| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g05524 | 4:24,078,587-24,082,819 | + | C2H4g26256 | CX4g031950 | LOC_Os04g46780 | Os04g0554200 | - | Detail |
| C1H4g29756 | 4:24,087,450-24,087,842 | + | C2H4g08626 | CX4g033498 | LOC_Os04g46810 | Os04g0554500 | OsR3L1, OsHyPRP06/R3L1, OsHyPRP06 | Detail |
| C1H4g29446 | 4:24,090,620-24,091,015 | + | C2H4g15219 | CX4g033498 | LOC_Os04g46810 | Os04g0554500 | OsR3L1, OsHyPRP06/R3L1, OsHyPRP06 | Detail |
| C1H4g22406 | 4:24,097,740-24,098,153 | + | C2H4g06180 | CX4g034369 | LOC_Os04g46830 | Os04g0554800 | - | Detail |
| C1H4g22897 | 4:24,103,734-24,104,285 | - | C2H4g00137 | CX4g035831 | LOC_Os04g46850 | Os04g0554900 | - | Detail |
| C1H4g08480 | 4:24,110,730-24,112,865 | + | C2H4g00621 | CX4g032521 | LOC_Os04g46860 | Os04g0555000 | OsHAM3 | Detail |
| C1H4g10618 | 4:24,138,324-24,141,810 | - | C2H4g19260 | CX4g032555 | LOC_Os04g46880 | Os04g0555300 | - | Detail |
| C1H4g20955 | 4:24,146,585-24,150,356 | + | C2H4g01436 | CX4g034039 | LOC_Os07g04850 | Os04g0555400 | - | Detail |
| C1H4g31360 | 4:24,150,583-24,170,537 | - | C2H4g27783 | CX4g033508 | LOC_Os04g46892 | Os04g0555600 | - | Detail |
| C1H4g07997 | 4:24,174,388-24,175,153 | - | C2H4g05762 | CX4g034295 | LOC_Os04g46910 | Os04g0555700 | - | Detail |
| C1H4g10585 | 4:24,176,299-24,178,634 | - | C2H4g18497 | CX4g034881 | LOC_Os04g46920 | Os04g0555800 | - | Detail |
| C1H4g11489 | 4:24,180,777-24,183,500 | - | C2H4g06289 | CX4g034263 | LOC_Os04g46930 | Os04g0555900 | - | Detail |
| C1H4g03272 | 4:24,186,561-24,192,372 | + | C2H4g08766 | CX4g036356 | LOC_Os04g46940 | Os04g0556000 | - | Detail |
| C1H4g30189 | 4:24,196,026-24,198,029 | + | C2H4g05648 | CX4g034227 | LOC_Os04g46960 | Os04g0556300 | - | Detail |
| C1H4g22674 | 4:24,199,083-24,204,954 | + | - | - | LOC_Os03g33570 | Os03g0448500 | - | Detail |
| C1H4g13088 | 4:24,217,160-24,218,551 | - | C2H4g24755 | CX4g033570 | LOC_Os04g46980 | Os04g0556500 | CZOGT1, OscZOGT1, cZOGT1 | Detail |
| C1H4g06970 | 4:24,228,621-24,229,994 | - | C2H4g02919 | CX4g033013 | LOC_Os04g46990 | Os04g0556600 | CZOGT2, OscZOGT2, cZOGT2 | Detail |
| C1H4g31399 | 4:24,237,315-24,239,372 | - | C2H4g05058 | CX4g036272 | LOC_Os04g47010 | Os04g0556900 | - | Detail |
| C1H4g30664 | 4:24,240,765-24,243,331 | + | C2H4g30487 | CX4g035709 | LOC_Os04g47020 | Os04g0557000 | - | Detail |
| C1H4g04431 | 4:24,256,105-24,258,066 | - | C2H4g19992 | CX4g035060 | LOC_Os04g47040 | Os04g0557200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g18980 | 6:13,442,978-13,443,914 | - | C1H6g05186 | CX6g044280 | LOC_Os06g25950 | Os06g0364500 | - | Detail |
| C2H6g21115 | 6:13,458,208-13,458,561 | + | C1H6g21743 | CX6g043831 | - | - | - | Detail |
| C2H6g15255 | 6:13,468,327-13,468,566 | - | - | - | - | - | - | Detail |
| C2H6g17805 | 6:13,516,222-13,517,160 | + | - | - | LOC_Os06g28300 | - | - | Detail |
| C2H6g05138 | 6:13,560,858-13,561,576 | + | C1H6g02594 | CX6g044189 | LOC_Os01g09320 | Os01g0188400 | - | Detail |
| C2H6g06829 | 6:13,590,466-13,594,003 | + | C1H6g24414 | CX3g025839 | LOC_Os03g11490 | Os03g0213600 | - | Detail |
| C2H6g26811 | 6:13,597,196-13,597,660 | - | - | - | - | - | - | Detail |
| C2H6g03737 | 6:13,598,781-13,603,395 | + | C1H6g08979 | CX6g041898 | LOC_Os06g25470 | - | - | Detail |
| C2H6g28762 | 6:13,605,943-13,606,221 | + | - | CX6g045976 | LOC_Os06g25460 | - | - | Detail |
| C2H6g11655 | 6:13,606,327-13,611,414 | - | C1H6g08345 | CX6g045318 | - | - | - | Detail |
| C2H6g07520 | 6:13,612,676-13,613,240 | + | C1H6g04499 | CX6g044019 | - | Os06g0360300 | - | Detail |
| C2H6g21208 | 6:13,623,751-13,625,546 | + | C1H6g23788 | CX6g042362 | LOC_Os06g25439 | Os06g0360300 | - | Detail |
| C2H6g12171 | 6:13,687,101-13,687,304 | - | - | - | - | - | - | Detail |
| C2H6g28961 | 6:13,688,013-13,692,790 | + | - | - | - | - | - | Detail |
| C2H6g15929 | 6:13,701,075-13,702,445 | + | C1H6g01270 | CX6g045429 | LOC_Os06g25294 | Os06g0359400 | - | Detail |
| C2H6g13221 | 6:13,791,560-13,799,939 | - | C1H6g13854 | CX6g043468 | LOC_Os06g25250 | Os06g0358800 | - | Detail |
| C2H6g25489 | 6:13,929,465-13,930,358 | + | - | CX6g045238 | LOC_Os06g25010 | Os06g0356800 | - | Detail |
| C2H6g09220 | 6:13,932,986-13,935,443 | + | - | - | LOC_Os06g24750 | - | - | Detail |
| C2H6g29551 | 6:13,941,361-13,946,069 | - | C1H6g21464 | CX6g044053 | LOC_Os06g24730 | Os06g0354700 | - | Detail |
| C2H6g10356 | 6:13,958,883-13,967,627 | + | C1H6g21270 | CX6g041646 | LOC_Os06g24704 | Os06g0354500 | OsACX3 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |