| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g05653 | 4:25,086,986-25,088,838 | + | C2H4g12182 | CX4g034878 | LOC_Os04g48460 | Os04g0573900 | - | Detail |
| C1H4g04086 | 4:25,110,365-25,110,610 | - | C2H4g16583 | - | - | - | - | Detail |
| C1H4g21019 | 4:25,112,176-25,119,128 | + | - | CX4g033081 | LOC_Os04g49080 | Os04g0574500 | - | Detail |
| C1H4g09609 | 4:25,123,600-25,124,341 | + | C2H4g07929 | CX4g033081 | LOC_Os04g48510 | Os04g0574500 | - | Detail |
| C1H4g00913 | 4:25,125,803-25,133,464 | + | C2H4g08470 | CX4g033136 | LOC_Os04g48530 | Os04g0574700 | SLAC1, OsSLAC1 | Detail |
| C1H4g26247 | 4:25,133,614-25,135,630 | - | C2H4g06957 | CX4g035550 | LOC_Os04g48540 | Os04g0574800 | DHDPS1 | Detail |
| C1H4g08392 | 4:25,246,406-25,247,976 | + | - | - | LOC_Os04g48710 | Os04g0576500 | - | Detail |
| C1H4g22243 | 4:25,263,484-25,265,733 | - | C2H4g26447 | - | - | Os04g0576600 | - | Detail |
| C1H4g15551 | 4:25,279,689-25,283,017 | + | C2H4g17330 | CX4g033751 | LOC_Os04g48730 | Os04g0576700 | - | Detail |
| C1H4g16511 | 4:25,285,717-25,290,647 | + | C2H4g28918 | CX4g031926 | LOC_Os04g48750 | Os04g0576800 | - | Detail |
| C1H4g00939 | 4:25,303,694-25,306,942 | + | C2H4g02682 | CX4g032798 | LOC_Os04g48770 | Os04g0577000 | - | Detail |
| C1H4g29789 | 4:25,315,201-25,319,005 | + | C2H4g06759 | CX4g034166 | LOC_Os04g48790 | Os04g0577200 | - | Detail |
| C1H4g21419 | 4:25,319,760-25,321,256 | + | C2H4g02885 | CX4g031549 | LOC_Os04g48800 | Os04g0577300 | - | Detail |
| C1H4g20329 | 4:25,324,072-25,328,331 | - | C2H4g14499 | CX4g035442 | LOC_Os04g48820 | Os04g0577500 | - | Detail |
| C1H4g03454 | 4:25,330,345-25,331,457 | + | C2H4g16860 | CX4g034935 | LOC_Os04g48830 | Os04g0577700 | - | Detail |
| C1H4g22772 | 4:25,333,370-25,333,889 | - | C2H4g10805 | - | LOC_Os04g48840 | Os04g0577800 | - | Detail |
| C1H4g00141 | 4:25,336,398-25,336,833 | - | C2H4g05203 | CX4g036558 | LOC_Os04g48840 | Os04g0577800 | - | Detail |
| C1H4g25198 | 4:25,347,668-25,349,168 | + | - | - | - | - | - | Detail |
| C1H4g25724 | 4:25,353,782-25,355,925 | - | C2H4g06518 | CX4g036415 | LOC_Os04g48850 | Os04g0578000 | ACS2, OsACS2, Os-ACS2 | Detail |
| C1H4g24454 | 4:25,370,752-25,371,945 | + | C2H4g19030 | CX4g032177 | - | Os04g0578200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H8g21066 | 8:20,294,440-20,298,567 | + | C1H8g07271 | CX8g054252 | LOC_Os08g37820 | Os08g0484800 | - | Detail |
| C2H8g02429 | 8:20,305,319-20,306,308 | - | - | - | LOC_Os08g37840 | Os08g0485000 | - | Detail |
| C2H8g11309 | 8:20,316,438-20,323,570 | + | C1H8g08354 | CX8g054237 | LOC_Os08g37874 | Os08g0485400 | - | Detail |
| C2H8g09800 | 8:20,327,851-20,328,311 | + | C1H8g24443 | CX8g050461 | LOC_Os08g37890 | Os08g0485500 | RAE2, OsEPFL1, EPFL1, GAD1 | Detail |
| C2H8g22834 | 8:20,331,886-20,337,354 | + | C1H8g08175 | CX8g054267 | LOC_Os08g37904 | Os08g0485600 | - | Detail |
| C2H8g11998 | 8:20,345,869-20,352,164 | + | C1H8g13898 | CX8g053049 | LOC_Os08g37920 | Os08g0485700 | - | Detail |
| C2H8g20917 | 8:20,353,093-20,355,855 | - | C1H8g11808 | CX8g053483 | LOC_Os08g37930 | Os08g0485800 | - | Detail |
| C2H8g01955 | 8:20,357,441-20,360,495 | - | C1H8g21083 | CX8g052013 | LOC_Os08g37940 | Os08g0485900 | - | Detail |
| C2H8g06885 | 8:20,362,408-20,370,645 | + | C1H8g12876 | CX8g054609 | LOC_Os08g37950 | Os08g0486100 | - | Detail |
| C2H8g17660 | 8:20,371,756-20,374,662 | - | C1H8g09919 | CX8g050748 | LOC_Os08g37960 | Os08g0486200 | - | Detail |
| C2H8g28570 | 8:20,383,371-20,384,904 | - | C1H8g05150 | CX8g052173 | LOC_Os08g37970 | Os08g0486300 | Os2R_MYB80 | Detail |
| C2H8g10262 | 8:20,400,922-20,401,419 | + | C1H9g18707 | CX8g052825 | LOC_Os08g37990 | Os08g0486700 | - | Detail |
| C2H8g22845 | 8:20,405,636-20,408,083 | + | C1H8g06962 | CX8g052559 | LOC_Os08g38010 | Os08g0487000 | - | Detail |
| C2H8g02123 | 8:20,410,265-20,410,954 | - | C1H8g07010 | CX8g053523 | LOC_Os08g38020 | Os08g0487100 | - | Detail |
| C2H8g17510 | 8:20,427,743-20,430,762 | - | C1H8g09056 | CX8g053173 | LOC_Os08g38060 | Os08g0487500 | - | Detail |
| C2H8g21912 | 8:20,437,235-20,439,233 | + | C1H8g03415 | CX8g054700 | LOC_Os08g38080 | Os08g0487700 | - | Detail |
| C2H8g01365 | 8:20,440,173-20,444,679 | - | C1H8g23582 | CX8g051291 | LOC_Os08g38086 | Os08g0487800 | - | Detail |
| C2H8g04096 | 8:20,445,612-20,449,097 | - | C1H8g16452 | CX8g051898 | LOC_Os08g38092 | Os08g0487900 | - | Detail |
| C2H8g24896 | 8:20,456,733-20,458,202 | + | C1H8g23496 | CX8g051261 | LOC_Os08g38110 | Os08g0489100 | - | Detail |
| C2H8g03266 | 8:20,466,541-20,467,333 | - | - | CX8g053079 | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |