| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g03988 | 4:23,736,502-23,739,345 | + | C2H4g11468 | CX4g034379 | LOC_Os04g46190 | Os04g0546400 | - | Detail |
| C1H4g13285 | 4:23,741,114-23,741,563 | - | C2H4g20213 | - | LOC_Os04g46200 | Os04g0546500 | - | Detail |
| C1H4g07196 | 4:23,746,079-23,747,023 | - | C2H4g09322 | CX4g033590 | LOC_Os04g46220 | Os04g0546800 | OsERF1 | Detail |
| C1H4g12019 | 4:23,758,352-23,758,552 | - | C2H4g18934 | - | LOC_Os02g44030 | - | - | Detail |
| C1H4g29173 | 4:23,758,641-23,759,192 | - | - | - | - | - | - | Detail |
| C1H4g12670 | 4:23,818,239-23,821,336 | + | C2H4g18179 | CX4g034183 | LOC_Os04g46280 | Os04g0547900 | - | Detail |
| C1H4g10052 | 4:23,821,907-23,824,972 | + | C2H4g14899 | CX4g033458 | LOC_Os04g46290 | Os04g0548000 | - | Detail |
| C1H4g04798 | 4:23,841,980-23,857,224 | + | C2H4g03565 | CX4g035683 | LOC_Os04g46310 | Os04g0548300 | - | Detail |
| C1H4g12131 | 4:23,859,140-23,861,482 | - | C2H4g11033 | CX4g032840 | LOC_Os04g46320 | Os04g0548400 | - | Detail |
| C1H4g26382 | 4:23,873,000-23,874,208 | - | C2H4g19703 | CX4g034670 | LOC_Os04g46350 | Os04g0548700 | - | Detail |
| C1H4g18543 | 4:23,886,458-23,889,886 | - | C2H4g12477 | CX4g032819 | LOC_Os04g46370 | Os04g0549300 | - | Detail |
| C1H4g06939 | 4:23,889,533-23,890,489 | + | C2H4g23802 | CX4g034583 | LOC_Os04g46380 | Os04g0549400 | - | Detail |
| C1H4g13580 | 4:23,896,703-23,898,456 | + | C2H4g16012 | CX4g033131 | LOC_Os04g46384 | Os04g0549500 | Os2R_MYB49 | Detail |
| C1H4g09321 | 4:23,899,807-23,904,314 | + | C2H4g10744 | CX4g031909 | LOC_Os04g46390 | Os04g0549600 | - | Detail |
| C1H4g25073 | 4:23,930,843-23,931,288 | - | C2H4g18020 | - | - | - | - | Detail |
| C1H4g24190 | 4:23,941,405-23,950,000 | - | C2H4g27792 | CX4g034813 | LOC_Os04g46450 | Os04g0550400 | OsHUB1, HUB1 | Detail |
| C1H4g17634 | 4:23,957,821-23,960,475 | + | C2H4g04395 | CX4g034240 | LOC_Os04g46470 | Os04g0550600 | HTD1, OsCCD7, D17 | Detail |
| C1H4g11880 | 4:23,960,806-23,962,612 | - | C2H4g05787 | CX4g034920 | LOC_Os04g46480 | Os04g0550700 | - | Detail |
| C1H4g31862 | 4:23,965,777-23,966,896 | - | C2H4g01885 | CX4g034128 | LOC_Os04g46490 | Os04g0550800 | - | Detail |
| C1H4g15457 | 4:23,967,238-23,968,176 | - | C2H4g17694 | CX4g034482 | LOC_Os04g46530 | Os04g0550900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g03514 | 4:29,448,149-29,448,868 | - | C1H4g29276 | CX4g031690 | LOC_Os04g57180 | Os04g0667400 | M2H, 2-ODD 21 | Detail |
| C2H4g20638 | 4:29,453,004-29,455,947 | - | C1H4g19147 | CX4g033675 | LOC_Os04g57190 | Os04g0667500 | - | Detail |
| C2H4g07967 | 4:29,465,585-29,468,272 | - | C1H4g19147 | CX4g033675 | LOC_Os04g57190 | Os04g0667500 | - | Detail |
| C2H4g26737 | 4:29,471,984-29,473,277 | + | C1H4g27331 | CX4g035023 | LOC_Os04g57200 | Os04g0667600 | OsHIPP24 | Detail |
| C2H4g18780 | 4:29,474,576-29,478,577 | + | C1H4g25251 | CX4g032489 | LOC_Os04g57210 | Os04g0667700 | - | Detail |
| C2H4g23930 | 4:29,479,590-29,481,940 | - | C1H4g10442 | CX4g035437 | LOC_Os04g57220 | Os04g0667800 | - | Detail |
| C2H4g04165 | 4:29,483,130-29,486,877 | + | C1H4g01418 | CX4g031421 | LOC_Os04g57230 | Os04g0667900 | - | Detail |
| C2H4g19726 | 4:29,493,719-29,493,928 | - | - | CX4g032599 | LOC_Os04g57280 | - | - | Detail |
| C2H4g12154 | 4:29,496,010-29,497,272 | + | C1H4g14062 | CX4g035483 | LOC_Os04g57290 | Os04g0668600 | - | Detail |
| C2H4g10729 | 4:29,500,106-29,501,983 | - | - | CX4g031851 | LOC_Os04g57300 | Os04g0668700 | - | Detail |
| C2H4g24314 | 4:29,504,815-29,508,179 | + | C1H4g07320 | CX4g033794 | LOC_Os04g57310 | Os04g0668800 | - | Detail |
| C2H4g10649 | 4:29,508,269-29,511,441 | - | C1H4g11017 | CX4g035618 | LOC_Os04g57320 | Os04g0668900 | IM1, OsIM1, OsIM1a, OsIM2, OsIM, PTOX1 | Detail |
| C2H4g23402 | 4:29,513,570-29,515,132 | - | C1H4g09478 | CX4g035266 | LOC_Os04g57330 | Os04g0669100 | - | Detail |
| C2H4g26783 | 4:29,517,880-29,518,455 | - | C1H4g01273 | CX4g032933 | LOC_Os04g57340 | Os04g0669200 | - | Detail |
| C2H4g26457 | 4:29,521,567-29,524,942 | + | C1H4g10679 | CX4g033726 | LOC_Os04g57350 | Os04g0669300 | - | Detail |
| C2H4g10159 | 4:29,525,812-29,526,486 | + | - | CX4g032922 | LOC_Os04g57360 | Os04g0669475 | - | Detail |
| C2H4g05368 | 4:29,531,719-29,534,324 | - | C1H4g10307 | CX4g034719 | LOC_Os04g57370 | Os04g0669500 | - | Detail |
| C2H4g28278 | 4:29,534,703-29,536,222 | - | C1H4g20800 | CX4g032862 | LOC_Os04g57380 | Os04g0669600 | - | Detail |
| C2H4g09192 | 4:29,536,981-29,540,198 | - | C1H4g20558 | CX4g032503 | LOC_Os04g57400 | Os04g0669800 | - | Detail |
| C2H4g18679 | 4:29,542,726-29,545,857 | - | C1H4g00350 | CX4g034572 | LOC_Os04g57410 | Os04g0669900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |