| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g21499 | 4:21,298,555-21,300,526 | - | C2H4g20138 | CX4g034396 | LOC_Os04g41160 | Os04g0488700 | - | Detail |
| C1H4g17621 | 4:21,310,882-21,319,249 | - | C2H4g16331 | CX4g033270 | LOC_Os04g41200 | Os04g0489100 | - | Detail |
| C1H4g14434 | 4:21,322,584-21,323,438 | - | C2H4g30667 | CX4g036668 | - | Os04g0489200 | - | Detail |
| C1H4g13969 | 4:21,327,950-21,337,846 | + | C2H4g29111 | CX4g034720 | LOC_Os04g41229 | Os04g0489600 | OsbHLH111, OsSGI1, HBP1 | Detail |
| C1H4g01937 | 4:21,347,284-21,350,802 | + | C2H4g26329 | CX4g033639 | LOC_Os04g41250 | Os04g0489800 | RHS1 | Detail |
| C1H4g19439 | 4:21,352,466-21,361,148 | + | C2H4g08737 | CX4g032470 | LOC_Os04g41260 | Os04g0490100 | - | Detail |
| C1H4g19266 | 4:21,367,735-21,375,459 | + | C2H4g11492 | CX4g034755 | LOC_Os04g41280 | Os04g0490300 | - | Detail |
| C1H4g25635 | 4:21,375,910-21,379,020 | - | C2H4g26467 | CX4g034054 | LOC_Os04g41300 | Os04g0490400 | - | Detail |
| C1H4g02046 | 4:21,382,625-21,385,396 | + | C2H4g17263 | CX4g036414 | LOC_Os04g41310 | Os04g0490500 | - | Detail |
| C1H4g27608 | 4:21,385,655-21,391,714 | - | C2H4g06465 | CX4g031476 | LOC_Os04g41320 | Os04g0490600 | - | Detail |
| C1H4g22577 | 4:21,402,732-21,405,311 | - | C2H4g18442 | CX4g031967 | LOC_Os04g41340 | Os04g0490800 | OsPGLP1 | Detail |
| C1H4g24056 | 4:21,409,497-21,411,304 | + | C2H4g17626 | CX4g036249 | LOC_Os04g41350 | Os04g0490900 | - | Detail |
| C1H4g24917 | 4:21,421,179-21,428,316 | - | C2H4g11306 | CX4g035441 | LOC_Os04g41400 | Os04g0491500 | - | Detail |
| C1H4g15315 | 4:21,434,196-21,437,308 | - | C2H4g18826 | CX4g036387 | LOC_Os04g41450 | Os04g0491500 | - | Detail |
| C1H4g21111 | 4:21,444,529-21,448,988 | - | C2H4g07651 | CX4g035327 | LOC_Os04g41460 | Os04g0491700 | OsINT1 | Detail |
| C1H4g17364 | 4:21,456,712-21,463,925 | + | C2H4g12997 | CX4g033387 | LOC_Os04g41470 | Os04g0492100 | - | Detail |
| C1H4g17746 | 4:21,467,483-21,478,314 | + | C2H4g29458 | CX4g034732 | LOC_Os04g41490 | Os04g0492300 | - | Detail |
| C1H4g27682 | 4:21,485,244-21,489,017 | + | C2H4g22787 | CX4g031686 | LOC_Os04g41500 | Os04g0492400 | - | Detail |
| C1H4g23200 | 4:21,489,393-21,504,636 | + | C2H4g27511 | CX4g036315 | LOC_Os04g41510 | Os04g0492500 | - | Detail |
| C1H4g21073 | 4:21,512,075-21,515,918 | + | C2H4g11011 | CX4g033186 | LOC_Os04g41550 | Os04g0492900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g14560 | 9:18,510,240-18,511,177 | - | - | - | - | Os09g0551000 | - | Detail |
| C2H9g15560 | 9:18,511,260-18,519,351 | - | C1H9g00756 | CX9g057667 | LOC_Os09g37834 | Os09g0551000 | - | Detail |
| C2H9g18567 | 9:18,519,786-18,522,730 | - | C1H9g00756 | CX9g057667 | LOC_Os09g37840 | Os09g0551201 | SDK1 | Detail |
| C2H9g30036 | 9:18,524,325-18,526,305 | - | C1H9g14993 | CX9g057667 | LOC_Os09g37840 | Os09g0551201 | SDK1 | Detail |
| C2H9g10203 | 9:18,526,418-18,530,520 | - | C1H9g14993 | CX9g057667 | LOC_Os09g37840 | Os09g0551251 | SDK11 | Detail |
| C2H9g23601 | 9:18,536,271-18,541,647 | + | C1H9g23922 | CX9g055805 | LOC_Os09g37860 | Os09g0551300 | - | Detail |
| C2H9g18325 | 9:18,549,604-18,553,469 | + | C1H9g22027 | CX9g057667 | LOC_Os09g37840 | Os09g0551400 | SDRLK-42 | Detail |
| C2H9g05665 | 9:18,554,819-18,560,466 | - | C1H9g23767 | CX9g057667 | LOC_Os09g37840 | Os09g0551500 | SDRLK-43 | Detail |
| C2H9g09248 | 9:18,564,920-18,566,709 | + | C1H9g20157 | CX9g055996 | LOC_Os09g37910 | Os09g0551600 | - | Detail |
| C2H9g00765 | 9:18,568,706-18,576,273 | - | C1H9g09501 | CX9g055169 | LOC_Os09g37920 | Os09g0551800 | - | Detail |
| C2H9g18827 | 9:18,576,747-18,585,978 | - | C1H9g15933 | CX9g057646 | LOC_Os09g37930 | - | - | Detail |
| C2H9g26371 | 9:18,591,347-18,594,122 | - | C1H9g08089 | CX9g054990 | LOC_Os09g37949 | Os09g0552300 | - | Detail |
| C2H9g23182 | 9:18,597,456-18,599,241 | - | C1H9g25273 | CX9g055948 | LOC_Os09g37958 | Os09g0552600 | - | Detail |
| C2H9g28554 | 9:18,601,445-18,602,602 | - | C1H9g09840 | CX9g056393 | LOC_Os09g37976 | Os09g0552600 | - | Detail |
| C2H9g14226 | 9:18,606,239-18,608,507 | + | C1H9g15676 | CX9g054872 | LOC_Os09g38000 | Os09g0552800 | OsNAC109, YL3 | Detail |
| C2H9g12533 | 9:18,611,084-18,613,215 | + | C1H9g26813 | CX9g057788 | LOC_Os09g38010 | Os09g0552900 | - | Detail |
| C2H9g10941 | 9:18,620,794-18,625,942 | + | C1H9g17635 | CX9g055376 | LOC_Os09g38030 | Os09g0553200 | UGP1, Ugp1, OsUgp1, UGP2, UGP3 | Detail |
| C2H9g21953 | 9:18,626,744-18,629,492 | - | C1H9g26934 | CX9g058064 | LOC_Os09g38040 | Os09g0553300 | - | Detail |
| C2H9g19006 | 9:18,634,233-18,638,099 | + | C1H9g10869 | CX9g056104 | LOC_Os09g38060 | Os09g0553600 | - | Detail |
| C2H9g11910 | 9:18,640,615-18,641,481 | - | C1H9g05696 | - | LOC_Os09g38070 | Os09g0553700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |