| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g23154 | 4:25,375,879-25,376,383 | + | C2H4g16720 | CX4g035222 | LOC_Os04g48870 | Os04g0578300 | - | Detail |
| C1H4g05799 | 4:25,380,434-25,382,490 | + | C2H4g19270 | CX4g033101 | LOC_Os04g48880 | Os04g0578400 | - | Detail |
| C1H4g10126 | 4:25,385,788-25,387,233 | + | C2H4g07940 | CX4g036080 | - | Os04g0578550 | - | Detail |
| C1H4g19909 | 4:25,389,934-25,392,744 | - | C2H4g30133 | CX4g031675 | LOC_Os04g48930 | Os04g0578600 | OsFRO2, OsFRO1 | Detail |
| C1H4g18610 | 4:25,395,649-25,402,145 | + | C2H4g19460 | CX4g031656 | LOC_Os04g48940 | Os04g0578700 | - | Detail |
| C1H4g06167 | 4:25,403,323-25,405,698 | - | C2H4g08137 | CX4g031706 | LOC_Os04g48950 | Os04g0578800 | - | Detail |
| C1H4g02070 | 4:25,453,772-25,456,031 | + | C2H4g23542 | CX4g031363 | LOC_Os04g49060 | Os04g0579700 | - | Detail |
| C1H4g09996 | 4:25,478,430-25,481,611 | - | C2H4g28226 | - | LOC_Os04g49130 | Os04g0580400 | OsSCE3 | Detail |
| C1H4g17233 | 4:25,493,735-25,494,082 | + | - | - | - | - | - | Detail |
| C1H4g28417 | 4:25,494,507-25,500,090 | + | C2H4g28180 | CX4g036099 | LOC_Os04g49150 | Os04g0580700 | MADS17, OsMADS17, NMADS3, RMADS213, nmads3 | Detail |
| C1H4g25535 | 4:25,522,941-25,524,543 | - | - | CX12g016081 | LOC_Os12g18450 | - | - | Detail |
| C1H4g30271 | 4:25,528,884-25,529,605 | + | C2H4g16797 | CX4g035989 | LOC_Os04g49194 | Os04g0581000 | OsSAH2 | Detail |
| C1H4g21644 | 4:25,533,632-25,535,003 | + | C2H4g02021 | CX4g035989 | LOC_Os04g49194 | Os04g0581000 | OsSAH2 | Detail |
| C1H4g27247 | 4:25,536,556-25,537,960 | - | C2H4g17595 | CX4g034941 | LOC_Os04g49210 | Os04g0581100 | OsSAH3 | Detail |
| C1H4g19809 | 4:25,548,364-25,551,428 | - | C2H4g22618 | CX4g034701 | LOC_Os04g49220 | Os04g0581300 | - | Detail |
| C1H4g26375 | 4:25,602,473-25,602,983 | - | C2H4g27357 | CX4g036477 | LOC_Os04g49260 | Os04g0581800 | - | Detail |
| C1H4g04071 | 4:25,605,130-25,609,018 | - | C2H4g21103 | CX4g033493 | LOC_Os04g49270 | Os04g0582000 | OsDNA2_12 | Detail |
| C1H4g14184 | 4:25,610,403-25,615,940 | - | C2H4g08363 | CX4g033493 | LOC_Os04g49310 | Os04g0582600 | OsDNA2_13 | Detail |
| C1H4g22667 | 4:25,617,263-25,622,773 | - | C2H4g18439 | CX4g036138 | LOC_Os04g49320 | Os04g0582700 | OsDNA2_10 | Detail |
| C1H4g13543 | 4:25,624,250-25,626,330 | - | C2H4g27939 | CX4g036138 | LOC_Os04g49340 | Os04g0582900 | OsDNA2_11 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H8g13710 | 8:19,260,231-19,263,568 | - | C1H8g18379 | - | LOC_Os08g35900 | Os08g0461000 | - | Detail |
| C2H8g13656 | 8:19,264,802-19,268,588 | - | C1H8g09966 | - | LOC_Os08g35930 | Os08g0461300 | - | Detail |
| C2H8g26333 | 8:19,272,147-19,276,853 | - | C1H8g08122 | - | LOC_Os08g35900 | Os08g0461700 | - | Detail |
| C2H8g06030 | 8:19,277,082-19,280,342 | - | C1H8g19682 | - | LOC_Os08g35960 | Os08g0461800 | - | Detail |
| C2H8g28141 | 8:19,281,476-19,283,279 | - | C1H8g08840 | - | LOC_Os08g36000 | Os08g0462300 | - | Detail |
| C2H8g19475 | 8:19,285,843-19,287,874 | - | C1H8g08751 | - | LOC_Os08g36010 | Os08g0462300 | - | Detail |
| C2H8g17276 | 8:19,299,128-19,304,338 | + | C1H8g09022 | CX8g052774 | LOC_Os08g36020 | Os08g0462700 | OsBRXL1, OsBRXL4 | Detail |
| C2H8g20598 | 8:19,307,091-19,308,044 | - | C1H8g23093 | CX8g053459 | LOC_Os08g36030 | Os08g0462800 | - | Detail |
| C2H8g03012 | 8:19,310,962-19,311,891 | - | C1H8g23093 | CX8g052923 | LOC_Os08g36040 | Os08g0462900 | - | Detail |
| C2H8g15620 | 8:19,315,202-19,315,426 | - | C1H8g15621 | - | LOC_Os08g36050 | - | - | Detail |
| C2H8g08329 | 8:19,338,609-19,339,532 | + | C1H8g19480 | CX8g051103 | LOC_Os08g36110 | Os08g0463500 | - | Detail |
| C2H8g09172 | 8:19,345,885-19,347,968 | + | C1H8g15052 | - | LOC_Os08g36140 | Os08g0463900 | - | Detail |
| C2H8g06047 | 8:19,351,777-19,354,194 | - | C1H8g18952 | CX8g054112 | LOC_Os08g36150 | Os08g0464000 | - | Detail |
| C2H8g18860 | 8:19,367,106-19,368,044 | + | C1H8g24359 | CX8g050999 | LOC_Os08g36170 | Os08g0464400 | - | Detail |
| C2H8g18058 | 8:19,380,443-19,380,850 | - | C1H8g19153 | CX8g054214 | LOC_Os08g36220 | Os08g0465000 | - | Detail |
| C2H8g15248 | 8:19,380,900-19,381,823 | - | C1H8g19153 | CX8g054214 | LOC_Os08g36220 | Os08g0465000 | - | Detail |
| C2H8g06076 | 8:19,386,127-19,386,363 | - | - | CX8g052954 | - | - | - | Detail |
| C2H8g00226 | 8:19,398,227-19,399,729 | + | C1H8g02946 | CX8g053518 | LOC_Os08g36310 | Os08g0465700 | - | Detail |
| C2H8g06054 | 8:19,402,396-19,406,776 | - | C1H8g28808 | CX8g050894 | LOC_Os08g36320 | Os08g0465800 | RicGAD | Detail |
| C2H8g28318 | 8:19,412,111-19,413,679 | + | C1H5g11456 | CX8g053369 | - | Os05g0160800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |