| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g04057 | 4:21,743,110-21,744,310 | - | C2H4g25390 | CX4g031891 | LOC_Os04g42134 | Os04g0499200 | - | Detail |
| C1H4g00134 | 4:21,745,544-21,751,632 | - | C2H4g20172 | CX4g035111 | LOC_Os04g42140 | Os04g0499300 | RYMV1 | Detail |
| C1H4g24364 | 4:21,776,225-21,777,834 | + | C2H4g02845 | CX4g035561 | LOC_Os04g42160 | - | - | Detail |
| C1H4g04561 | 4:21,781,312-21,782,073 | - | C2H4g09516 | CX4g035616 | LOC_Os04g42200 | Os04g0500200 | - | Detail |
| C1H4g07100 | 4:21,782,950-21,783,623 | + | C2H4g21155 | CX4g034798 | LOC_Os04g42210 | Os04g0500300 | - | Detail |
| C1H4g19980 | 4:21,785,750-21,786,476 | + | C2H4g14569 | CX4g032419 | LOC_Os04g42220 | Os04g0500400 | - | Detail |
| C1H4g27904 | 4:21,798,165-21,803,858 | + | C2H4g14624 | CX4g033698 | LOC_Os04g42250 | Os04g0500700 | - | Detail |
| C1H4g03919 | 4:21,807,927-21,810,997 | + | C2H4g24343 | CX4g034952 | LOC_Os04g42260 | Os04g0500900 | - | Detail |
| C1H4g10006 | 4:21,812,568-21,814,450 | - | C2H4g19796 | CX4g034970 | LOC_Os04g42270 | Os04g0501000 | - | Detail |
| C1H4g23951 | 4:21,815,145-21,818,488 | + | C2H4g05530 | CX4g033035 | LOC_Os04g42280 | Os04g0501100 | - | Detail |
| C1H4g25280 | 4:21,820,409-21,823,671 | + | C2H4g16771 | CX4g036023 | LOC_Os04g42290 | Os04g0501200 | - | Detail |
| C1H4g15554 | 4:21,847,646-21,854,602 | - | C2H4g27535 | CX4g035234 | LOC_Os04g42320 | Os04g0501600 | - | Detail |
| C1H4g01323 | 4:21,859,782-21,865,956 | + | C2H4g15764 | CX4g034189 | LOC_Os04g42330 | Os04g0501700 | - | Detail |
| C1H4g00716 | 4:21,869,085-21,871,132 | + | C2H4g27962 | CX4g032700 | LOC_Os04g42340 | Os04g0501800 | - | Detail |
| C1H4g29745 | 4:21,876,784-21,879,214 | + | C2H4g27570 | CX4g034230 | LOC_Os04g42360 | Os04g0502100 | - | Detail |
| C1H4g31377 | 4:21,879,842-21,887,578 | + | C2H4g20801 | CX4g031888 | LOC_Os04g42370 | Os04g0502200 | - | Detail |
| C1H4g24462 | 4:21,890,487-21,892,370 | - | C2H4g21349 | CX4g036274 | LOC_Os04g42380 | Os04g0502300 | - | Detail |
| C1H4g11983 | 4:21,902,584-21,907,590 | + | C2H4g30598 | CX4g032715 | LOC_Os04g42420 | Os04g0502800 | - | Detail |
| C1H4g13189 | 4:21,911,459-21,911,986 | - | C2H7g12095 | CX7g046424 | LOC_Os04g25280 | - | - | Detail |
| C1H4g16599 | 4:21,915,279-21,919,332 | + | C2H4g04819 | CX4g031486 | LOC_Os04g42430 | Os04g0502900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g09631 | 9:8,006,927-8,008,614 | + | C1H9g27205 | CX9g057160 | LOC_Os09g15790 | Os09g0327100 | - | Detail |
| C2H9g08878 | 9:8,010,192-8,011,081 | - | C1H9g31109 | CX9g055621 | LOC_Os09g15780 | Os09g0327000 | - | Detail |
| C2H9g24688 | 9:8,014,892-8,016,244 | - | C1H9g09285 | CX9g055228 | LOC_Os09g15775 | Os09g0326900 | - | Detail |
| C2H9g12132 | 9:8,016,328-8,018,221 | - | - | - | - | - | - | Detail |
| C2H9g24003 | 9:8,020,742-8,023,525 | - | C1H9g17537 | - | LOC_Os09g15760 | Os09g0326850 | - | Detail |
| C2H9g25380 | 9:8,024,096-8,032,549 | - | C1H9g24231 | CX9g055311 | LOC_Os09g15750 | Os09g0326800 | OsRpn1a | Detail |
| C2H9g13951 | 9:8,049,916-8,053,048 | + | C1H9g01463 | CX9g055191 | LOC_Os09g15700 | Os09g0326100 | - | Detail |
| C2H9g17262 | 9:8,056,980-8,059,451 | + | - | CX9g056621 | - | - | - | Detail |
| C2H9g15972 | 9:8,059,488-8,059,682 | - | - | - | LOC_Os09g15680 | Os09g0325800 | - | Detail |
| C2H9g24883 | 9:8,062,332-8,063,402 | - | C1H9g06365 | CX9g056384 | LOC_Os09g15670 | Os09g0325700 | PP2C1, OsPP2C1, OsSIPP2C1, OsPP2C68, PP2C68, OsPP108 | Detail |
| C2H9g29577 | 9:8,063,432-8,063,764 | + | - | - | - | - | - | Detail |
| C2H9g09634 | 9:8,077,352-8,078,828 | + | C1H9g31373 | CX9g057751 | - | - | - | Detail |
| C2H9g19536 | 9:8,083,013-8,085,577 | + | C1H9g12543 | CX9g057751 | LOC_Os09g14660 | Os09g0325000 | - | Detail |
| C2H9g17279 | 9:8,088,916-8,089,320 | - | - | - | - | - | - | Detail |
| C2H9g14451 | 9:8,095,275-8,096,567 | - | C1H9g22857 | CX9g056577 | LOC_Os09g15560 | Os09g0324400 | - | Detail |
| C2H9g15142 | 9:8,099,495-8,100,904 | - | C1H9g22857 | CX9g056577 | LOC_Os09g15550 | Os09g0324300 | - | Detail |
| C2H9g08875 | 9:8,101,999-8,103,324 | - | C1H9g22857 | CX9g056577 | LOC_Os09g15540 | Os09g0324200 | - | Detail |
| C2H9g12849 | 9:8,105,486-8,105,962 | - | - | CX9g057572 | LOC_Os09g15520 | Os09g0324000 | - | Detail |
| C2H9g30451 | 9:8,113,176-8,114,257 | + | C1H9g26563 | CX9g055980 | LOC_Os09g15510 | Os09g0323700 | - | Detail |
| C2H9g24164 | 9:8,120,999-8,122,070 | - | C1H9g26563 | CX9g057171 | LOC_Os09g15500 | Os09g0323700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |