| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g01520 | 4:24,414,285-24,417,507 | + | C2H4g05524 | CX4g036555 | LOC_Os04g47320 | Os04g0561000 | - | Detail |
| C1H4g11046 | 4:24,419,372-24,420,162 | - | C2H4g24329 | CX4g033871 | LOC_Os04g47330 | Os04g0561200 | OsROP | Detail |
| C1H4g17483 | 4:24,425,547-24,429,715 | + | C2H4g08693 | CX4g034561 | LOC_Os04g47360 | Os04g0561500 | - | Detail |
| C1H4g22676 | 4:24,431,540-24,435,073 | + | C2H4g04530 | CX4g034510 | LOC_Os04g47370 | Os04g0561600 | - | Detail |
| C1H4g16662 | 4:24,434,744-24,439,326 | - | C2H4g06692 | CX4g035518 | LOC_Os04g47380 | Os04g0561700 | - | Detail |
| C1H4g25205 | 4:24,440,561-24,442,028 | - | C2H4g02963 | CX4g033152 | LOC_Os04g47390 | Os04g0561800 | - | Detail |
| C1H4g17277 | 4:24,446,851-24,447,263 | - | C2H4g29534 | CX4g032801 | LOC_Os04g47400 | Os04g0561900 | - | Detail |
| C1H4g22962 | 4:24,447,318-24,449,931 | - | C2H4g29534 | CX4g032801 | LOC_Os04g47400 | Os04g0561900 | - | Detail |
| C1H4g25981 | 4:24,450,921-24,456,439 | + | C2H4g11725 | CX4g034619 | LOC_Os04g47410 | Os04g0562000 | - | Detail |
| C1H4g01383 | 4:24,457,881-24,459,827 | - | C2H4g01488 | CX4g033511 | LOC_Os04g47420 | Os04g0562100 | OsLHT5 | Detail |
| C1H4g04777 | 4:24,471,281-24,472,643 | + | C2H4g15916 | - | LOC_Os04g47450 | Os04g0562500 | - | Detail |
| C1H4g29153 | 4:24,471,476-24,473,460 | - | - | CX4g034056 | - | Os04g0562650 | - | Detail |
| C1H4g07137 | 4:24,484,392-24,488,949 | + | C2H4g02352 | CX4g032344 | LOC_Os04g47480 | Os04g0562800 | - | Detail |
| C1H4g14768 | 4:24,490,651-24,494,856 | - | C2H4g30154 | CX4g031395 | LOC_Os04g47520 | Os04g0563000 | - | Detail |
| C1H4g27503 | 4:24,501,606-24,505,486 | - | C2H4g13189 | CX4g034508 | LOC_Os04g47530 | Os04g0563100 | - | Detail |
| C1H4g12075 | 4:24,505,618-24,507,841 | + | C2H4g09598 | CX4g032577 | LOC_Os04g47550 | Os04g0563300 | - | Detail |
| C1H4g30163 | 4:24,512,065-24,514,490 | - | C2H4g06274 | CX4g036609 | LOC_Os04g47580 | Os04g0563700 | - | Detail |
| C1H4g25027 | 4:24,517,017-24,533,586 | - | C2H4g20502 | CX4g036534 | LOC_Os04g47590 | Os04g0563801 | - | Detail |
| C1H4g07757 | 4:24,548,637-24,551,440 | - | C2H4g03895 | CX4g036655 | LOC_Os04g47620 | Os04g0563900 | - | Detail |
| C1H4g23508 | 4:24,558,289-24,560,442 | - | C2H4g00625 | CX4g036311 | LOC_Os04g47640 | Os04g0564000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g12160 | 2:31,977,251-31,978,025 | + | C1H2g03615 | CX2g022485 | LOC_Os02g57350 | Os02g0818900 | - | Detail |
| C2H2g13224 | 2:31,979,150-31,981,186 | + | C1H2g23220 | CX2g022485 | LOC_Os02g57360 | Os02g0819000 | - | Detail |
| C2H2g09349 | 2:32,001,094-32,003,759 | + | C1H2g05057 | CX2g023697 | LOC_Os02g57370 | Os02g0819100 | OsDHHC1 | Detail |
| C2H2g28063 | 2:32,005,507-32,006,402 | + | C1H2g03792 | CX2g018856 | LOC_Os02g53400 | Os02g0819200 | - | Detail |
| C2H2g11888 | 2:32,008,052-32,013,793 | + | C1H2g16081 | CX2g023843 | LOC_Os02g57390 | Os02g0819300 | - | Detail |
| C2H2g23556 | 2:32,014,351-32,019,166 | - | C1H2g29375 | CX2g024818 | LOC_Os02g57400 | Os02g0819400 | LPA1, OsLpa1.3, Oslpa1, Lpa1, OsLpa1 | Detail |
| C2H2g04446 | 2:32,023,238-32,028,227 | - | C1H2g01387 | CX2g019514 | LOC_Os02g57410 | Os02g0819500 | - | Detail |
| C2H2g12705 | 2:32,035,665-32,039,374 | - | C1H2g02066 | CX2g023750 | LOC_Os02g57420 | Os02g0819600 | - | Detail |
| C2H2g21639 | 2:32,044,698-32,045,991 | - | C1H2g26145 | CX2g022484 | LOC_Os02g57430 | Os02g0819700 | - | Detail |
| C2H2g10374 | 2:32,050,031-32,051,323 | + | C1H2g31294 | CX2g022770 | LOC_Os02g57440 | Os02g0819900 | - | Detail |
| C2H2g05211 | 2:32,052,563-32,056,340 | - | C1H2g00613 | CX2g019574 | LOC_Os02g57450 | Os02g0820000 | - | Detail |
| C2H2g09599 | 2:32,059,046-32,062,103 | + | C1H2g21703 | CX2g023170 | LOC_Os02g57460 | Os02g0820200 | - | Detail |
| C2H2g24658 | 2:32,063,046-32,065,515 | - | C1H2g19315 | CX2g020491 | LOC_Os02g57470 | Os02g0820300 | - | Detail |
| C2H2g13909 | 2:32,068,515-32,069,876 | - | C1H2g17511 | CX2g020751 | LOC_Os02g57480 | Os02g0820400 | - | Detail |
| C2H2g13334 | 2:32,073,929-32,074,692 | - | C1H2g27419 | CX2g023897 | LOC_Os02g57490 | Os02g0820500 | DH1, LBD16 | Detail |
| C2H2g23527 | 2:32,076,901-32,079,768 | - | C1H2g06878 | CX2g020258 | LOC_Os02g57500 | Os02g0820600 | - | Detail |
| C2H2g15378 | 2:32,080,502-32,086,118 | + | C1H2g20124 | CX2g019670 | LOC_Os02g57510 | Os02g0820700 | - | Detail |
| C2H2g25697 | 2:32,088,528-32,089,328 | + | C1H2g18462 | CX2g021426 | LOC_Os02g57520 | Os02g0820800 | PTC2 | Detail |
| C2H2g05580 | 2:32,096,925-32,101,365 | + | C1H2g08194 | CX2g022783 | LOC_Os02g57530 | Os02g0820900 | ETR3, ETR3, OsETR3, OS-ETR3, OsETR3a, OsETR3b, OsPK2, PK2, OsERS4 | Detail |
| C2H2g16075 | 2:32,102,265-32,104,185 | - | C1H2g23403 | CX2g023579 | LOC_Os02g57540 | Os02g0821200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |