| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g23154 | 4:25,375,879-25,376,383 | + | C2H4g16720 | CX4g035222 | LOC_Os04g48870 | Os04g0578300 | - | Detail |
| C1H4g05799 | 4:25,380,434-25,382,490 | + | C2H4g19270 | CX4g033101 | LOC_Os04g48880 | Os04g0578400 | - | Detail |
| C1H4g10126 | 4:25,385,788-25,387,233 | + | C2H4g07940 | CX4g036080 | - | Os04g0578550 | - | Detail |
| C1H4g19909 | 4:25,389,934-25,392,744 | - | C2H4g30133 | CX4g031675 | LOC_Os04g48930 | Os04g0578600 | OsFRO2, OsFRO1 | Detail |
| C1H4g18610 | 4:25,395,649-25,402,145 | + | C2H4g19460 | CX4g031656 | LOC_Os04g48940 | Os04g0578700 | - | Detail |
| C1H4g06167 | 4:25,403,323-25,405,698 | - | C2H4g08137 | CX4g031706 | LOC_Os04g48950 | Os04g0578800 | - | Detail |
| C1H4g02070 | 4:25,453,772-25,456,031 | + | C2H4g23542 | CX4g031363 | LOC_Os04g49060 | Os04g0579700 | - | Detail |
| C1H4g09996 | 4:25,478,430-25,481,611 | - | C2H4g28226 | - | LOC_Os04g49130 | Os04g0580400 | OsSCE3 | Detail |
| C1H4g17233 | 4:25,493,735-25,494,082 | + | - | - | - | - | - | Detail |
| C1H4g28417 | 4:25,494,507-25,500,090 | + | C2H4g28180 | CX4g036099 | LOC_Os04g49150 | Os04g0580700 | MADS17, OsMADS17, NMADS3, RMADS213, nmads3 | Detail |
| C1H4g25535 | 4:25,522,941-25,524,543 | - | - | CX12g016081 | LOC_Os12g18450 | - | - | Detail |
| C1H4g30271 | 4:25,528,884-25,529,605 | + | C2H4g16797 | CX4g035989 | LOC_Os04g49194 | Os04g0581000 | OsSAH2 | Detail |
| C1H4g21644 | 4:25,533,632-25,535,003 | + | C2H4g02021 | CX4g035989 | LOC_Os04g49194 | Os04g0581000 | OsSAH2 | Detail |
| C1H4g27247 | 4:25,536,556-25,537,960 | - | C2H4g17595 | CX4g034941 | LOC_Os04g49210 | Os04g0581100 | OsSAH3 | Detail |
| C1H4g19809 | 4:25,548,364-25,551,428 | - | C2H4g22618 | CX4g034701 | LOC_Os04g49220 | Os04g0581300 | - | Detail |
| C1H4g26375 | 4:25,602,473-25,602,983 | - | C2H4g27357 | CX4g036477 | LOC_Os04g49260 | Os04g0581800 | - | Detail |
| C1H4g04071 | 4:25,605,130-25,609,018 | - | C2H4g21103 | CX4g033493 | LOC_Os04g49270 | Os04g0582000 | OsDNA2_12 | Detail |
| C1H4g14184 | 4:25,610,403-25,615,940 | - | C2H4g08363 | CX4g033493 | LOC_Os04g49310 | Os04g0582600 | OsDNA2_13 | Detail |
| C1H4g22667 | 4:25,617,263-25,622,773 | - | C2H4g18439 | CX4g036138 | LOC_Os04g49320 | Os04g0582700 | OsDNA2_10 | Detail |
| C1H4g13543 | 4:25,624,250-25,626,330 | - | C2H4g27939 | CX4g036138 | LOC_Os04g49340 | Os04g0582900 | OsDNA2_11 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g24113 | 6:27,085,301-27,090,904 | + | C1H6g02408 | CX6g045891 | LOC_Os06g51190 | Os06g0727700 | - | Detail |
| C2H6g26001 | 6:27,096,570-27,099,131 | + | C1H6g24428 | CX6g043291 | LOC_Os06g51200 | Os06g0727800 | - | Detail |
| C2H6g25632 | 6:27,105,009-27,106,901 | + | C1H6g17703 | CX6g043902 | LOC_Os06g51220 | Os06g0728000 | - | Detail |
| C2H6g15055 | 6:27,114,297-27,117,253 | + | C1H6g26909 | CX6g043573 | LOC_Os06g51230 | Os06g0728200 | - | Detail |
| C2H6g26917 | 6:27,125,183-27,133,287 | + | C1H6g18597 | CX6g042569 | LOC_Os06g51250 | Os06g0728600 | - | Detail |
| C2H6g16385 | 6:27,137,544-27,139,934 | - | C1H6g12115 | CX6g043553 | LOC_Os06g51260 | Os06g0728700 | - | Detail |
| C2H6g07555 | 6:27,144,950-27,160,407 | - | C1H6g02583 | CX6g042563 | LOC_Os06g51270 | Os06g0728902 | - | Detail |
| C2H6g08886 | 6:27,164,091-27,167,806 | - | C1H6g03154 | CX6g044653 | LOC_Os06g51290 | Os06g0729000 | - | Detail |
| C2H6g18155 | 6:27,177,294-27,184,959 | + | C1H6g12230 | CX6g041431 | LOC_Os06g51310 | Os06g0729300 | - | Detail |
| C2H6g07406 | 6:27,188,134-27,188,702 | + | C1H6g03228 | CX6g041257 | LOC_Os06g51320 | Os06g0729400 | - | Detail |
| C2H6g30594 | 6:27,188,902-27,194,829 | - | C1H6g31435 | CX6g041559 | LOC_Os06g51330 | Os06g0729500 | - | Detail |
| C2H6g26293 | 6:27,195,429-27,198,351 | - | C1H6g17891 | CX6g042348 | - | Os06g0729650 | - | Detail |
| C2H6g25974 | 6:27,199,318-27,200,580 | + | C1H6g03014 | CX6g044179 | LOC_Os06g51350 | - | - | Detail |
| C2H6g29787 | 6:27,203,797-27,205,681 | + | C1H6g18584 | CX6g041348 | LOC_Os06g51360 | Os06g0729900 | - | Detail |
| C2H6g16952 | 6:27,207,307-27,208,983 | + | C1H6g27052 | CX6g042493 | LOC_Os06g51370 | Os06g0730000 | - | Detail |
| C2H6g17728 | 6:27,214,430-27,217,197 | + | C1H6g12259 | CX6g044778 | LOC_Os06g51380 | Os06g0730200 | - | Detail |
| C2H6g04497 | 6:27,217,098-27,218,218 | - | - | - | - | - | - | Detail |
| C2H6g01087 | 6:27,221,535-27,223,379 | + | C1H6g13387 | CX6g041601 | LOC_Os06g51390 | Os06g0730300 | - | Detail |
| C2H6g17437 | 6:27,227,157-27,228,071 | + | C1H6g31546 | CX6g041947 | LOC_Os06g51400 | Os06g0730500 | - | Detail |
| C2H6g25487 | 6:27,229,298-27,238,781 | - | C1H6g28054 | CX6g045352 | LOC_Os06g51410 | Os06g0730600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |