| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g13663 | 4:26,153,285-26,153,933 | + | C2H4g21457 | CX4g033123 | LOC_Os04g49870 | Os04g0588350 | - | Detail |
| C1H4g24220 | 4:26,155,124-26,155,694 | + | C2H4g04746 | CX4g035605 | LOC_Os04g44610 | Os04g0528300 | - | Detail |
| C1H4g28401 | 4:26,158,567-26,161,296 | + | C2H4g20855 | CX4g035919 | LOC_Os04g50820 | Os04g0594800 | - | Detail |
| C1H4g13631 | 4:26,174,541-26,177,468 | - | C2H4g13854 | CX4g033700 | LOC_Os04g50860 | Os04g0596300 | - | Detail |
| C1H4g13351 | 4:26,178,303-26,181,323 | - | C2H4g30104 | CX4g035693 | LOC_Os04g50864 | Os04g0596400 | - | Detail |
| C1H4g21153 | 4:26,181,875-26,186,890 | - | C2H4g29365 | CX4g036181 | LOC_Os04g50870 | Os04g0596500 | - | Detail |
| C1H4g02289 | 4:26,194,175-26,195,734 | - | C2H4g17490 | CX4g032928 | LOC_Os04g50880 | Os04g0596900 | - | Detail |
| C1H4g20724 | 4:26,196,933-26,200,921 | - | C2H4g16834 | CX4g034929 | LOC_Os04g50890 | Os04g0597000 | - | Detail |
| C1H4g08529 | 4:26,214,629-26,217,768 | + | C2H4g14587 | CX4g031568 | LOC_Os04g50920 | Os04g0597300 | OsWRKY37 | Detail |
| C1H4g06047 | 4:26,227,927-26,231,263 | + | C2H4g10163 | CX4g032482 | LOC_Os04g50930 | Os04g0597400 | OsNPF7.6 | Detail |
| C1H4g02149 | 4:26,234,865-26,237,382 | + | C2H4g28892 | CX4g035098 | LOC_Os04g50940 | Os04g0597600 | OsNPF7.4a, OsNPF7.4 | Detail |
| C1H4g05496 | 4:26,239,940-26,243,399 | + | C2H4g23843 | CX4g035098 | LOC_Os04g50950 | Os04g0597800 | OsPTR6, OsNPF7.3 | Detail |
| C1H4g28441 | 4:26,245,479-26,248,160 | + | C2H4g13606 | CX4g032040 | LOC_Os04g50960 | Os04g0597900 | - | Detail |
| C1H4g06669 | 4:26,248,890-26,251,218 | - | C2H4g26740 | CX4g036258 | LOC_Os04g50970 | Os04g0598000 | - | Detail |
| C1H4g12711 | 4:26,260,419-26,261,159 | - | C2H4g22999 | CX4g034610 | LOC_Os04g51000 | Os04g0598300 | RFL, RFL, OSL, FL, APO2, APO2/RFL | Detail |
| C1H4g18615 | 4:26,262,754-26,264,531 | - | C2H4g22999 | CX4g034610 | LOC_Os04g51000 | Os04g0598300 | RFL, RFL, OSL, FL, APO2, APO2/RFL | Detail |
| C1H4g12663 | 4:26,272,960-26,276,999 | + | C2H4g16283 | CX4g032270 | LOC_Os04g51030 | Os04g0598600 | - | Detail |
| C1H4g19687 | 4:26,287,349-26,292,153 | + | C2H4g19837 | CX4g033918 | LOC_Os04g51030 | Os04g0598600 | - | Detail |
| C1H4g27427 | 4:26,292,947-26,295,452 | - | C2H4g26708 | CX4g033732 | LOC_Os04g51040 | Os04g0598900 | - | Detail |
| C1H4g27024 | 4:26,298,502-26,302,246 | - | C2H4g23112 | CX4g034393 | LOC_Os04g51050 | Os04g0599000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g00971 | 1:5,859,204-5,859,838 | + | C1H1g19821 | CX1g004493 | - | - | - | Detail |
| C2H1g25264 | 1:5,864,342-5,865,704 | - | C1H1g27706 | CX1g005454 | LOC_Os01g12130 | Os01g0881300 | - | Detail |
| C2H1g05073 | 1:5,870,550-5,876,810 | - | C1H1g25539 | CX1g005696 | LOC_Os01g12160 | Os01g0221100 | - | Detail |
| C2H1g06563 | 1:5,889,109-5,891,215 | - | C1H1g22662 | CX1g004361 | LOC_Os01g12180 | Os01g0221300 | - | Detail |
| C2H1g28766 | 1:5,895,941-5,896,186 | + | - | CX1g000729 | LOC_Os01g12190 | Os01g0221400 | - | Detail |
| C2H1g01549 | 1:5,899,024-5,900,025 | + | C1H1g19527 | CX1g003668 | LOC_Os01g12200 | Os01g0221500 | - | Detail |
| C2H1g18975 | 1:5,903,384-5,904,730 | + | C1H1g19527 | CX1g003668 | LOC_Os01g12200 | - | - | Detail |
| C2H1g21998 | 1:5,908,362-5,911,459 | + | C1H1g01490 | CX1g006663 | LOC_Os01g12210 | Os01g0221600 | OsALMT4 | Detail |
| C2H1g27039 | 1:5,912,299-5,916,790 | + | C1H1g22839 | CX1g004398 | LOC_Os01g12220 | Os01g0221700 | - | Detail |
| C2H1g08706 | 1:5,916,800-5,922,270 | - | C1H1g04353 | CX1g001480 | LOC_Os01g12230 | Os01g0221900 | - | Detail |
| C2H1g18747 | 1:5,948,489-5,952,365 | - | C1H1g22163 | CX1g007256 | LOC_Os01g12250 | Os01g0222300 | - | Detail |
| C2H1g08232 | 1:5,953,669-5,957,124 | - | C1H1g18905 | CX1g000307 | LOC_Os01g12260 | Os01g0222500 | - | Detail |
| C2H1g14445 | 1:5,957,599-5,964,087 | - | C1H1g26521 | CX1g003772 | LOC_Os01g12280 | Os01g0222700 | - | Detail |
| C2H1g13603 | 1:5,964,530-5,971,389 | + | C1H1g19662 | CX1g005820 | LOC_Os01g12290 | Os01g0222900 | - | Detail |
| C2H1g07016 | 1:5,972,010-5,973,529 | - | C1H1g17957 | CX1g003813 | LOC_Os01g12304 | Os01g0223000 | - | Detail |
| C2H1g24822 | 1:5,978,786-5,981,140 | - | C1H1g06344 | CX1g006438 | LOC_Os01g12320 | Os01g0223200 | - | Detail |
| C2H1g23145 | 1:5,981,158-5,981,487 | - | C1H1g05231 | CX1g006438 | LOC_Os01g12381 | Os01g0223200 | - | Detail |
| C2H1g12626 | 1:5,984,326-5,986,602 | + | C1H1g10176 | CX1g005986 | LOC_Os01g12330 | Os01g0223300 | - | Detail |
| C2H1g16700 | 1:5,988,514-5,990,813 | - | C1H1g23419 | CX1g007036 | LOC_Os01g12381 | Os01g0223500 | - | Detail |
| C2H1g12655 | 1:5,991,154-5,994,858 | - | C1H1g06578 | CX1g001470 | LOC_Os01g12390 | Os01g0223600 | OsSRLK | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |