| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g05524 | 4:24,078,587-24,082,819 | + | C2H4g26256 | CX4g031950 | LOC_Os04g46780 | Os04g0554200 | - | Detail |
| C1H4g29756 | 4:24,087,450-24,087,842 | + | C2H4g08626 | CX4g033498 | LOC_Os04g46810 | Os04g0554500 | OsR3L1, OsHyPRP06/R3L1, OsHyPRP06 | Detail |
| C1H4g29446 | 4:24,090,620-24,091,015 | + | C2H4g15219 | CX4g033498 | LOC_Os04g46810 | Os04g0554500 | OsR3L1, OsHyPRP06/R3L1, OsHyPRP06 | Detail |
| C1H4g22406 | 4:24,097,740-24,098,153 | + | C2H4g06180 | CX4g034369 | LOC_Os04g46830 | Os04g0554800 | - | Detail |
| C1H4g22897 | 4:24,103,734-24,104,285 | - | C2H4g00137 | CX4g035831 | LOC_Os04g46850 | Os04g0554900 | - | Detail |
| C1H4g08480 | 4:24,110,730-24,112,865 | + | C2H4g00621 | CX4g032521 | LOC_Os04g46860 | Os04g0555000 | OsHAM3 | Detail |
| C1H4g10618 | 4:24,138,324-24,141,810 | - | C2H4g19260 | CX4g032555 | LOC_Os04g46880 | Os04g0555300 | - | Detail |
| C1H4g20955 | 4:24,146,585-24,150,356 | + | C2H4g01436 | CX4g034039 | LOC_Os07g04850 | Os04g0555400 | - | Detail |
| C1H4g31360 | 4:24,150,583-24,170,537 | - | C2H4g27783 | CX4g033508 | LOC_Os04g46892 | Os04g0555600 | - | Detail |
| C1H4g07997 | 4:24,174,388-24,175,153 | - | C2H4g05762 | CX4g034295 | LOC_Os04g46910 | Os04g0555700 | - | Detail |
| C1H4g10585 | 4:24,176,299-24,178,634 | - | C2H4g18497 | CX4g034881 | LOC_Os04g46920 | Os04g0555800 | - | Detail |
| C1H4g11489 | 4:24,180,777-24,183,500 | - | C2H4g06289 | CX4g034263 | LOC_Os04g46930 | Os04g0555900 | - | Detail |
| C1H4g03272 | 4:24,186,561-24,192,372 | + | C2H4g08766 | CX4g036356 | LOC_Os04g46940 | Os04g0556000 | - | Detail |
| C1H4g30189 | 4:24,196,026-24,198,029 | + | C2H4g05648 | CX4g034227 | LOC_Os04g46960 | Os04g0556300 | - | Detail |
| C1H4g22674 | 4:24,199,083-24,204,954 | + | - | - | LOC_Os03g33570 | Os03g0448500 | - | Detail |
| C1H4g13088 | 4:24,217,160-24,218,551 | - | C2H4g24755 | CX4g033570 | LOC_Os04g46980 | Os04g0556500 | CZOGT1, OscZOGT1, cZOGT1 | Detail |
| C1H4g06970 | 4:24,228,621-24,229,994 | - | C2H4g02919 | CX4g033013 | LOC_Os04g46990 | Os04g0556600 | CZOGT2, OscZOGT2, cZOGT2 | Detail |
| C1H4g31399 | 4:24,237,315-24,239,372 | - | C2H4g05058 | CX4g036272 | LOC_Os04g47010 | Os04g0556900 | - | Detail |
| C1H4g30664 | 4:24,240,765-24,243,331 | + | C2H4g30487 | CX4g035709 | LOC_Os04g47020 | Os04g0557000 | - | Detail |
| C1H4g04431 | 4:24,256,105-24,258,066 | - | C2H4g19992 | CX4g035060 | LOC_Os04g47040 | Os04g0557200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g20138 | 4:21,074,128-21,076,094 | - | C1H4g21499 | CX4g034396 | LOC_Os04g41160 | Os04g0488700 | - | Detail |
| C2H4g16331 | 4:21,090,214-21,094,826 | - | C1H4g17621 | CX4g033270 | LOC_Os04g41200 | Os04g0489100 | - | Detail |
| C2H4g30667 | 4:21,097,406-21,098,273 | - | C1H4g14434 | CX4g036668 | - | Os04g0489200 | - | Detail |
| C2H4g29111 | 4:21,103,085-21,112,991 | + | C1H4g13969 | CX4g034720 | LOC_Os04g41229 | Os04g0489600 | OsbHLH111, OsSGI1, HBP1 | Detail |
| C2H4g26329 | 4:21,118,979-21,122,492 | + | C1H4g01937 | CX4g033639 | LOC_Os04g41250 | Os04g0489800 | RHS1 | Detail |
| C2H4g08737 | 4:21,124,232-21,132,233 | + | C1H4g19439 | CX4g032470 | LOC_Os04g41260 | Os04g0490100 | - | Detail |
| C2H4g00670 | 4:21,138,835-21,139,794 | + | C1H4g19266 | - | LOC_Os04g41280 | - | - | Detail |
| C2H4g11492 | 4:21,143,455-21,146,792 | + | C1H4g19266 | CX4g034755 | LOC_Os04g41280 | Os04g0490300 | - | Detail |
| C2H4g26467 | 4:21,147,485-21,149,945 | - | C1H4g25635 | CX4g034054 | LOC_Os04g41300 | Os04g0490400 | - | Detail |
| C2H4g17263 | 4:21,153,742-21,156,513 | + | C1H4g02046 | CX4g036414 | LOC_Os04g41310 | Os04g0490500 | - | Detail |
| C2H4g06465 | 4:21,156,771-21,162,890 | - | C1H4g27608 | CX4g031476 | LOC_Os04g41320 | Os04g0490600 | - | Detail |
| C2H4g14336 | 4:21,171,396-21,173,378 | + | - | CX4g035361 | LOC_Os04g41330 | Os04g0490700 | - | Detail |
| C2H4g18442 | 4:21,173,890-21,176,469 | - | C1H4g22577 | CX4g031967 | LOC_Os04g41340 | Os04g0490800 | OsPGLP1 | Detail |
| C2H4g17626 | 4:21,180,461-21,182,268 | + | C1H4g24056 | CX4g036249 | LOC_Os04g41350 | Os04g0490900 | - | Detail |
| C2H4g02527 | 4:21,187,902-21,190,658 | + | C1H4g30101 | CX4g033718 | LOC_Os04g41380 | Os04g0491100 | - | Detail |
| C2H4g11306 | 4:21,193,349-21,200,488 | - | C1H4g24917 | CX4g035441 | LOC_Os04g41400 | Os04g0491500 | - | Detail |
| C2H4g18826 | 4:21,207,246-21,210,326 | - | C1H4g15315 | CX4g036387 | LOC_Os04g41450 | Os04g0491500 | - | Detail |
| C2H4g07651 | 4:21,211,932-21,216,391 | - | C1H4g21111 | CX4g035327 | LOC_Os04g41460 | Os04g0491700 | OsINT1 | Detail |
| C2H4g12997 | 4:21,223,394-21,230,605 | + | C1H4g17364 | CX4g033387 | LOC_Os04g41470 | Os04g0492100 | - | Detail |
| C2H4g29458 | 4:21,234,162-21,245,817 | + | C1H4g17746 | CX4g034732 | LOC_Os04g41490 | Os04g0492300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |