| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g16567 | 4:22,385,420-22,394,539 | + | C2H4g12957 | CX4g031530 | LOC_Os04g43350 | Os04g0513000 | - | Detail |
| C1H4g14420 | 4:22,396,187-22,400,156 | - | C2H4g12895 | - | LOC_Os04g43360 | Os04g0513100 | Os4BGlu14 | Detail |
| C1H4g08587 | 4:22,400,954-22,401,616 | - | - | - | - | - | - | Detail |
| C1H4g17289 | 4:22,403,401-22,403,721 | + | - | - | - | - | - | Detail |
| C1H4g08841 | 4:22,405,433-22,410,516 | - | C2H4g14566 | - | LOC_Os04g43390 | Os04g0513400 | - | Detail |
| C1H4g03090 | 4:22,418,042-22,423,546 | - | C2H4g12844 | - | LOC_Os04g43390 | Os04g0513400 | - | Detail |
| C1H4g31804 | 4:22,427,255-22,432,609 | - | C2H4g08699 | - | LOC_Os04g43410 | Os04g0513900 | Os4BGlu18 | Detail |
| C1H4g08265 | 4:22,436,842-22,439,017 | + | C2H4g06239 | CX4g035316 | LOC_Os04g43420 | Os04g0514400 | - | Detail |
| C1H4g12183 | 4:22,440,085-22,443,189 | - | C2H4g25755 | CX4g032808 | LOC_Os04g43430 | Os04g0514500 | - | Detail |
| C1H4g00643 | 4:22,444,384-22,451,296 | - | C2H4g28560 | CX4g032578 | LOC_Os04g43440 | Os04g0514600 | - | Detail |
| C1H4g05501 | 4:22,454,717-22,458,978 | - | C2H4g20498 | CX4g035553 | LOC_Os04g43490 | Os04g0514800 | - | Detail |
| C1H4g03273 | 4:22,469,596-22,471,765 | - | C2H4g19370 | CX4g034547 | LOC_Os02g40880 | Os04g0515300 | - | Detail |
| C1H4g25523 | 4:22,472,211-22,475,124 | + | C2H4g03762 | CX4g032382 | LOC_Os04g43550 | Os04g0515400 | - | Detail |
| C1H4g27910 | 4:22,488,951-22,491,346 | + | C2H4g24134 | CX4g031507 | LOC_Os04g43560 | Os04g0515900 | - | Detail |
| C1H4g02431 | 4:22,495,475-22,496,326 | - | C2H4g24189 | CX4g035165 | - | - | - | Detail |
| C1H4g12776 | 4:22,504,082-22,504,684 | - | C2H4g12828 | - | LOC_Os04g43580 | Os04g0516200 | OsG1L4 | Detail |
| C1H4g23819 | 4:22,525,358-22,527,918 | - | C2H4g21844 | CX4g034816 | LOC_Os04g43650 | Os04g0516600 | - | Detail |
| C1H4g30570 | 4:22,533,692-22,535,146 | + | C2H4g17407 | CX4g035460 | LOC_Os04g43660 | Os04g0516900 | - | Detail |
| C1H4g13624 | 4:22,535,995-22,537,726 | + | C2H4g08355 | CX4g032257 | LOC_Os04g43670 | Os04g0517000 | - | Detail |
| C1H4g07527 | 4:22,543,228-22,545,213 | - | C2H4g12515 | CX4g033299 | LOC_Os04g43680 | Os04g0517100 | OsMyb4, MYB55 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g20868 | 1:13,450,520-13,452,544 | - | - | - | - | Os01g0363950 | - | Detail |
| C2H1g23536 | 1:13,466,336-13,470,655 | + | C1H1g24145 | CX1g003575 | LOC_Os01g26174 | Os01g0364100 | - | Detail |
| C2H1g08431 | 1:13,500,059-13,502,591 | + | C1H1g15351 | CX1g003575 | LOC_Os01g26280 | Os01g0364800 | - | Detail |
| C2H1g01263 | 1:13,503,741-13,504,202 | - | - | CX1g006377 | - | - | - | Detail |
| C2H1g09218 | 1:13,511,084-13,513,790 | - | C1H1g00820 | CX1g000721 | LOC_Os01g26300 | Os01g0365000 | - | Detail |
| C2H1g10812 | 1:13,527,952-13,528,373 | - | C1H1g31120 | CX1g002129 | LOC_Os01g26310 | Os01g0365000 | - | Detail |
| C2H1g14612 | 1:13,547,883-13,550,252 | + | C1H1g24989 | CX1g000363 | LOC_Os01g26320 | Os01g0365300 | - | Detail |
| C2H1g19606 | 1:13,550,254-13,551,390 | + | C1H1g24989 | CX1g003444 | LOC_Os01g26320 | Os01g0365300 | - | Detail |
| C2H1g05597 | 1:13,561,516-13,563,405 | + | C1H1g13742 | CX1g002863 | LOC_Os01g26340 | Os01g0351500 | - | Detail |
| C2H1g01583 | 1:13,586,152-13,588,029 | + | - | - | - | Os10g0340100 | - | Detail |
| C2H1g08702 | 1:13,648,948-13,652,151 | + | C1H1g28775 | CX1g000084 | LOC_Os01g26390 | Os01g0366300 | Gnk2RLK-1 | Detail |
| C2H1g28276 | 1:13,653,448-13,655,490 | + | - | - | - | - | - | Detail |
| C2H1g18380 | 1:13,683,525-13,684,394 | - | C1H1g08262 | CX1g002303 | LOC_Os01g26920 | Os01g0367100 | - | Detail |
| C2H1g06533 | 1:13,687,142-13,688,920 | - | C1H1g25979 | CX1g004427 | LOC_Os01g26970 | Os01g0367100 | - | Detail |
| C2H1g18954 | 1:13,693,647-13,699,807 | - | C1H1g15445 | CX1g006237 | LOC_Os01g26940 | Os01g0367300 | - | Detail |
| C2H1g00335 | 1:13,704,344-13,708,942 | - | C1H1g15374 | CX1g002303 | LOC_Os01g26970 | Os01g0367400 | - | Detail |
| C2H1g03369 | 1:13,731,084-13,738,099 | + | C1H1g21458 | CX1g003934 | LOC_Os01g27020 | Os01g0367700 | - | Detail |
| C2H1g04184 | 1:13,745,523-13,752,855 | - | C1H1g24923 | CX1g006855 | LOC_Os01g27040 | Os01g0367900 | OsCHR728, CHR728, OsCHR11 | Detail |
| C2H1g05311 | 1:13,771,028-13,772,062 | + | C1H1g29900 | CX1g000728 | LOC_Os01g27100 | Os01g0368500 | - | Detail |
| C2H1g23898 | 1:13,791,146-13,803,780 | - | C1H1g21071 | CX1g002302 | LOC_Os01g27150 | Os01g0369000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |