| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g21499 | 4:21,298,555-21,300,526 | - | C2H4g20138 | CX4g034396 | LOC_Os04g41160 | Os04g0488700 | - | Detail |
| C1H4g17621 | 4:21,310,882-21,319,249 | - | C2H4g16331 | CX4g033270 | LOC_Os04g41200 | Os04g0489100 | - | Detail |
| C1H4g14434 | 4:21,322,584-21,323,438 | - | C2H4g30667 | CX4g036668 | - | Os04g0489200 | - | Detail |
| C1H4g13969 | 4:21,327,950-21,337,846 | + | C2H4g29111 | CX4g034720 | LOC_Os04g41229 | Os04g0489600 | OsbHLH111, OsSGI1, HBP1 | Detail |
| C1H4g01937 | 4:21,347,284-21,350,802 | + | C2H4g26329 | CX4g033639 | LOC_Os04g41250 | Os04g0489800 | RHS1 | Detail |
| C1H4g19439 | 4:21,352,466-21,361,148 | + | C2H4g08737 | CX4g032470 | LOC_Os04g41260 | Os04g0490100 | - | Detail |
| C1H4g19266 | 4:21,367,735-21,375,459 | + | C2H4g11492 | CX4g034755 | LOC_Os04g41280 | Os04g0490300 | - | Detail |
| C1H4g25635 | 4:21,375,910-21,379,020 | - | C2H4g26467 | CX4g034054 | LOC_Os04g41300 | Os04g0490400 | - | Detail |
| C1H4g02046 | 4:21,382,625-21,385,396 | + | C2H4g17263 | CX4g036414 | LOC_Os04g41310 | Os04g0490500 | - | Detail |
| C1H4g27608 | 4:21,385,655-21,391,714 | - | C2H4g06465 | CX4g031476 | LOC_Os04g41320 | Os04g0490600 | - | Detail |
| C1H4g22577 | 4:21,402,732-21,405,311 | - | C2H4g18442 | CX4g031967 | LOC_Os04g41340 | Os04g0490800 | OsPGLP1 | Detail |
| C1H4g24056 | 4:21,409,497-21,411,304 | + | C2H4g17626 | CX4g036249 | LOC_Os04g41350 | Os04g0490900 | - | Detail |
| C1H4g24917 | 4:21,421,179-21,428,316 | - | C2H4g11306 | CX4g035441 | LOC_Os04g41400 | Os04g0491500 | - | Detail |
| C1H4g15315 | 4:21,434,196-21,437,308 | - | C2H4g18826 | CX4g036387 | LOC_Os04g41450 | Os04g0491500 | - | Detail |
| C1H4g21111 | 4:21,444,529-21,448,988 | - | C2H4g07651 | CX4g035327 | LOC_Os04g41460 | Os04g0491700 | OsINT1 | Detail |
| C1H4g17364 | 4:21,456,712-21,463,925 | + | C2H4g12997 | CX4g033387 | LOC_Os04g41470 | Os04g0492100 | - | Detail |
| C1H4g17746 | 4:21,467,483-21,478,314 | + | C2H4g29458 | CX4g034732 | LOC_Os04g41490 | Os04g0492300 | - | Detail |
| C1H4g27682 | 4:21,485,244-21,489,017 | + | C2H4g22787 | CX4g031686 | LOC_Os04g41500 | Os04g0492400 | - | Detail |
| C1H4g23200 | 4:21,489,393-21,504,636 | + | C2H4g27511 | CX4g036315 | LOC_Os04g41510 | Os04g0492500 | - | Detail |
| C1H4g21073 | 4:21,512,075-21,515,918 | + | C2H4g11011 | CX4g033186 | LOC_Os04g41550 | Os04g0492900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g19435 | 4:22,521,930-22,525,097 | + | C1H4g14520 | CX4g031957 | LOC_Os04g44110 | Os04g0521800 | - | Detail |
| C2H4g18486 | 4:22,525,268-22,525,756 | - | - | - | - | Os04g0521900 | - | Detail |
| C2H4g20077 | 4:22,534,017-22,534,349 | + | C1H4g13540 | CX4g034351 | LOC_Os04g44130 | Os04g0522100 | CAL2 | Detail |
| C2H4g17950 | 4:22,544,733-22,545,482 | - | C1H4g14130 | CX4g035905 | LOC_Os04g44150 | Os04g0522500 | GA2ox6, OsGA2ox6 | Detail |
| C2H4g23320 | 4:22,547,687-22,548,330 | - | C1H4g20746 | CX4g035905 | LOC_Os04g44150 | Os04g0522500 | GA2ox6, OsGA2ox6 | Detail |
| C2H4g07715 | 4:22,569,851-22,572,962 | + | C1H4g23550 | CX4g032754 | LOC_Os04g44190 | Os04g0522800 | - | Detail |
| C2H4g09820 | 4:22,574,353-22,575,002 | + | C1H4g25974 | CX4g032876 | LOC_Os04g44200 | Os04g0523000 | - | Detail |
| C2H4g17435 | 4:22,575,109-22,580,142 | - | C1H4g18322 | CX4g032188 | LOC_Os04g44210 | Os04g0523100 | - | Detail |
| C2H4g30482 | 4:22,586,419-22,588,702 | - | C1H4g27685 | CX4g033622 | LOC_Os04g44220 | Os04g0523200 | - | Detail |
| C2H4g08365 | 4:22,590,483-22,590,956 | - | C1H4g26193 | CX4g033622 | LOC_Os04g44220 | Os04g0523350 | - | Detail |
| C2H4g19772 | 4:22,595,491-22,595,874 | - | - | CX4g035364 | - | - | - | Detail |
| C2H4g21642 | 4:22,598,615-22,604,413 | + | C1H4g02749 | CX4g033677 | LOC_Os04g44230 | Os04g0523500 | OsCKX8 | Detail |
| C2H4g25107 | 4:22,607,303-22,608,808 | - | C1H4g16494 | CX4g034590 | LOC_Os04g44240 | Os04g0523600 | - | Detail |
| C2H4g28789 | 4:22,611,650-22,615,059 | - | C1H4g13330 | - | LOC_Os04g51490 | Os04g0132900 | - | Detail |
| C2H4g13084 | 4:22,618,354-22,620,895 | - | C1H4g19013 | CX4g035815 | LOC_Os01g62100 | - | - | Detail |
| C2H4g14631 | 4:22,624,546-22,626,720 | - | C1H4g16494 | CX4g034590 | LOC_Os04g44250 | Os04g0523600 | - | Detail |
| C2H4g00229 | 4:22,627,770-22,628,705 | + | - | - | LOC_Os04g44260 | Os04g0524136 | - | Detail |
| C2H4g21424 | 4:22,634,411-22,635,207 | + | C1H4g20304 | CX4g035143 | LOC_Os04g44280 | Os04g0524300 | RR5, rr5, OsRR5, Rra4, OsRRA4 | Detail |
| C2H4g00588 | 4:22,658,904-22,661,183 | + | C1H4g10194 | CX4g034041 | LOC_Os04g44290 | Os04g0524400 | - | Detail |
| C2H4g16476 | 4:22,662,716-22,666,298 | - | C1H4g06080 | CX4g031624 | LOC_Os04g44300 | Os04g0524500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |