| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g04331 | 4:24,813,902-24,829,102 | - | C2H4g04717 | CX4g033771 | LOC_Os04g48040 | Os04g0568850 | - | Detail |
| C1H4g22901 | 4:24,830,480-24,833,687 | - | C2H4g27476 | CX4g035675 | LOC_Os04g48050 | Os04g0568900 | OsRINGzf1 | Detail |
| C1H4g15838 | 4:24,841,495-24,844,261 | + | C2H4g06051 | CX4g036264 | LOC_Os04g48060 | Os04g0569000 | OsRFC4 | Detail |
| C1H4g17902 | 4:24,845,482-24,851,178 | - | C2H4g02683 | CX4g033862 | LOC_Os04g48070 | Os04g0569100 | ROC4, Roc4 | Detail |
| C1H4g21535 | 4:24,863,538-24,864,951 | + | C2H4g16788 | CX4g035902 | LOC_Os04g48130 | Os04g0569300 | - | Detail |
| C1H4g08980 | 4:24,865,538-24,869,670 | - | C2H4g20649 | CX4g031968 | LOC_Os04g48140 | Os04g0569400 | - | Detail |
| C1H4g04673 | 4:24,879,306-24,881,874 | - | C2H4g00953 | CX4g034977 | LOC_Os04g48160 | Os04g0569900 | - | Detail |
| C1H4g18526 | 4:24,888,945-24,892,549 | - | C2H4g17853 | CX4g033784 | LOC_Os04g48170 | Os04g0570000 | CYP87A3 | Detail |
| C1H4g29930 | 4:24,907,678-24,918,669 | - | C2H4g14427 | CX4g031367 | LOC_Os04g48200 | Os04g0570600 | - | Detail |
| C1H4g03867 | 4:24,921,785-24,925,515 | - | C2H4g06266 | CX4g033156 | LOC_Os04g48230 | Os04g0570800 | - | Detail |
| C1H4g26163 | 4:24,936,770-24,939,350 | + | C2H4g17221 | CX4g033503 | LOC_Os04g48260 | Os04g0571200 | OsSIRH2-14, OsRFPH2-14 | Detail |
| C1H4g03569 | 4:24,943,001-24,945,096 | + | C2H4g10186 | CX4g033945 | LOC_Os04g48270 | Os04g0571300 | - | Detail |
| C1H4g17435 | 4:24,981,613-24,984,266 | + | C2H4g00338 | CX4g036388 | LOC_Os04g48310 | Os04g0571800 | - | Detail |
| C1H4g03855 | 4:25,023,809-25,026,567 | + | C2H4g15443 | - | LOC_Os04g48360 | Os04g0572500 | - | Detail |
| C1H4g24679 | 4:25,030,950-25,044,639 | + | C2H4g29441 | CX4g034848 | LOC_Os04g48370 | Os04g0572600 | OsNRPD1a, OsNRPD1 | Detail |
| C1H4g25752 | 4:25,046,823-25,050,719 | + | C2H4g24575 | CX2g023056 | LOC_Os04g48375 | Os04g0572700 | - | Detail |
| C1H4g21662 | 4:25,059,513-25,066,138 | + | C2H4g30282 | CX4g034449 | LOC_Os04g48390 | Os04g0573000 | OsSPX-MFS1 | Detail |
| C1H4g12510 | 4:25,067,322-25,070,260 | + | C2H4g07007 | CX4g032073 | LOC_Os04g48400 | Os04g0573100 | HTH1 | Detail |
| C1H4g01592 | 4:25,071,498-25,075,752 | + | C2H4g10763 | CX4g035514 | LOC_Os04g48410 | Os04g0573200 | - | Detail |
| C1H4g07049 | 4:25,076,021-25,078,351 | - | C2H4g08356 | CX4g035499 | LOC_Os04g48416 | Os04g0573300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g21434 | 3:10,641,439-10,643,405 | - | C1H3g21528 | CX3g025537 | LOC_Os03g21040 | Os03g0327600 | OsEULD1b | Detail |
| C2H3g30453 | 3:10,654,783-10,655,310 | - | C1H3g10132 | CX3g025194 | LOC_Os03g17850 | Os03g0793100 | - | Detail |
| C2H3g22568 | 3:10,659,900-10,661,693 | - | C1H3g19758 | CX3g030838 | LOC_Os03g21060 | Os03g0327800 | NAC58, OsNAP, ONAC058, ONAC58, PS1 | Detail |
| C2H3g01320 | 3:10,678,060-10,692,223 | + | C1H3g10903 | CX3g029575 | LOC_Os03g21080 | Os03g0328000 | OsSPK1 | Detail |
| C2H3g29789 | 3:10,692,664-10,696,424 | - | C1H3g31035 | CX3g027049 | LOC_Os03g21090 | Os03g0328100 | - | Detail |
| C2H3g13174 | 3:10,700,149-10,701,606 | + | C1H3g04874 | CX3g029317 | LOC_Os03g21110 | Os03g0328300 | - | Detail |
| C2H3g07542 | 3:10,702,222-10,707,739 | - | C1H3g01487 | CX3g030285 | LOC_Os03g21120 | Os03g0328400 | OsAPY1 | Detail |
| C2H3g24667 | 3:10,727,333-10,731,715 | + | C1H3g07714 | CX3g028818 | LOC_Os03g21140 | Os03g0328900 | - | Detail |
| C2H3g06727 | 3:10,752,571-10,756,320 | + | C1H3g05140 | CX3g027853 | LOC_Os03g21160 | Os03g0329200 | - | Detail |
| C2H3g01256 | 3:10,771,081-10,774,744 | - | C1H3g26417 | CX3g029596 | LOC_Os03g21210 | Os03g0329500 | OsGH9A1, OsGLU1 | Detail |
| C2H3g20489 | 3:10,786,945-10,792,264 | + | C1H3g12540 | CX3g030183 | LOC_Os03g21230 | Os03g0329700 | - | Detail |
| C2H3g04364 | 3:10,795,722-10,800,922 | + | C1H3g04812 | CX3g028538 | LOC_Os03g21240 | Os03g0329900 | PHR1, OsPHR1 | Detail |
| C2H3g14604 | 3:10,803,141-10,808,363 | - | C1H3g28228 | CX3g025595 | LOC_Os03g21250 | Os03g0330000 | - | Detail |
| C2H3g27204 | 3:10,818,910-10,823,205 | + | C1H3g13172 | CX3g026436 | LOC_Os03g21260 | Os03g0330200 | - | Detail |
| C2H3g15921 | 3:10,823,679-10,830,154 | - | C1H3g07101 | CX3g027510 | LOC_Os03g21270 | Os03g0330300 | - | Detail |
| C2H3g16525 | 3:10,856,932-10,860,314 | + | C1H3g17399 | CX3g030370 | LOC_Os03g21370 | Os03g0331600 | CS3, OsLCAA | Detail |
| C2H3g29448 | 3:10,862,540-10,863,112 | - | C1H3g03324 | CX3g028976 | LOC_Os03g21380 | Os03g0331700 | - | Detail |
| C2H3g00436 | 3:10,868,264-10,869,892 | + | C1H3g28515 | CX3g026949 | LOC_Os03g21390 | Os03g0331900 | - | Detail |
| C2H3g08774 | 3:10,872,406-10,875,995 | - | C1H3g12262 | CX3g025397 | LOC_Os03g21400 | Os03g0332100 | CYP714B2 | Detail |
| C2H3g14433 | 3:10,879,666-10,880,491 | - | C1H3g15931 | CX3g025397 | LOC_Os03g21419 | Os03g0332100 | CYP714B2 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |