| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g10769 | 4:23,395,396-23,401,153 | - | C2H4g12110 | CX4g032688 | LOC_Os04g45580 | Os04g0538800 | - | Detail |
| C1H4g30025 | 4:23,406,939-23,407,746 | + | C2H4g10511 | - | LOC_Os04g45590 | Os04g0538900 | - | Detail |
| C1H4g16905 | 4:23,409,931-23,411,211 | + | C2H4g20122 | - | LOC_Os04g45600 | Os04g0539000 | - | Detail |
| C1H4g23975 | 4:23,411,847-23,415,025 | - | C2H4g25192 | CX4g032029 | LOC_Os04g45610 | Os04g0539100 | - | Detail |
| C1H4g17088 | 4:23,418,016-23,419,742 | - | C2H4g19707 | CX4g035647 | LOC_Os04g45630 | Os04g0539300 | - | Detail |
| C1H4g04536 | 4:23,428,238-23,430,862 | + | C2H4g18724 | CX4g033248 | LOC_Os04g45650 | Os04g0539500 | - | Detail |
| C1H4g13934 | 4:23,439,744-23,444,182 | - | C2H4g04312 | CX4g035492 | LOC_Os04g45670 | Os04g0539800 | - | Detail |
| C1H4g18759 | 4:23,451,256-23,452,965 | + | C2H4g29647 | CX4g031384 | LOC_Os04g45690 | Os04g0540200 | OsRIP1 | Detail |
| C1H4g25286 | 4:23,456,657-23,457,743 | + | C2H4g20715 | CX4g033676 | LOC_Os04g45700 | Os04g0540300 | - | Detail |
| C1H4g30808 | 4:23,457,814-23,458,674 | + | C2H4g20715 | CX4g033676 | LOC_Os04g45700 | Os04g0540300 | - | Detail |
| C1H4g25127 | 4:23,459,270-23,463,777 | - | C2H4g10305 | CX4g033064 | LOC_Os04g45720 | Os04g0540600 | - | Detail |
| C1H4g14597 | 4:23,468,787-23,470,455 | - | C2H4g09606 | CX4g036212 | LOC_Os04g45730 | Os04g0540900 | STRK1 | Detail |
| C1H4g08827 | 4:23,489,288-23,493,567 | - | C2H4g10705 | CX4g035032 | LOC_Os04g45750 | Os04g0541100 | - | Detail |
| C1H4g08954 | 4:23,512,752-23,520,292 | + | C2H4g12357 | CX4g033606 | LOC_Os04g45800 | Os04g0541500 | OsLCBK2 | Detail |
| C1H4g13532 | 4:23,524,551-23,525,490 | + | C2H4g17090 | CX4g034688 | LOC_Os04g45810 | Os04g0541700 | HOX22, Oshox22, OsHox22 | Detail |
| C1H4g31215 | 4:23,537,702-23,540,321 | + | C2H4g16789 | CX4g031805 | LOC_Os04g45821 | Os04g0541900 | - | Detail |
| C1H4g01207 | 4:23,550,168-23,553,637 | - | C2H4g15215 | CX4g036589 | LOC_Os04g45860 | Os04g0542200 | - | Detail |
| C1H4g26797 | 4:23,567,628-23,571,774 | - | C2H4g05921 | CX4g034574 | LOC_Os04g45900 | Os04g0542800 | YSL16, OsYSL16, Os-YSL16, OsYs14 | Detail |
| C1H4g00917 | 4:23,580,070-23,583,432 | + | C2H4g03772 | CX4g031872 | LOC_Os04g45910 | Os04g0542900 | - | Detail |
| C1H4g12022 | 4:23,583,743-23,585,388 | - | C2H4g18044 | CX4g033127 | LOC_Os04g45920 | Os04g0543000 | OsRLCK155 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H12g11770 | 12:20,459,286-20,462,355 | - | C1H12g02422 | CX12g017218 | LOC_Os12g39840 | Os12g0588900 | - | Detail |
| C2H12g17897 | 12:20,463,904-20,465,193 | - | C1H12g17096 | CX12g015266 | LOC_Os12g39850 | Os12g0589000 | - | Detail |
| C2H12g10785 | 12:20,468,520-20,471,272 | - | C1H12g02999 | CX12g016824 | LOC_Os12g39860 | Os12g0589100 | - | Detail |
| C2H12g01301 | 12:20,480,052-20,483,787 | - | C1H12g08134 | CX12g016691 | LOC_Os12g39880 | Os12g0589400 | HSA1a, HSA1a-j | Detail |
| C2H12g28784 | 12:20,485,123-20,498,697 | - | C1H12g30872 | CX12g017316 | LOC_Os12g39980 | Os12g0590500 | - | Detail |
| C2H12g29454 | 12:20,523,858-20,526,581 | + | C1H12g16823 | CX12g015538 | LOC_Os12g40010 | Os12g0590900 | - | Detail |
| C2H12g06167 | 12:20,529,596-20,532,442 | + | C1H12g31856 | CX12g018693 | LOC_Os12g40070 | Os12g0591300 | - | Detail |
| C2H12g30240 | 12:20,534,738-20,537,031 | + | C1H12g03293 | CX12g018074 | LOC_Os12g40080 | Os12g0591500 | - | Detail |
| C2H12g24797 | 12:20,538,390-20,540,071 | + | C1H12g01393 | CX12g018074 | LOC_Os12g40090 | Os12g0592300 | - | Detail |
| C2H12g28728 | 12:20,543,028-20,547,380 | - | C1H12g09353 | CX12g018032 | LOC_Os12g40100 | Os12g0591600 | - | Detail |
| C2H12g29696 | 12:20,548,078-20,549,358 | - | C1H12g06074 | CX12g015467 | LOC_Os12g39640 | Os12g0105600 | - | Detail |
| C2H12g28851 | 12:20,567,501-20,567,910 | + | C1H12g12178 | CX12g018307 | LOC_Os12g40115 | Os12g0592200 | - | Detail |
| C2H12g02463 | 12:20,570,630-20,572,616 | - | C1H12g20575 | CX12g018221 | LOC_Os12g40120 | Os12g0592300 | - | Detail |
| C2H12g08205 | 12:20,573,752-20,575,137 | + | C1H12g10967 | CX12g018529 | LOC_Os12g40130 | Os12g0592400 | - | Detail |
| C2H12g17008 | 12:20,575,802-20,578,521 | + | C1H12g11827 | CX12g016602 | LOC_Os12g40140 | Os12g0592500 | - | Detail |
| C2H12g03819 | 12:20,602,829-20,603,428 | + | C1H12g19402 | CX12g018675 | LOC_Os12g40180 | Os12g0592900 | - | Detail |
| C2H12g06295 | 12:20,603,801-20,608,692 | - | C1H12g09301 | CX12g018708 | LOC_Os12g40190 | Os12g0593000 | OsXLG4 | Detail |
| C2H12g01463 | 12:20,614,184-20,614,972 | - | C1H12g09301 | CX12g018708 | LOC_Os12g40190 | Os12g0593000 | OsXLG4 | Detail |
| C2H12g14389 | 12:20,621,260-20,622,600 | - | C1H2g04140 | CX12g017783 | - | - | - | Detail |
| C2H12g24806 | 12:20,624,679-20,625,026 | + | C1H12g08989 | - | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |