| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g20746 | 4:22,729,779-22,730,441 | - | C2H4g23320 | CX4g035905 | LOC_Os04g44150 | Os04g0522500 | GA2ox6, OsGA2ox6 | Detail |
| C1H4g23550 | 4:22,748,829-22,751,862 | + | C2H4g07715 | CX4g032754 | LOC_Os04g44190 | Os04g0522800 | - | Detail |
| C1H4g25974 | 4:22,753,275-22,753,924 | + | C2H4g09820 | CX4g032876 | LOC_Os04g44200 | Os04g0523000 | - | Detail |
| C1H4g18322 | 4:22,754,033-22,758,861 | - | C2H4g17435 | CX4g032188 | LOC_Os04g44210 | Os04g0523100 | - | Detail |
| C1H4g27685 | 4:22,765,846-22,768,184 | - | C2H4g30482 | CX4g033622 | LOC_Os04g44220 | Os04g0523200 | - | Detail |
| C1H4g26193 | 4:22,769,718-22,770,356 | - | C2H4g08365 | CX4g033622 | LOC_Os04g44220 | Os04g0523350 | - | Detail |
| C1H4g02749 | 4:22,779,569-22,781,998 | + | C2H4g21642 | CX4g033677 | LOC_Os04g44230 | Os04g0523500 | OsCKX8 | Detail |
| C1H4g06045 | 4:22,783,910-22,784,748 | + | C2H4g21642 | CX4g033677 | LOC_Os04g44230 | Os04g0523500 | OsCKX8 | Detail |
| C1H4g20304 | 4:22,814,243-22,815,036 | + | C2H4g21424 | CX4g035143 | LOC_Os04g44280 | Os04g0524300 | RR5, rr5, OsRR5, Rra4, OsRRA4 | Detail |
| C1H4g10194 | 4:22,819,581-22,821,969 | + | C2H4g00588 | CX4g034041 | LOC_Os04g44290 | Os04g0524400 | - | Detail |
| C1H4g06080 | 4:22,823,502-22,827,603 | - | C2H4g16476 | CX4g031624 | LOC_Os04g44300 | Os04g0524500 | - | Detail |
| C1H4g31583 | 4:22,830,776-22,835,825 | + | C2H4g24580 | CX4g031624 | LOC_Os04g44320 | Os04g0524600 | - | Detail |
| C1H4g03289 | 4:22,838,767-22,841,732 | + | C2H4g13558 | CX4g035938 | LOC_Os04g44330 | Os04g0524900 | - | Detail |
| C1H4g04192 | 4:22,842,384-22,842,785 | - | C2H4g06209 | CX4g032796 | - | Os04g0524950 | - | Detail |
| C1H4g13077 | 4:22,843,251-22,845,077 | - | C2H4g24635 | CX4g036453 | LOC_Os04g44340 | Os04g0525000 | - | Detail |
| C1H4g11662 | 4:22,845,800-22,852,759 | - | C2H4g03449 | CX4g034629 | LOC_Os04g44354 | Os04g0525100 | - | Detail |
| C1H4g29555 | 4:22,861,129-22,866,307 | - | C2H4g02519 | CX4g035890 | LOC_Os04g44410 | Os04g0525700 | - | Detail |
| C1H4g21652 | 4:22,873,434-22,881,820 | + | C2H4g01154 | CX4g035136 | LOC_Os04g44430 | Os04g0525900 | - | Detail |
| C1H4g10699 | 4:22,889,186-22,893,128 | + | C2H4g30395 | CX4g035210 | - | Os04g0526200 | - | Detail |
| C1H4g09431 | 4:22,903,840-22,904,770 | - | C2H4g08104 | CX4g035727 | LOC_Os04g44500 | Os04g0526800 | OsABAR1 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g22211 | 3:7,055,828-7,058,969 | - | C1H3g08518 | CX3g027601 | LOC_Os03g14700 | Os03g0251600 | OsC2DP29 | Detail |
| C2H3g23862 | 3:7,062,815-7,066,933 | + | C1H3g13884 | CX3g025283 | LOC_Os03g14710 | Os03g0251700 | - | Detail |
| C2H3g08409 | 3:7,067,858-7,071,435 | - | C1H3g19434 | CX3g029065 | LOC_Os03g14720 | - | - | Detail |
| C2H3g07197 | 3:7,072,121-7,072,672 | - | C1H3g22396 | CX3g030425 | - | - | - | Detail |
| C2H3g07863 | 3:7,076,919-7,077,896 | - | C1H3g11496 | CX3g028408 | LOC_Os03g14730 | Os03g0252100 | DIP12, OsDIP12 | Detail |
| C2H3g26743 | 3:7,094,528-7,095,132 | - | C1H3g17355 | CX3g030146 | - | Os03g0672900 | OsXYN1, OsXyn1 | Detail |
| C2H3g25791 | 3:7,095,211-7,095,489 | - | - | - | - | - | - | Detail |
| C2H3g09632 | 3:7,097,084-7,097,810 | + | C1H3g20834 | CX3g025353 | LOC_Os03g14790 | - | - | Detail |
| C2H3g26671 | 3:7,098,308-7,101,922 | + | C1H3g27328 | CX3g025353 | LOC_Os03g14790 | Os03g0682200 | - | Detail |
| C2H3g27873 | 3:7,103,867-7,109,162 | - | C1H3g10342 | CX3g029321 | LOC_Os03g14800 | Os03g0252800 | - | Detail |
| C2H3g05415 | 3:7,113,624-7,114,199 | - | C1H3g03427 | CX3g026810 | LOC_Os03g14810 | Os03g0252900 | - | Detail |
| C2H3g20389 | 3:7,120,225-7,125,934 | - | C1H3g13989 | CX3g025241 | - | Os03g0253100 | - | Detail |
| C2H3g29944 | 3:7,134,478-7,136,007 | + | C1H3g21796 | CX3g029104 | LOC_Os03g14840 | Os03g0253200 | - | Detail |
| C2H3g07742 | 3:7,149,123-7,150,428 | - | C1H3g30447 | CX3g029003 | LOC_Os03g14860 | Os03g0253500 | - | Detail |
| C2H3g06446 | 3:7,157,043-7,158,059 | - | C1H3g10348 | CX3g028867 | LOC_Os03g14880 | Os03g0253600 | - | Detail |
| C2H3g06821 | 3:7,163,212-7,168,316 | - | C1H3g02049 | - | LOC_Os03g14890 | Os03g0253800 | - | Detail |
| C2H3g12053 | 3:7,170,891-7,174,720 | - | C1H3g17610 | CX3g029243 | LOC_Os03g14900 | Os03g0254000 | - | Detail |
| C2H3g13183 | 3:7,177,515-7,178,305 | + | - | - | - | - | - | Detail |
| C2H3g19284 | 3:7,181,393-7,185,027 | + | C1H3g15353 | CX3g028413 | LOC_Os03g14910 | Os03g0254200 | - | Detail |
| C2H3g17074 | 3:7,185,689-7,186,792 | + | C1H3g13729 | CX3g025235 | LOC_Os03g14915 | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |