| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g24238 | 4:25,628,816-25,629,641 | - | C2H4g27086 | - | - | - | - | Detail |
| C1H4g00268 | 4:25,639,643-25,640,314 | - | C2H4g21376 | CX4g031720 | LOC_Os04g49370 | Os04g0583200 | - | Detail |
| C1H4g05377 | 4:25,646,411-25,649,591 | + | C2H4g06128 | CX4g035915 | LOC_Os04g49410 | Os04g0583500 | - | Detail |
| C1H4g10611 | 4:25,658,527-25,664,246 | + | C2H4g03384 | CX4g033604 | LOC_Os04g49430 | Os04g0583700 | - | Detail |
| C1H4g25778 | 4:25,664,394-25,665,258 | + | C2H4g01268 | CX4g035620 | LOC_Os04g49440 | Os04g0583800 | - | Detail |
| C1H4g02637 | 4:25,666,267-25,668,473 | - | C2H4g28246 | CX4g032810 | LOC_Os04g49450 | Os04g0583900 | OsMYBR1 | Detail |
| C1H4g19370 | 4:25,672,798-25,678,803 | - | C2H4g25417 | CX4g033055 | LOC_Os04g49480 | Os04g0584100 | - | Detail |
| C1H4g21934 | 4:25,679,481-25,681,903 | - | C2H4g23268 | CX4g034658 | LOC_Os04g49490 | Os04g0584300 | - | Detail |
| C1H4g16992 | 4:25,686,061-25,687,748 | + | C2H4g28486 | CX4g033783 | LOC_Os04g49500 | Os04g0584500 | - | Detail |
| C1H4g28792 | 4:25,689,795-25,690,771 | + | - | CX4g033783 | - | - | - | Detail |
| C1H4g24874 | 4:25,696,349-25,701,110 | + | C2H4g17908 | CX4g033315 | LOC_Os04g49510 | Os04g0584600 | - | Detail |
| C1H4g08643 | 4:25,704,116-25,706,969 | + | C2H4g09139 | CX4g033560 | LOC_Os04g49530 | Os04g0584800 | - | Detail |
| C1H4g15954 | 4:25,707,294-25,709,859 | - | C2H4g09773 | CX4g034212 | LOC_Os04g49540 | Os04g0584900 | - | Detail |
| C1H4g04008 | 4:25,721,700-25,728,251 | - | C2H4g30371 | CX4g033323 | LOC_Os04g49560 | Os04g0585100 | - | Detail |
| C1H4g02770 | 4:25,731,050-25,735,734 | - | C2H4g20709 | CX4g035018 | LOC_Os04g49570 | Os04g0585200 | OsGLR4.1 | Detail |
| C1H4g07246 | 4:25,737,275-25,742,931 | - | C2H4g02580 | CX4g035353 | LOC_Os04g49580 | Os04g0585300 | - | Detail |
| C1H4g19488 | 4:25,743,865-25,746,298 | - | C2H4g10022 | CX4g035330 | LOC_Os04g49590 | Os04g0585400 | - | Detail |
| C1H4g16820 | 4:25,747,113-25,748,905 | - | C2H4g11776 | CX4g033099 | LOC_Os04g49610 | Os04g0585600 | - | Detail |
| C1H4g09246 | 4:25,753,094-25,754,709 | - | C2H4g11266 | - | LOC_Os04g49620 | Os04g0585700 | - | Detail |
| C1H4g23552 | 4:25,764,445-25,765,425 | + | C2H4g23175 | CX4g033332 | LOC_Os04g52560 | Os04g0421700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g00999 | 1:23,689,204-23,696,602 | + | C1H1g24345 | CX1g000702 | LOC_Os01g46700 | Os01g0655300 | SDG705, OsSDG705 | Detail |
| C2H1g28065 | 1:23,699,226-23,705,202 | - | C1H1g19947 | CX1g003368 | LOC_Os01g46710 | Os01g0655400 | - | Detail |
| C2H1g30387 | 1:23,709,236-23,714,872 | + | C1H1g28980 | - | LOC_Os01g46720 | Os01g0655500 | - | Detail |
| C2H1g10347 | 1:23,737,348-23,745,276 | + | C1H1g06509 | CX1g005157 | LOC_Os01g46750 | Os01g0655800 | - | Detail |
| C2H1g08099 | 1:23,756,376-23,757,278 | + | C1H1g10344 | CX1g001306 | LOC_Os01g46760 | Os01g0656200 | OsPP2C8 | Detail |
| C2H1g01219 | 1:23,758,274-23,761,574 | + | C1H1g10344 | CX1g001306 | LOC_Os01g46760 | Os01g0656200 | OsPP2C8 | Detail |
| C2H1g14070 | 1:23,770,009-23,771,223 | - | C1H1g15601 | CX1g006460 | LOC_Os01g46800 | Os01g0656400 | - | Detail |
| C2H1g24475 | 1:23,783,797-23,790,491 | - | C1H1g28624 | CX1g005546 | LOC_Os01g46810 | Os01g0656600 | - | Detail |
| C2H1g08798 | 1:23,798,198-23,802,207 | + | C1H1g31021 | CX1g002002 | LOC_Os01g46840 | Os01g0656900 | - | Detail |
| C2H1g22347 | 1:23,802,991-23,805,034 | + | C1H1g21539 | CX1g004768 | LOC_Os01g46850 | Os01g0657000 | - | Detail |
| C2H1g08096 | 1:23,805,743-23,807,503 | - | C1H1g07661 | CX1g000538 | LOC_Os01g46860 | Os01g0657100 | PT11, OsPT11, PHT1-11, OsPht1;11, ORYsa;PHT1;11 | Detail |
| C2H1g24228 | 1:23,842,659-23,845,481 | - | C1H1g13139 | CX1g006603 | LOC_Os01g46926 | Os01g0658400 | UBC5A, OsUBC5a, OsUBC14, UBC14 | Detail |
| C2H1g04871 | 1:23,846,527-23,850,261 | - | C1H1g10996 | CX1g000846 | LOC_Os01g46932 | Os01g0658500 | - | Detail |
| C2H1g09647 | 1:23,851,709-23,853,102 | + | C1H1g26752 | CX1g005848 | LOC_Os01g46940 | Os01g0658600 | - | Detail |
| C2H1g29071 | 1:23,853,214-23,857,312 | - | C1H1g21735 | CX1g001447 | LOC_Os01g46950 | Os01g0658700 | - | Detail |
| C2H1g04805 | 1:23,861,989-23,865,157 | - | C1H1g14446 | CX1g002678 | LOC_Os01g46970 | Os01g0658900 | OSBZ8 | Detail |
| C2H1g26234 | 1:23,875,172-23,879,755 | + | C1H1g08063 | CX1g006783 | LOC_Os01g46980 | Os01g0659200 | OsVHA-E1, GPA8 | Detail |
| C2H1g17847 | 1:23,917,994-23,920,288 | + | C1H1g17216 | CX1g000172 | LOC_Os01g47050 | Os01g0659900 | OsFBK1 | Detail |
| C2H1g22853 | 1:23,921,971-23,924,322 | + | - | - | - | - | - | Detail |
| C2H1g14071 | 1:23,928,057-23,928,230 | + | C1H1g27341 | CX1g005495 | LOC_Os01g47070 | Os01g0660200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |