| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g23173 | 4:20,134,233-20,137,730 | + | C2H4g15046 | CX4g031560 | LOC_Os04g38870 | Os04g0462500 | - | Detail |
| C1H4g05269 | 4:20,138,431-20,140,481 | - | C2H4g09025 | CX4g033001 | LOC_Os04g38880 | Os04g0462600 | - | Detail |
| C1H4g30627 | 4:20,146,849-20,147,703 | - | C2H4g27908 | CX4g034025 | LOC_Os04g38900 | Os04g0462900 | - | Detail |
| C1H4g28569 | 4:20,149,829-20,152,398 | - | C2H4g10984 | CX4g032418 | LOC_Os04g38910 | Os04g0463000 | - | Detail |
| C1H4g14030 | 4:20,158,006-20,158,918 | - | - | - | - | - | - | Detail |
| C1H4g28377 | 4:20,163,434-20,164,307 | - | C2H4g23255 | CX4g034571 | LOC_Os09g23300 | Os04g0463400 | OsVIT1;2 OsVIT1 | Detail |
| C1H4g31445 | 4:20,165,453-20,165,896 | - | C2H4g07912 | CX4g034571 | LOC_Os04g38940 | Os04g0463400 | OsVIT1;2 OsVIT1 | Detail |
| C1H4g09561 | 4:20,169,229-20,172,624 | - | C2H4g28763 | CX4g036538 | LOC_Os04g38950 | Os04g0463500 | TDD1, OASB1 | Detail |
| C1H4g11967 | 4:20,174,541-20,177,039 | + | C2H4g28177 | CX4g033159 | LOC_Os04g38960 | Os04g0463600 | - | Detail |
| C1H4g05080 | 4:20,179,690-20,181,500 | - | C2H4g13162 | CX4g033067 | LOC_Os04g38970 | Os04g0463700 | - | Detail |
| C1H4g02516 | 4:20,181,910-20,188,388 | - | C2H4g07932 | CX4g036672 | LOC_Os04g38980 | Os04g0463800 | - | Detail |
| C1H4g21091 | 4:20,199,235-20,199,681 | - | - | - | - | - | - | Detail |
| C1H4g01794 | 4:20,200,816-20,205,566 | - | C2H4g13985 | CX4g032487 | LOC_Os04g39020 | Os04g0464200 | BAD1, Badh1, badh1, BAD1, BADH1, OsBADH1, BADH | Detail |
| C1H4g07451 | 4:20,208,347-20,212,309 | - | C2H4g00984 | CX4g035491 | LOC_Os04g39030 | Os04g0464400 | - | Detail |
| C1H4g23214 | 4:20,215,020-20,219,987 | + | C2H4g04170 | CX4g031502 | LOC_Os04g39040 | Os04g0464500 | - | Detail |
| C1H4g17346 | 4:20,223,164-20,223,448 | - | C2H4g17707 | - | - | - | - | Detail |
| C1H4g20578 | 4:20,230,246-20,230,536 | - | C2H4g26653 | CX4g036034 | - | - | - | Detail |
| C1H4g22118 | 4:20,242,943-20,249,032 | - | C2H4g00542 | CX4g035608 | LOC_Os04g39060 | Os04g0464800 | OsCFM2 | Detail |
| C1H4g16307 | 4:20,253,424-20,254,077 | - | C2H4g07256 | - | - | Os07g0567801 | - | Detail |
| C1H4g10402 | 4:20,258,867-20,259,130 | + | - | - | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g24824 | 2:3,441,001-3,443,616 | - | C1H2g22189 | CX2g024836 | LOC_Os02g07670 | Os02g0173000 | - | Detail |
| C2H2g00550 | 2:3,446,779-3,453,230 | + | C1H2g28731 | CX2g022349 | LOC_Os02g07680 | Os02g0173100 | - | Detail |
| C2H2g04564 | 2:3,466,591-3,470,581 | + | C1H2g05749 | CX2g021850 | LOC_Os02g07720 | Os02g0173500 | - | Detail |
| C2H2g25488 | 2:3,473,477-3,474,885 | + | C1H2g20583 | CX2g022008 | LOC_Os02g07730 | Os02g0173600 | - | Detail |
| C2H2g25277 | 2:3,475,547-3,479,727 | + | C1H2g11719 | CX2g022408 | LOC_Os02g07740 | Os02g0173700 | - | Detail |
| C2H2g05358 | 2:3,479,779-3,483,687 | - | C1H2g13144 | CX2g019306 | LOC_Os02g07750 | Os02g0173800 | - | Detail |
| C2H2g15147 | 2:3,485,820-3,493,530 | + | C1H2g30476 | CX2g022443 | LOC_Os02g07760 | Os02g0173900 | - | Detail |
| C2H2g30059 | 2:3,499,284-3,501,532 | - | C1H2g17525 | CX2g021568 | LOC_Os02g07770 | Os02g0174000 | OsAPL | Detail |
| C2H2g18280 | 2:3,514,516-3,518,041 | + | C1H2g14780 | CX2g018842 | LOC_Os02g07780 | Os02g0174100 | - | Detail |
| C2H2g26229 | 2:3,519,233-3,522,261 | - | C1H2g19613 | CX2g023354 | LOC_Os02g07790 | Os02g0174200 | OsDPK2 | Detail |
| C2H2g20308 | 2:3,523,498-3,525,979 | + | C1H2g30350 | CX2g022416 | LOC_Os02g07800 | Os02g0174300 | - | Detail |
| C2H2g01221 | 2:3,526,704-3,529,643 | + | C1H2g08878 | CX2g024880 | LOC_Os02g07810 | Os02g0174400 | - | Detail |
| C2H2g00728 | 2:3,535,527-3,537,625 | + | C1H2g02250 | CX2g023598 | LOC_Os02g07820 | Os02g0174800 | - | Detail |
| C2H2g16638 | 2:3,540,178-3,543,174 | + | C1H2g14484 | CX2g023627 | LOC_Os02g07830 | Os02g0175000 | HKT6, OsHKT6, OsHKT1;3 | Detail |
| C2H2g09018 | 2:3,548,013-3,550,777 | + | C1H2g18593 | CX2g020712 | LOC_Os02g07840 | Os02g0175100 | RISBZ4 | Detail |
| C2H2g04831 | 2:3,551,235-3,554,184 | - | C1H2g09443 | CX2g023186 | LOC_Os02g07850 | Os02g0175200 | - | Detail |
| C2H2g15931 | 2:3,560,500-3,567,958 | + | C1H2g02033 | CX2g019528 | LOC_Os02g07870 | Os02g0175400 | - | Detail |
| C2H2g27332 | 2:3,569,517-3,574,214 | + | - | - | - | - | - | Detail |
| C2H2g23705 | 2:3,579,835-3,583,643 | - | C1H2g07080 | CX2g019494 | LOC_Os02g07900 | Os02g0175700 | OsANTH3 | Detail |
| C2H2g17525 | 2:3,584,868-3,586,687 | + | C1H2g29388 | CX2g023593 | LOC_Os02g07910 | Os02g0175800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |