g0805100 | - | Detail |
| C2H2g05865 | 2:31,268,106-31,269,817 | + | C1H2g10518 | CX2g022924 | LOC_Os02g56130 | Os02g0805200 | OsPCNA | Detail |
| C2H2g03605 | 2:31,271,138-31,272,864 | - | C1H2g21301 | CX2g024641 | LOC_Os02g56140 | Os02g0805250 | OsbHLH107 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |