| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g05653 | 4:25,086,986-25,088,838 | + | C2H4g12182 | CX4g034878 | LOC_Os04g48460 | Os04g0573900 | - | Detail |
| C1H4g04086 | 4:25,110,365-25,110,610 | - | C2H4g16583 | - | - | - | - | Detail |
| C1H4g21019 | 4:25,112,176-25,119,128 | + | - | CX4g033081 | LOC_Os04g49080 | Os04g0574500 | - | Detail |
| C1H4g09609 | 4:25,123,600-25,124,341 | + | C2H4g07929 | CX4g033081 | LOC_Os04g48510 | Os04g0574500 | - | Detail |
| C1H4g00913 | 4:25,125,803-25,133,464 | + | C2H4g08470 | CX4g033136 | LOC_Os04g48530 | Os04g0574700 | SLAC1, OsSLAC1 | Detail |
| C1H4g26247 | 4:25,133,614-25,135,630 | - | C2H4g06957 | CX4g035550 | LOC_Os04g48540 | Os04g0574800 | DHDPS1 | Detail |
| C1H4g08392 | 4:25,246,406-25,247,976 | + | - | - | LOC_Os04g48710 | Os04g0576500 | - | Detail |
| C1H4g22243 | 4:25,263,484-25,265,733 | - | C2H4g26447 | - | - | Os04g0576600 | - | Detail |
| C1H4g15551 | 4:25,279,689-25,283,017 | + | C2H4g17330 | CX4g033751 | LOC_Os04g48730 | Os04g0576700 | - | Detail |
| C1H4g16511 | 4:25,285,717-25,290,647 | + | C2H4g28918 | CX4g031926 | LOC_Os04g48750 | Os04g0576800 | - | Detail |
| C1H4g00939 | 4:25,303,694-25,306,942 | + | C2H4g02682 | CX4g032798 | LOC_Os04g48770 | Os04g0577000 | - | Detail |
| C1H4g29789 | 4:25,315,201-25,319,005 | + | C2H4g06759 | CX4g034166 | LOC_Os04g48790 | Os04g0577200 | - | Detail |
| C1H4g21419 | 4:25,319,760-25,321,256 | + | C2H4g02885 | CX4g031549 | LOC_Os04g48800 | Os04g0577300 | - | Detail |
| C1H4g20329 | 4:25,324,072-25,328,331 | - | C2H4g14499 | CX4g035442 | LOC_Os04g48820 | Os04g0577500 | - | Detail |
| C1H4g03454 | 4:25,330,345-25,331,457 | + | C2H4g16860 | CX4g034935 | LOC_Os04g48830 | Os04g0577700 | - | Detail |
| C1H4g22772 | 4:25,333,370-25,333,889 | - | C2H4g10805 | - | LOC_Os04g48840 | Os04g0577800 | - | Detail |
| C1H4g00141 | 4:25,336,398-25,336,833 | - | C2H4g05203 | CX4g036558 | LOC_Os04g48840 | Os04g0577800 | - | Detail |
| C1H4g25198 | 4:25,347,668-25,349,168 | + | - | - | - | - | - | Detail |
| C1H4g25724 | 4:25,353,782-25,355,925 | - | C2H4g06518 | CX4g036415 | LOC_Os04g48850 | Os04g0578000 | ACS2, OsACS2, Os-ACS2 | Detail |
| C1H4g24454 | 4:25,370,752-25,371,945 | + | C2H4g19030 | CX4g032177 | - | Os04g0578200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g08417 | 2:2,303,926-2,311,206 | + | C1H2g01626 | CX2g022091 | LOC_Os02g05040 | Os02g0143200 | - | Detail |
| C2H2g29044 | 2:2,326,035-2,331,705 | + | C1H2g20326 | - | - | - | - | Detail |
| C2H2g15830 | 2:2,331,756-2,337,013 | + | C1H2g05324 | CX2g020466 | LOC_Os02g05310 | Os02g0146400 | - | Detail |
| C2H2g06566 | 2:2,337,342-2,342,078 | + | C1H2g12282 | CX2g020302 | LOC_Os02g05320 | Os02g0146500 | - | Detail |
| C2H2g08642 | 2:2,344,474-2,347,835 | + | C1H2g18676 | CX2g020037 | LOC_Os02g05330 | Os02g0146600 | OseIF4A | Detail |
| C2H2g07340 | 2:2,351,364-2,359,090 | + | C1H2g28134 | CX2g019608 | LOC_Os02g05340 | Os02g0146700 | - | Detail |
| C2H2g09483 | 2:2,361,124-2,361,397 | + | - | - | - | - | - | Detail |
| C2H2g18915 | 2:2,361,453-2,365,801 | + | C1H2g16834 | CX2g022971 | LOC_Os02g05365 | Os02g0147700 | - | Detail |
| C2H2g16746 | 2:2,367,495-2,373,379 | + | C1H2g17406 | CX2g021512 | LOC_Os02g05450 | Os02g0147800 | - | Detail |
| C2H2g05031 | 2:2,385,281-2,388,231 | + | C1H2g03103 | CX2g019418 | LOC_Os02g05470 | Os02g0148000 | - | Detail |
| C2H2g17640 | 2:2,389,987-2,393,274 | - | C1H2g11400 | CX2g020633 | LOC_Os02g05480 | Os02g0148100 | OsMAPK14, OsMPK3, OsMAPK33 | Detail |
| C2H2g26711 | 2:2,398,964-2,409,479 | + | C1H2g29322 | CX2g019230 | LOC_Os02g05490 | Os02g0148300 | - | Detail |
| C2H2g18156 | 2:2,410,020-2,412,843 | + | C1H2g28836 | CX2g021446 | LOC_Os02g05500 | Os02g0148400 | - | Detail |
| C2H2g30595 | 2:2,414,221-2,417,726 | + | C1H2g30011 | CX2g024552 | LOC_Os02g05510 | Os02g0148500 | - | Detail |
| C2H2g05427 | 2:2,418,499-2,420,814 | + | C1H2g12590 | CX2g023405 | LOC_Os02g05520 | Os02g0148600 | - | Detail |
| C2H2g26407 | 2:2,427,921-2,428,679 | + | C1H2g04797 | CX2g022702 | LOC_Os02g05600 | Os02g0149500 | - | Detail |
| C2H2g19048 | 2:2,434,730-2,439,152 | + | C1H2g28291 | CX2g024920 | LOC_Os02g05610 | Os02g0149600 | - | Detail |
| C2H2g28510 | 2:2,449,680-2,452,843 | + | C1H2g12792 | CX2g021786 | LOC_Os02g05630 | Os02g0149800 | OsPP2C10, PP2C10, OsPP18 | Detail |
| C2H2g30382 | 2:2,464,142-2,465,378 | + | C1H2g24221 | CX2g022836 | LOC_Os02g05640 | Os02g0149900 | - | Detail |
| C2H2g12819 | 2:2,467,140-2,469,636 | - | C1H2g30137 | CX2g019305 | LOC_Os02g05650 | Os02g0150000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |