| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g10053 | 4:22,556,566-22,561,222 | - | C2H4g00297 | CX4g034783 | LOC_Os04g43690 | Os04g0517300 | - | Detail |
| C1H4g19364 | 4:22,561,456-22,566,949 | + | C2H4g03267 | CX4g034365 | LOC_Os04g43700 | Os04g0517400 | - | Detail |
| C1H4g27983 | 4:22,570,379-22,571,379 | + | C2H4g18098 | CX4g036341 | LOC_Os04g43710 | Os04g0517500 | - | Detail |
| C1H4g02633 | 4:22,575,097-22,578,375 | - | C2H4g25250 | CX4g031725 | LOC_Os04g43730 | Os04g0517700 | - | Detail |
| C1H4g21239 | 4:22,584,597-22,588,168 | - | C2H4g18845 | CX4g032795 | LOC_Os04g43750 | Os04g0518000 | - | Detail |
| C1H4g17678 | 4:22,592,726-22,595,712 | - | C2H4g17450 | CX4g031424 | LOC_Os04g43760 | Os04g0518100 | - | Detail |
| C1H4g22637 | 4:22,601,648-22,604,291 | - | C2H4g28869 | CX4g031711 | LOC_Os04g43800 | Os04g0518400 | OsPAL6 | Detail |
| C1H4g07857 | 4:22,612,924-22,615,739 | - | C2H4g10523 | - | LOC_Os04g43824 | Os04g0518650 | - | Detail |
| C1H4g21094 | 4:22,624,582-22,628,348 | + | C2H4g12982 | CX4g035278 | LOC_Os04g43840 | Os04g0518800 | LABA1, LOGL6, OsLOGL6, An-2 | Detail |
| C1H4g30028 | 4:22,643,421-22,646,106 | + | C2H4g03913 | CX4g031681 | LOC_Os04g43910 | Os04g0519700 | ARF10, qSE4 | Detail |
| C1H4g09015 | 4:22,653,208-22,664,875 | - | C2H4g13261 | CX4g033896 | LOC_Os04g43916 | Os04g0519900 | - | Detail |
| C1H4g07978 | 4:22,665,750-22,670,307 | - | C2H4g00328 | CX4g033084 | LOC_Os04g43922 | Os04g0520000 | - | Detail |
| C1H4g29455 | 4:22,690,768-22,692,591 | + | C2H4g13133 | CX4g032514 | LOC_Os04g44060 | Os04g0521100 | OsPIP2;3 | Detail |
| C1H4g20974 | 4:22,693,342-22,693,635 | - | C2H4g21649 | - | - | - | - | Detail |
| C1H4g01962 | 4:22,693,922-22,694,944 | - | C2H4g30421 | - | - | - | - | Detail |
| C1H4g05956 | 4:22,697,067-22,697,330 | + | C2H4g17426 | CX4g034857 | LOC_Os04g44070 | Os04g0521300 | - | Detail |
| C1H4g04229 | 4:22,700,018-22,702,759 | + | C2H4g25112 | CX4g032134 | LOC_Os04g44090 | Os04g0521600 | - | Detail |
| C1H4g14520 | 4:22,706,368-22,709,546 | + | C2H4g19435 | CX4g031957 | LOC_Os04g44110 | Os04g0521800 | - | Detail |
| C1H4g13540 | 4:22,711,689-22,712,061 | + | C2H4g20077 | CX4g034351 | LOC_Os04g44130 | Os04g0522100 | CAL2 | Detail |
| C1H4g14130 | 4:22,727,345-22,728,093 | - | C2H4g17950 | CX4g035905 | LOC_Os04g44150 | Os04g0522500 | GA2ox6, OsGA2ox6 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g15394 | 2:21,291,137-21,291,944 | - | C1H2g22092 | CX2g020664 | LOC_Os02g37380 | Os02g0586000 | - | Detail |
| C2H2g24649 | 2:21,317,981-21,320,122 | + | C1H2g31494 | CX2g024018 | LOC_Os02g37420 | Os02g0586400 | - | Detail |
| C2H2g17228 | 2:21,332,608-21,333,610 | + | C1H2g31481 | CX2g023618 | LOC_Os02g37470 | Os02g0586800 | OsFLU2 | Detail |
| C2H2g21522 | 2:21,336,382-21,336,784 | + | C1H2g14197 | CX2g019987 | LOC_Os02g37480 | Os02g0586900 | - | Detail |
| C2H2g03064 | 2:21,340,306-21,340,791 | + | C1H2g04748 | CX2g020038 | LOC_Os02g37490 | Os02g0587000 | - | Detail |
| C2H2g05090 | 2:21,347,146-21,347,460 | + | C1H2g19717 | CX2g023388 | LOC_Os02g37500 | Os02g0587300 | - | Detail |
| C2H2g18761 | 2:21,355,021-21,355,695 | + | C1H2g02638 | CX2g024629 | LOC_Os02g37520 | Os02g0587600 | - | Detail |
| C2H2g22240 | 2:21,360,650-21,361,277 | + | C1H2g31221 | CX2g020720 | LOC_Os02g37540 | Os02g0587800 | - | Detail |
| C2H2g22872 | 2:21,372,279-21,372,900 | + | C1H2g22421 | CX2g021682 | LOC_Os02g37550 | Os02g0587300 | - | Detail |
| C2H2g02334 | 2:21,379,339-21,384,386 | - | C1H2g14707 | CX2g021381 | LOC_Os02g37580 | Os02g0588300 | - | Detail |
| C2H2g10114 | 2:21,393,111-21,398,859 | + | C1H2g17362 | CX2g021618 | LOC_Os02g37590 | Os02g0588500 | - | Detail |
| C2H2g01387 | 2:21,399,374-21,400,011 | + | C1H2g26477 | CX2g022481 | LOC_Os02g37600 | Os02g0588600 | - | Detail |
| C2H2g24202 | 2:21,417,057-21,418,232 | - | C1H2g09625 | - | LOC_Os02g37654 | Os02g0589000 | - | Detail |
| C2H2g17039 | 2:21,424,109-21,424,540 | - | C1H2g15747 | - | LOC_Os02g37654 | Os02g0589000 | - | Detail |
| C2H2g25126 | 2:21,433,241-21,434,548 | - | C1H2g17458 | CX2g024940 | LOC_Os02g37690 | Os02g0589400 | - | Detail |
| C2H2g17757 | 2:21,434,580-21,435,547 | - | C1H2g25460 | - | - | Os02g0589500 | - | Detail |
| C2H2g20236 | 2:21,447,750-21,449,550 | - | C1H2g04990 | - | LOC_Os02g37700 | Os02g0589700 | - | Detail |
| C2H2g19016 | 2:21,459,342-21,459,722 | - | C1H2g28333 | - | LOC_Os02g37760 | Os02g0590000 | - | Detail |
| C2H2g20437 | 2:21,463,523-21,464,259 | - | C1H2g06135 | - | LOC_Os02g37760 | Os02g0590400 | - | Detail |
| C2H2g00784 | 2:21,472,605-21,477,219 | - | C1H2g04235 | - | LOC_Os02g37780 | Os02g0590200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |