| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g13663 | 4:26,153,285-26,153,933 | + | C2H4g21457 | CX4g033123 | LOC_Os04g49870 | Os04g0588350 | - | Detail |
| C1H4g24220 | 4:26,155,124-26,155,694 | + | C2H4g04746 | CX4g035605 | LOC_Os04g44610 | Os04g0528300 | - | Detail |
| C1H4g28401 | 4:26,158,567-26,161,296 | + | C2H4g20855 | CX4g035919 | LOC_Os04g50820 | Os04g0594800 | - | Detail |
| C1H4g13631 | 4:26,174,541-26,177,468 | - | C2H4g13854 | CX4g033700 | LOC_Os04g50860 | Os04g0596300 | - | Detail |
| C1H4g13351 | 4:26,178,303-26,181,323 | - | C2H4g30104 | CX4g035693 | LOC_Os04g50864 | Os04g0596400 | - | Detail |
| C1H4g21153 | 4:26,181,875-26,186,890 | - | C2H4g29365 | CX4g036181 | LOC_Os04g50870 | Os04g0596500 | - | Detail |
| C1H4g02289 | 4:26,194,175-26,195,734 | - | C2H4g17490 | CX4g032928 | LOC_Os04g50880 | Os04g0596900 | - | Detail |
| C1H4g20724 | 4:26,196,933-26,200,921 | - | C2H4g16834 | CX4g034929 | LOC_Os04g50890 | Os04g0597000 | - | Detail |
| C1H4g08529 | 4:26,214,629-26,217,768 | + | C2H4g14587 | CX4g031568 | LOC_Os04g50920 | Os04g0597300 | OsWRKY37 | Detail |
| C1H4g06047 | 4:26,227,927-26,231,263 | + | C2H4g10163 | CX4g032482 | LOC_Os04g50930 | Os04g0597400 | OsNPF7.6 | Detail |
| C1H4g02149 | 4:26,234,865-26,237,382 | + | C2H4g28892 | CX4g035098 | LOC_Os04g50940 | Os04g0597600 | OsNPF7.4a, OsNPF7.4 | Detail |
| C1H4g05496 | 4:26,239,940-26,243,399 | + | C2H4g23843 | CX4g035098 | LOC_Os04g50950 | Os04g0597800 | OsPTR6, OsNPF7.3 | Detail |
| C1H4g28441 | 4:26,245,479-26,248,160 | + | C2H4g13606 | CX4g032040 | LOC_Os04g50960 | Os04g0597900 | - | Detail |
| C1H4g06669 | 4:26,248,890-26,251,218 | - | C2H4g26740 | CX4g036258 | LOC_Os04g50970 | Os04g0598000 | - | Detail |
| C1H4g12711 | 4:26,260,419-26,261,159 | - | C2H4g22999 | CX4g034610 | LOC_Os04g51000 | Os04g0598300 | RFL, RFL, OSL, FL, APO2, APO2/RFL | Detail |
| C1H4g18615 | 4:26,262,754-26,264,531 | - | C2H4g22999 | CX4g034610 | LOC_Os04g51000 | Os04g0598300 | RFL, RFL, OSL, FL, APO2, APO2/RFL | Detail |
| C1H4g12663 | 4:26,272,960-26,276,999 | + | C2H4g16283 | CX4g032270 | LOC_Os04g51030 | Os04g0598600 | - | Detail |
| C1H4g19687 | 4:26,287,349-26,292,153 | + | C2H4g19837 | CX4g033918 | LOC_Os04g51030 | Os04g0598600 | - | Detail |
| C1H4g27427 | 4:26,292,947-26,295,452 | - | C2H4g26708 | CX4g033732 | LOC_Os04g51040 | Os04g0598900 | - | Detail |
| C1H4g27024 | 4:26,298,502-26,302,246 | - | C2H4g23112 | CX4g034393 | LOC_Os04g51050 | Os04g0599000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g17764 | 2:16,383,359-16,384,768 | + | C1H2g17511 | CX2g024525 | LOC_Os02g28340 | Os02g0485000 | - | Detail |
| C2H2g19393 | 2:16,408,550-16,410,770 | - | C1H2g19424 | - | - | - | - | Detail |
| C2H2g27926 | 2:16,443,788-16,447,280 | + | C1H2g15604 | CX2g020358 | LOC_Os02g28580 | Os02g0487300 | - | Detail |
| C2H2g16337 | 2:16,470,195-16,472,328 | + | C1H2g04842 | CX2g020358 | LOC_Os02g28660 | Os02g0487300 | - | Detail |
| C2H2g28503 | 2:16,480,601-16,482,393 | + | C1H2g29692 | CX2g019368 | LOC_Os02g28680 | Os02g0487300 | - | Detail |
| C2H2g13549 | 2:16,490,753-16,494,448 | - | C1H2g25610 | CX2g019609 | LOC_Os02g28720 | Os02g0488600 | - | Detail |
| C2H2g09159 | 2:16,526,872-16,529,420 | + | C1H2g24376 | CX2g019939 | LOC_Os02g28810 | Os02g0489400 | - | Detail |
| C2H2g07433 | 2:16,531,250-16,534,663 | + | C1H2g28295 | CX2g021075 | LOC_Os02g28820 | Os02g0489500 | - | Detail |
| C2H2g29338 | 2:16,535,522-16,547,844 | - | C1H2g07614 | CX2g022951 | LOC_Os02g28830 | Os02g0489550 | - | Detail |
| C2H2g10751 | 2:16,561,956-16,569,651 | + | C1H2g03753 | CX2g022420 | LOC_Os02g28850 | Os02g0489800 | - | Detail |
| C2H2g23190 | 2:16,571,593-16,572,016 | + | C1H2g30410 | - | - | - | - | Detail |
| C2H2g28147 | 2:16,572,313-16,572,666 | + | C1H2g18528 | CX2g020775 | - | - | - | Detail |
| C2H2g14694 | 2:16,573,416-16,576,582 | + | C1H2g12378 | CX2g024603 | LOC_Os02g28870 | Os02g0490000 | OsPUB73 | Detail |
| C2H2g19151 | 2:16,592,116-16,594,178 | + | C1H2g31655 | CX2g020830 | LOC_Os02g28900 | Os02g0490500 | - | Detail |
| C2H2g16996 | 2:16,599,152-16,600,759 | - | C1H2g05275 | CX2g022060 | LOC_Os02g28900 | Os02g0490500 | - | Detail |
| C2H2g26220 | 2:16,602,987-16,603,998 | + | - | CX2g020042 | - | - | - | Detail |
| C2H2g25066 | 2:16,625,275-16,626,849 | + | C1H2g10622 | CX2g024900 | LOC_Os02g28900 | Os02g0490500 | - | Detail |
| C2H2g22171 | 2:16,655,454-16,659,558 | - | C1H2g23595 | CX2g022120 | LOC_Os02g28980 | Os02g0491400 | rFKBP75 | Detail |
| C2H2g20082 | 2:16,677,034-16,677,843 | - | C1H2g19165 | CX2g019698 | LOC_Os02g29000 | Os02g0491600 | - | Detail |
| C2H2g19644 | 2:16,679,269-16,680,029 | + | C1H2g09173 | CX2g023919 | LOC_Os02g29010 | Os02g0491700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |